RNA–Protein interactions for RNA: ENST00000636603.1

CHRNA7-217, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5 BASIC

Gene CHRNA7, Length 2,012 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-217ENST00000636603 SRBD1Q8N5C6 995 aaKnown RBP17.76■□□□□ 0.43
CHRNA7-217ENST00000636603 CTCFLQ8NI51 663 aaPredicted RBP17.76■□□□□ 0.43
CHRNA7-217ENST00000636603 TTC12Q9H892 705 aaPredicted RBP17.76■□□□□ 0.43
CHRNA7-217ENST00000636603 DACT1Q9NYF0 836 aa17.76■□□□□ 0.43
CHRNA7-217ENST00000636603 USP17L5A8MUK1 530 aa17.75■□□□□ 0.43
CHRNA7-217ENST00000636603 RAD21O60216 631 aa17.75■□□□□ 0.43
CHRNA7-217ENST00000636603 CALM1P0DP23 149 aa17.75■□□□□ 0.43
CHRNA7-217ENST00000636603 CALM2P0DP24 149 aa17.75■□□□□ 0.43
CHRNA7-217ENST00000636603 CALM3P0DP25 149 aa17.75■□□□□ 0.43
CHRNA7-217ENST00000636603 IFNAR1P17181 557 aa17.75■□□□□ 0.43
CHRNA7-217ENST00000636603 EPHX2P34913 555 aa17.75■□□□□ 0.43
CHRNA7-217ENST00000636603 RCAN1P53805 252 aa17.75■□□□□ 0.43
CHRNA7-217ENST00000636603 FUT2Q10981 343 aa17.75■□□□□ 0.43
CHRNA7-217ENST00000636603 CPLX2Q6PUV4 134 aaKnown RBP17.75■□□□□ 0.43
CHRNA7-217ENST00000636603 TMEM179Q6ZVK1 233 aa17.75■□□□□ 0.43
CHRNA7-217ENST00000636603 NUP62CLQ9H1M0 184 aa17.75■□□□□ 0.43
CHRNA7-217ENST00000636603 MAD2L2Q9UI95 211 aa17.75■□□□□ 0.43
CHRNA7-217ENST00000636603 PHF20L1A8MW92 1017 aa17.74■□□□□ 0.43
CHRNA7-217ENST00000636603 ADM5C9JUS6 153 aa17.74■□□□□ 0.43
CHRNA7-217ENST00000636603 MAP3K10Q02779 954 aa17.74■□□□□ 0.43
CHRNA7-217ENST00000636603 ICA1Q05084 483 aa17.74■□□□□ 0.43
CHRNA7-217ENST00000636603 SSRP1Q08945 709 aaKnown RBP17.74■□□□□ 0.43
CHRNA7-217ENST00000636603 TMTC3Q6ZXV5 915 aa17.74■□□□□ 0.43
CHRNA7-217ENST00000636603 CABP5Q9NP86 173 aa17.74■□□□□ 0.43
CHRNA7-217ENST00000636603 FRMPD2Q68DX3 1309 aaPredicted RBP17.74■□□□□ 0.43
CHRNA7-217ENST00000636603 CCDC196A0A1B0GTZ2 297 aa17.74■□□□□ 0.43
CHRNA7-217ENST00000636603 CDKL5O76039 1030 aa17.74■□□□□ 0.43
CHRNA7-217ENST00000636603 FMNL1O95466 1100 aaPredicted RBP17.74■□□□□ 0.43
CHRNA7-217ENST00000636603 CCDC192P0DO97 292 aa17.74■□□□□ 0.43
CHRNA7-217ENST00000636603 TYRO3Q06418 890 aa17.74■□□□□ 0.43
CHRNA7-217ENST00000636603 GRM4Q14833 912 aa17.74■□□□□ 0.43
CHRNA7-217ENST00000636603 MAP3K11Q16584 847 aa17.74■□□□□ 0.43
CHRNA7-217ENST00000636603 SLC35G1Q2M3R5 365 aa17.74■□□□□ 0.43
CHRNA7-217ENST00000636603 EAPPQ56P03 285 aaPredicted RBP17.74■□□□□ 0.43
CHRNA7-217ENST00000636603 KANSL2Q9H9L4 492 aa17.74■□□□□ 0.43
CHRNA7-217ENST00000636603 CAP2P40123 477 aa17.73■□□□□ 0.43
CHRNA7-217ENST00000636603 PRKG1Q13976 671 aa17.73■□□□□ 0.43
CHRNA7-217ENST00000636603 ALG1Q9BT22 464 aa17.73■□□□□ 0.43
CHRNA7-217ENST00000636603 RBM28Q9NW13 759 aaKnown RBP17.73■□□□□ 0.43
CHRNA7-217ENST00000636603 ZBTB21Q9ULJ3 1066 aa17.73■□□□□ 0.43
CHRNA7-217ENST00000636603 V9GY48 417 aaPredicted RBP17.73■□□□□ 0.43
CHRNA7-217ENST00000636603 A0A1W2PRG0 241 aa17.72■□□□□ 0.43
CHRNA7-217ENST00000636603 NR1I2O75469 434 aa17.72■□□□□ 0.43
CHRNA7-217ENST00000636603 PDHBP11177 359 aa17.72■□□□□ 0.43
CHRNA7-217ENST00000636603 VEGFAP15692 232 aaPredicted RBP17.72■□□□□ 0.43
CHRNA7-217ENST00000636603 ECE1P42892 770 aa17.72■□□□□ 0.43
CHRNA7-217ENST00000636603 DCPSQ96C86 337 aaKnown RBP17.72■□□□□ 0.43
CHRNA7-217ENST00000636603 CLSTN2Q9H4D0 955 aa17.72■□□□□ 0.43
CHRNA7-217ENST00000636603 MYH6P13533 1939 aa17.72■□□□□ 0.43
CHRNA7-217ENST00000636603 ZC3H4Q9UPT8 1303 aaKnown RBP17.72■□□□□ 0.43
CHRNA7-217ENST00000636603 H3BQV1 296 aa17.72■□□□□ 0.43
CHRNA7-217ENST00000636603 RRP9O43818 475 aaKnown RBP17.72■□□□□ 0.43
CHRNA7-217ENST00000636603 POTEIP0CG38 1075 aa17.72■□□□□ 0.43
CHRNA7-217ENST00000636603 POTEJP0CG39 1038 aa17.72■□□□□ 0.43
CHRNA7-217ENST00000636603 INPP5BP32019 993 aa17.72■□□□□ 0.43
CHRNA7-217ENST00000636603 IFFO2Q5TF58 517 aa17.72■□□□□ 0.43
CHRNA7-217ENST00000636603 CKAP2LQ8IYA6 745 aa17.72■□□□□ 0.43
CHRNA7-217ENST00000636603 C17orf53Q8N3J3 647 aaPredicted RBP17.72■□□□□ 0.43
CHRNA7-217ENST00000636603 ACER1Q8TDN7 264 aa17.72■□□□□ 0.43
CHRNA7-217ENST00000636603 GLIS2Q9BZE0 524 aaPredicted RBP17.72■□□□□ 0.43
CHRNA7-217ENST00000636603 KCNF1Q9H3M0 494 aa17.72■□□□□ 0.43
CHRNA7-217ENST00000636603 TAF1DQ9H5J8 278 aaPredicted RBP17.72■□□□□ 0.43
CHRNA7-217ENST00000636603 PALM3A6NDB9 673 aaPredicted RBP17.71■□□□□ 0.43
CHRNA7-217ENST00000636603 KIF5BP33176 963 aa17.71■□□□□ 0.43
CHRNA7-217ENST00000636603 FAM200AQ8TCP9 573 aa17.71■□□□□ 0.43
CHRNA7-217ENST00000636603 C8orf76Q96K31 380 aa17.71■□□□□ 0.43
CHRNA7-217ENST00000636603 UBA5Q9GZZ9 404 aa17.71■□□□□ 0.43
CHRNA7-217ENST00000636603 GPCPD1Q9NPB8 672 aa17.71■□□□□ 0.43
CHRNA7-217ENST00000636603 NYAP2Q9P242 653 aa17.71■□□□□ 0.43
CHRNA7-217ENST00000636603 CNTNAP5Q8WYK1 1306 aa17.71■□□□□ 0.43
CHRNA7-217ENST00000636603 KLRF2D3W0D1 207 aa17.71■□□□□ 0.42
CHRNA7-217ENST00000636603 CYTH3O43739 400 aa17.71■□□□□ 0.42
CHRNA7-217ENST00000636603 PARP1P09874 1014 aaKnown RBP17.71■□□□□ 0.42
CHRNA7-217ENST00000636603 PPP2R5BQ15173 497 aa17.71■□□□□ 0.42
CHRNA7-217ENST00000636603 PKN1Q16512 942 aa17.71■□□□□ 0.42
CHRNA7-217ENST00000636603 USP50Q70EL3 339 aaPredicted RBP17.71■□□□□ 0.42
CHRNA7-217ENST00000636603 TNMDQ9H2S6 317 aa17.71■□□□□ 0.42
CHRNA7-217ENST00000636603 SSC5DA1L4H1 1573 aa17.7■□□□□ 0.42
CHRNA7-217ENST00000636603 HSP90AA2PQ14568 343 aaPredicted RBP17.7■□□□□ 0.42
CHRNA7-217ENST00000636603 TTBK2Q6IQ55 1244 aa17.7■□□□□ 0.42
CHRNA7-217ENST00000636603 KCTD1Q719H9 257 aa17.7■□□□□ 0.42
CHRNA7-217ENST00000636603 KRT26Q7Z3Y9 468 aa17.7■□□□□ 0.42
CHRNA7-217ENST00000636603 SULF1Q8IWU6 871 aa17.7■□□□□ 0.42
CHRNA7-217ENST00000636603 TRIM22Q8IYM9 498 aa17.7■□□□□ 0.42
CHRNA7-217ENST00000636603 ZKSCAN4Q969J2 545 aaPredicted RBP17.7■□□□□ 0.42
CHRNA7-217ENST00000636603 MKL1Q969V6 931 aa17.7■□□□□ 0.42
CHRNA7-217ENST00000636603 SHISA4Q96DD7 197 aa17.7■□□□□ 0.42
CHRNA7-217ENST00000636603 ZSCAN16Q9H4T2 348 aaPredicted RBP17.7■□□□□ 0.42
CHRNA7-217ENST00000636603 DDX19AQ9NUU7 478 aaKnown RBP17.7■□□□□ 0.42
CHRNA7-217ENST00000636603 NOLC1Q14978 699 aaKnown RBP eCLIP17.69■□□□□ 0.42
CHRNA7-217ENST00000636603 ZYXQ15942 572 aaKnown RBP17.69■□□□□ 0.42
CHRNA7-217ENST00000636603 LUZP1Q86V48 1076 aa17.69■□□□□ 0.42
CHRNA7-217ENST00000636603 SPICE1Q8N0Z3 855 aa17.69■□□□□ 0.42
CHRNA7-217ENST00000636603 MAP3K14Q99558 947 aa17.69■□□□□ 0.42
CHRNA7-217ENST00000636603 NUP88Q99567 741 aaPredicted RBP17.69■□□□□ 0.42
CHRNA7-217ENST00000636603 FTOQ9C0B1 505 aaKnown RBP eCLIP17.69■□□□□ 0.42
CHRNA7-217ENST00000636603 CBX8Q9HC52 389 aa17.69■□□□□ 0.42
CHRNA7-217ENST00000636603 VAT1LQ9HCJ6 419 aa17.69■□□□□ 0.42
CHRNA7-217ENST00000636603 SPTLC3Q9NUV7 552 aa17.69■□□□□ 0.42
CHRNA7-217ENST00000636603 KIF3AQ9Y496 699 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms