RNA–Protein interactions for RNA: ENST00000627864.1

MECP2-216, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 3

Gene MECP2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-216ENST00000627864 RASGRP2Q7LDG7 609 aa22.04■■□□□ 1.12
MECP2-216ENST00000627864 CATIPQ7Z7H3 387 aa22.04■■□□□ 1.12
MECP2-216ENST00000627864 DCAF4Q8WV16 495 aa22.04■■□□□ 1.12
MECP2-216ENST00000627864 GMCL1Q96IK5 515 aa22.04■■□□□ 1.12
MECP2-216ENST00000627864 MYH6P13533 1939 aa22.04■■□□□ 1.12
MECP2-216ENST00000627864 COL11A1P12107 1806 aaPredicted RBP22.03■■□□□ 1.12
MECP2-216ENST00000627864 HOXA7P31268 230 aaPredicted RBP22.03■■□□□ 1.12
MECP2-216ENST00000627864 CATSPERGQ6ZRH7 1159 aa22.03■■□□□ 1.12
MECP2-216ENST00000627864 ZNF654Q8IZM8 581 aa22.03■■□□□ 1.12
MECP2-216ENST00000627864 BRF1Q92994 677 aa22.03■■□□□ 1.12
MECP2-216ENST00000627864 SLC45A1Q9Y2W3 748 aa22.03■■□□□ 1.12
MECP2-216ENST00000627864 ALDH1A1P00352 501 aa22.02■■□□□ 1.12
MECP2-216ENST00000627864 PDHBP11177 359 aa22.02■■□□□ 1.12
MECP2-216ENST00000627864 IRX3P78415 501 aaPredicted RBP22.02■■□□□ 1.12
MECP2-216ENST00000627864 MAP2K1Q02750 393 aaPredicted RBP22.02■■□□□ 1.12
MECP2-216ENST00000627864 APOBRQ0VD83 1088 aa22.02■■□□□ 1.12
MECP2-216ENST00000627864 TAF1CQ15572 869 aaPredicted RBP22.02■■□□□ 1.12
MECP2-216ENST00000627864 SAMD1Q6SPF0 538 aaPredicted RBP22.02■■□□□ 1.12
MECP2-216ENST00000627864 SYNE3Q6ZMZ3 975 aa22.02■■□□□ 1.12
MECP2-216ENST00000627864 KCTD1Q719H9 257 aa22.02■■□□□ 1.12
MECP2-216ENST00000627864 SGMS1Q86VZ5 419 aa22.02■■□□□ 1.12
MECP2-216ENST00000627864 NUP133Q8WUM0 1156 aa22.02■■□□□ 1.12
MECP2-216ENST00000627864 MYL10Q9BUA6 226 aa22.02■■□□□ 1.12
MECP2-216ENST00000627864 ASCC2Q9H1I8 757 aaPredicted RBP22.02■■□□□ 1.12
MECP2-216ENST00000627864 ZCCHC17Q9NP64 241 aaKnown RBP22.02■■□□□ 1.12
MECP2-216ENST00000627864 GPCPD1Q9NPB8 672 aa22.02■■□□□ 1.12
MECP2-216ENST00000627864 BRPF3Q9ULD4 1205 aa22.02■■□□□ 1.12
MECP2-216ENST00000627864 NAP1L2Q9ULW6 460 aaPredicted RBP22.02■■□□□ 1.12
MECP2-216ENST00000627864 SLC12A7Q9Y666 1083 aa22.02■■□□□ 1.12
MECP2-216ENST00000627864 BAZ2BQ9UIF8 2168 aaKnown RBP22.02■■□□□ 1.12
MECP2-216ENST00000627864 FRMPD2Q68DX3 1309 aaPredicted RBP22.02■■□□□ 1.12
MECP2-216ENST00000627864 CYP2C8P10632 490 aa22.01■■□□□ 1.11
MECP2-216ENST00000627864 TOB2Q14106 344 aaPredicted RBP22.01■■□□□ 1.11
MECP2-216ENST00000627864 RAB11FIP4Q86YS3 637 aa22.01■■□□□ 1.11
MECP2-216ENST00000627864 FBXL16Q8N461 479 aa22.01■■□□□ 1.11
MECP2-216ENST00000627864 AGXT2Q9BYV1 514 aa22.01■■□□□ 1.11
MECP2-216ENST00000627864 RNF186Q9NXI6 227 aa22.01■■□□□ 1.11
MECP2-216ENST00000627864 PNMA3Q9UL41 463 aa22.01■■□□□ 1.11
MECP2-216ENST00000627864 KLF18A0A0U1RQI7 1052 aa22■■□□□ 1.11
MECP2-216ENST00000627864 TMEM232C9JQI7 657 aa22■■□□□ 1.11
MECP2-216ENST00000627864 TRPA1O75762 1119 aa22■■□□□ 1.11
MECP2-216ENST00000627864 FLOT1O75955 427 aa22■■□□□ 1.11
MECP2-216ENST00000627864 DDAH1O94760 285 aa22■■□□□ 1.11
MECP2-216ENST00000627864 GOLGA8HP0CJ92 632 aa22■■□□□ 1.11
MECP2-216ENST00000627864 SNHG28P0DPA3 235 aa22■■□□□ 1.11
MECP2-216ENST00000627864 ZNF543Q08ER8 600 aa22■■□□□ 1.11
MECP2-216ENST00000627864 IKQ13123 557 aaPredicted RBP22■■□□□ 1.11
MECP2-216ENST00000627864 P2RX7Q99572 595 aaKnown RBP22■■□□□ 1.11
MECP2-216ENST00000627864 LARP6Q9BRS8 491 aaKnown RBP22■■□□□ 1.11
MECP2-216ENST00000627864 FBXO28Q9NVF7 368 aa22■■□□□ 1.11
MECP2-216ENST00000627864 PARP1P09874 1014 aaKnown RBP21.99■■□□□ 1.11
MECP2-216ENST00000627864 TROAPQ12815 778 aa21.99■■□□□ 1.11
MECP2-216ENST00000627864 COG2Q14746 738 aa21.99■■□□□ 1.11
MECP2-216ENST00000627864 RABEP1Q15276 862 aa21.99■■□□□ 1.11
MECP2-216ENST00000627864 TTBK2Q6IQ55 1244 aa21.99■■□□□ 1.11
MECP2-216ENST00000627864 APOA5Q6Q788 366 aa21.99■■□□□ 1.11
MECP2-216ENST00000627864 PARK7Q99497 189 aaKnown RBP21.99■■□□□ 1.11
MECP2-216ENST00000627864 BEGAINQ9BUH8 593 aa21.99■■□□□ 1.11
MECP2-216ENST00000627864 ALDH8A1Q9H2A2 487 aaPredicted RBP21.99■■□□□ 1.11
MECP2-216ENST00000627864 ZFYVE28Q9HCC9 887 aa21.99■■□□□ 1.11
MECP2-216ENST00000627864 FEM1BQ9UK73 627 aa21.99■■□□□ 1.11
MECP2-216ENST00000627864 CA12O43570 354 aa21.98■■□□□ 1.11
MECP2-216ENST00000627864 CALM1P0DP23 149 aa21.98■■□□□ 1.11
MECP2-216ENST00000627864 CALM2P0DP24 149 aa21.98■■□□□ 1.11
MECP2-216ENST00000627864 CALM3P0DP25 149 aa21.98■■□□□ 1.11
MECP2-216ENST00000627864 RXRAP19793 462 aa21.98■■□□□ 1.11
MECP2-216ENST00000627864 AK2P54819 239 aa21.98■■□□□ 1.11
MECP2-216ENST00000627864 GRM4Q14833 912 aa21.98■■□□□ 1.11
MECP2-216ENST00000627864 ASPRV1Q53RT3 343 aa21.98■■□□□ 1.11
MECP2-216ENST00000627864 CCDC144CPQ8IYA2 1237 aa21.98■■□□□ 1.11
MECP2-216ENST00000627864 SMCR8Q8TEV9 937 aaPredicted RBP21.98■■□□□ 1.11
MECP2-216ENST00000627864 CHURC1Q8WUH1 139 aa21.98■■□□□ 1.11
MECP2-216ENST00000627864 HOXC10Q9NYD6 342 aa21.98■■□□□ 1.11
MECP2-216ENST00000627864 ZBTB43O43298 467 aa21.97■■□□□ 1.11
MECP2-216ENST00000627864 TBC1D8O95759 1140 aa21.97■■□□□ 1.11
MECP2-216ENST00000627864 DSG3P32926 999 aa21.97■■□□□ 1.11
MECP2-216ENST00000627864 SLC16A2P36021 539 aa21.97■■□□□ 1.11
MECP2-216ENST00000627864 STAT2P52630 851 aa21.97■■□□□ 1.11
MECP2-216ENST00000627864 HERVK_113P62684 666 aa21.97■■□□□ 1.11
MECP2-216ENST00000627864 CRHR2Q13324 411 aa21.97■■□□□ 1.11
MECP2-216ENST00000627864 GPATCH4Q5T3I0 446 aaKnown RBP21.97■■□□□ 1.11
MECP2-216ENST00000627864 FAM160B2Q86V87 743 aa21.97■■□□□ 1.11
MECP2-216ENST00000627864 MICU3Q86XE3 530 aa21.97■■□□□ 1.11
MECP2-216ENST00000627864 STAG2Q8N3U4 1231 aa21.97■■□□□ 1.11
MECP2-216ENST00000627864 JMYQ8N9B5 988 aa21.97■■□□□ 1.11
MECP2-216ENST00000627864 CTCFLQ8NI51 663 aaPredicted RBP21.97■■□□□ 1.11
MECP2-216ENST00000627864 SLF1Q9BQI6 1058 aa21.97■■□□□ 1.11
MECP2-216ENST00000627864 ANKRD1Q15327 319 aa21.96■■□□□ 1.11
MECP2-216ENST00000627864 NOL8Q76FK4 1167 aaKnown RBP21.96■■□□□ 1.11
MECP2-216ENST00000627864 PRPF38AQ8NAV1 312 aaKnown RBP21.96■■□□□ 1.11
MECP2-216ENST00000627864 KIFC2Q96AC6 838 aa21.96■■□□□ 1.11
MECP2-216ENST00000627864 MAP3K14Q99558 947 aa21.96■■□□□ 1.11
MECP2-216ENST00000627864 UBA5Q9GZZ9 404 aa21.96■■□□□ 1.11
MECP2-216ENST00000627864 WBP1LQ9NX94 342 aa21.96■■□□□ 1.11
MECP2-216ENST00000627864 MAD2L2Q9UI95 211 aa21.96■■□□□ 1.11
MECP2-216ENST00000627864 PPP1R9AQ9ULJ8 1098 aa21.96■■□□□ 1.11
MECP2-216ENST00000627864 PALM3A6NDB9 673 aaPredicted RBP21.95■■□□□ 1.1
MECP2-216ENST00000627864 SPDYE16A6NNV3 312 aaPredicted RBP21.95■■□□□ 1.1
MECP2-216ENST00000627864 GOLGA8BA8MQT2 603 aa21.95■■□□□ 1.1
MECP2-216ENST00000627864 KLRF2D3W0D1 207 aa21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms