RNA–Protein interactions for RNA: ENST00000636816.1

CACNA1A-231, Transcript of calcium voltage-gated channel subunit alpha1 A, human

TSL 5

Gene CACNA1A, Length 1,978 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-231	ENST00000636816	DLGAP5	Q15398	846 aa		18.23	■□□□□ 0.51
CACNA1A-231	ENST00000636816	UPF1	Q92900	1129 aa	Known RBP eCLIP	18.23	■□□□□ 0.51
CACNA1A-231	ENST00000636816	LZTS2	Q9BRK4	669 aa		18.23	■□□□□ 0.51
CACNA1A-231	ENST00000636816	BCS1L	Q9Y276	419 aa		18.23	■□□□□ 0.51
CACNA1A-231	ENST00000636816	ENTPD3	O75355	529 aa		18.22	■□□□□ 0.51
CACNA1A-231	ENST00000636816	PTGER2	P43116	358 aa		18.22	■□□□□ 0.51
CACNA1A-231	ENST00000636816	JAG1	P78504	1218 aa		18.22	■□□□□ 0.51
CACNA1A-231	ENST00000636816	CERKL	Q49MI3	558 aa	Predicted RBP	18.22	■□□□□ 0.51
CACNA1A-231	ENST00000636816	SPECC1	Q5M775	1068 aa		18.22	■□□□□ 0.51
CACNA1A-231	ENST00000636816	HEATR3	Q7Z4Q2	680 aa		18.22	■□□□□ 0.51
CACNA1A-231	ENST00000636816	FOXP4	Q8IVH2	680 aa	Predicted RBP	18.22	■□□□□ 0.51
CACNA1A-231	ENST00000636816	SPZ1	Q9BXG8	430 aa		18.22	■□□□□ 0.51
CACNA1A-231	ENST00000636816	TAOK3	Q9H2K8	898 aa		18.22	■□□□□ 0.51
CACNA1A-231	ENST00000636816	GPCPD1	Q9NPB8	672 aa		18.22	■□□□□ 0.51
CACNA1A-231	ENST00000636816	ZNF70	Q9UC06	446 aa	Predicted RBP	18.22	■□□□□ 0.51
CACNA1A-231	ENST00000636816	RRP1B	Q14684	758 aa	Known RBP	18.22	■□□□□ 0.51
CACNA1A-231	ENST00000636816	TATDN1	Q6P1N9	297 aa		18.22	■□□□□ 0.51
CACNA1A-231	ENST00000636816	HOMER1	Q86YM7	354 aa		18.22	■□□□□ 0.51
CACNA1A-231	ENST00000636816	OGFOD1	Q8N543	542 aa		18.22	■□□□□ 0.51
CACNA1A-231	ENST00000636816	JMY	Q8N9B5	988 aa		18.22	■□□□□ 0.51
CACNA1A-231	ENST00000636816	RASGRP4	Q8TDF6	673 aa		18.22	■□□□□ 0.51
CACNA1A-231	ENST00000636816	CCDC17	Q96LX7	622 aa		18.22	■□□□□ 0.51
CACNA1A-231	ENST00000636816	BRMS1	Q9HCU9	246 aa		18.22	■□□□□ 0.51
CACNA1A-231	ENST00000636816	HDAC9	Q9UKV0	1011 aa		18.22	■□□□□ 0.51
CACNA1A-231	ENST00000636816		A0A087WWV3	80 aa		18.21	■□□□□ 0.51
CACNA1A-231	ENST00000636816	STXBP3	O00186	592 aa		18.21	■□□□□ 0.51
CACNA1A-231	ENST00000636816	CUTA	O60888	179 aa		18.21	■□□□□ 0.51
CACNA1A-231	ENST00000636816	ZNF202	O95125	648 aa		18.21	■□□□□ 0.51
CACNA1A-231	ENST00000636816	GDF11	O95390	407 aa		18.21	■□□□□ 0.51
CACNA1A-231	ENST00000636816	PIK3AP1	Q6ZUJ8	805 aa		18.21	■□□□□ 0.51
CACNA1A-231	ENST00000636816	PIGS	Q96S52	555 aa		18.21	■□□□□ 0.51
CACNA1A-231	ENST00000636816	SH3GLB2	Q9NR46	395 aa		18.21	■□□□□ 0.51
CACNA1A-231	ENST00000636816	FBXO2	Q9UK22	296 aa	Predicted RBP	18.21	■□□□□ 0.51
CACNA1A-231	ENST00000636816	SNHG28	P0DPA3	235 aa		18.21	■□□□□ 0.5
CACNA1A-231	ENST00000636816	SEPT2	Q15019	361 aa		18.21	■□□□□ 0.5
CACNA1A-231	ENST00000636816	ZNF174	Q15697	407 aa		18.21	■□□□□ 0.5
CACNA1A-231	ENST00000636816	METTL16	Q86W50	562 aa	Known RBP	18.21	■□□□□ 0.5
CACNA1A-231	ENST00000636816	SIAH1	Q8IUQ4	282 aa		18.21	■□□□□ 0.5
CACNA1A-231	ENST00000636816	BLID	Q8IZY5	108 aa		18.21	■□□□□ 0.5
CACNA1A-231	ENST00000636816	TRIM34	Q9BYJ4	488 aa		18.21	■□□□□ 0.5
CACNA1A-231	ENST00000636816	BARHL2	Q9NY43	387 aa		18.21	■□□□□ 0.5
CACNA1A-231	ENST00000636816	ATRNL1	Q5VV63	1379 aa		18.2	■□□□□ 0.5
CACNA1A-231	ENST00000636816	TRIM75P	A6NK02	468 aa		18.2	■□□□□ 0.5
CACNA1A-231	ENST00000636816	EEF2	P13639	858 aa	Known RBP	18.2	■□□□□ 0.5
CACNA1A-231	ENST00000636816	RESP18	Q5W5W9	173 aa		18.2	■□□□□ 0.5
CACNA1A-231	ENST00000636816	TTBK2	Q6IQ55	1244 aa		18.2	■□□□□ 0.5
CACNA1A-231	ENST00000636816	KRI1	Q8N9T8	703 aa	Known RBP	18.2	■□□□□ 0.5
CACNA1A-231	ENST00000636816	CSRNP1	Q96S65	589 aa		18.2	■□□□□ 0.5
CACNA1A-231	ENST00000636816	PCDHA4	Q9UN74	947 aa		18.2	■□□□□ 0.5
CACNA1A-231	ENST00000636816	HPSE	Q9Y251	543 aa		18.2	■□□□□ 0.5
CACNA1A-231	ENST00000636816	CD2AP	Q9Y5K6	639 aa		18.2	■□□□□ 0.5
CACNA1A-231	ENST00000636816	PTPRE	P23469	700 aa		18.19	■□□□□ 0.5
CACNA1A-231	ENST00000636816	PRELP	P51888	382 aa		18.19	■□□□□ 0.5
CACNA1A-231	ENST00000636816	RASSF7	Q02833	373 aa		18.19	■□□□□ 0.5
CACNA1A-231	ENST00000636816	ANO6	Q4KMQ2	910 aa		18.19	■□□□□ 0.5
CACNA1A-231	ENST00000636816	CIAPIN1	Q6FI81	312 aa		18.19	■□□□□ 0.5
CACNA1A-231	ENST00000636816	SASS6	Q6UVJ0	657 aa		18.19	■□□□□ 0.5
CACNA1A-231	ENST00000636816	CDAN1	Q8IWY9	1227 aa		18.19	■□□□□ 0.5
CACNA1A-231	ENST00000636816	AGBL3	Q8NEM8	1001 aa		18.19	■□□□□ 0.5
CACNA1A-231	ENST00000636816	NLGN2	Q8NFZ4	835 aa		18.19	■□□□□ 0.5
CACNA1A-231	ENST00000636816	RRP36	Q96EU6	259 aa	Known RBP	18.19	■□□□□ 0.5
CACNA1A-231	ENST00000636816	PPP1R9B	Q96SB3	815 aa		18.19	■□□□□ 0.5
CACNA1A-231	ENST00000636816	SDF4	Q9BRK5	362 aa		18.19	■□□□□ 0.5
CACNA1A-231	ENST00000636816	RIOX1	Q9H6W3	641 aa		18.19	■□□□□ 0.5
CACNA1A-231	ENST00000636816	CNTNAP1	P78357	1384 aa		18.19	■□□□□ 0.5
CACNA1A-231	ENST00000636816		M0R2N6	131 aa		18.19	■□□□□ 0.5
CACNA1A-231	ENST00000636816	CTAGE5	O15320	804 aa		18.19	■□□□□ 0.5
CACNA1A-231	ENST00000636816	SMARCA1	P28370	1054 aa		18.19	■□□□□ 0.5
CACNA1A-231	ENST00000636816	SPDYE2	Q495Y8	402 aa		18.19	■□□□□ 0.5
CACNA1A-231	ENST00000636816	ASPRV1	Q53RT3	343 aa		18.19	■□□□□ 0.5
CACNA1A-231	ENST00000636816	JDP2	Q8WYK2	163 aa		18.19	■□□□□ 0.5
CACNA1A-231	ENST00000636816	VEZT	Q9HBM0	779 aa		18.19	■□□□□ 0.5
CACNA1A-231	ENST00000636816	TMOD2	Q9NZR1	351 aa		18.19	■□□□□ 0.5
CACNA1A-231	ENST00000636816	CALML3	P27482	149 aa		18.18	■□□□□ 0.5
CACNA1A-231	ENST00000636816	ZNF543	Q08ER8	600 aa		18.18	■□□□□ 0.5
CACNA1A-231	ENST00000636816	NBPF9	Q3BBW0	867 aa		18.18	■□□□□ 0.5
CACNA1A-231	ENST00000636816	TTC38	Q5R3I4	469 aa		18.18	■□□□□ 0.5
CACNA1A-231	ENST00000636816	KCTD1	Q719H9	257 aa		18.18	■□□□□ 0.5
CACNA1A-231	ENST00000636816	ANP32B	Q92688	251 aa	Known RBP	18.18	■□□□□ 0.5
CACNA1A-231	ENST00000636816	PCDHA6	Q9UN73	950 aa		18.18	■□□□□ 0.5
CACNA1A-231	ENST00000636816	SCAF8	Q9UPN6	1271 aa	Known RBP	18.18	■□□□□ 0.5
CACNA1A-231	ENST00000636816	PCDHA8	Q9Y5H6	950 aa		18.18	■□□□□ 0.5
CACNA1A-231	ENST00000636816	SLC16A2	P36021	539 aa		18.17	■□□□□ 0.5
CACNA1A-231	ENST00000636816	SYK	P43405	635 aa		18.17	■□□□□ 0.5
CACNA1A-231	ENST00000636816	CCDC173	Q0VFZ6	552 aa		18.17	■□□□□ 0.5
CACNA1A-231	ENST00000636816	ABCB5	Q2M3G0	1257 aa		18.17	■□□□□ 0.5
CACNA1A-231	ENST00000636816	FAM151A	Q8WW52	585 aa		18.17	■□□□□ 0.5
CACNA1A-231	ENST00000636816	NOL7	Q9UMY1	257 aa	Known RBP	18.17	■□□□□ 0.5
CACNA1A-231	ENST00000636816	SRPRB	Q9Y5M8	271 aa	Known RBP	18.17	■□□□□ 0.5
CACNA1A-231	ENST00000636816	FAM237A	A0A1B0GTK4	181 aa		18.17	■□□□□ 0.5
CACNA1A-231	ENST00000636816	RAD21	O60216	631 aa		18.17	■□□□□ 0.5
CACNA1A-231	ENST00000636816	NAPA	P54920	295 aa		18.17	■□□□□ 0.5
CACNA1A-231	ENST00000636816	USP49	Q70CQ1	688 aa		18.17	■□□□□ 0.5
CACNA1A-231	ENST00000636816	DNAJC25	Q9H1X3	360 aa		18.17	■□□□□ 0.5
CACNA1A-231	ENST00000636816	KANSL2	Q9H9L4	492 aa		18.17	■□□□□ 0.5
CACNA1A-231	ENST00000636816	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	18.17	■□□□□ 0.5
CACNA1A-231	ENST00000636816	CEP131	Q9UPN4	1083 aa		18.17	■□□□□ 0.5
CACNA1A-231	ENST00000636816	EGFR	P00533	1210 aa		18.16	■□□□□ 0.5
CACNA1A-231	ENST00000636816	GH2	P01242	217 aa		18.16	■□□□□ 0.5
CACNA1A-231	ENST00000636816	UVSSA	Q2YD98	709 aa		18.16	■□□□□ 0.5

Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms