RNA–Protein interactions for RNA: ENST00000626620.3

KCNMA1-225, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KCNMA1, Length 3,660 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-225ENST00000626620 USP17L10C9JJH3 530 aa12.39□□□□□ -0.43
KCNMA1-225ENST00000626620 CDC27P30260 824 aa12.39□□□□□ -0.43
KCNMA1-225ENST00000626620 GRM4Q14833 912 aa12.39□□□□□ -0.43
KCNMA1-225ENST00000626620 TMTC2Q8N394 836 aa12.39□□□□□ -0.43
KCNMA1-225ENST00000626620 SLC10A4Q96EP9 437 aa12.39□□□□□ -0.43
KCNMA1-225ENST00000626620 SMCHD1A6NHR9 2005 aa12.39□□□□□ -0.43
KCNMA1-225ENST00000626620 TTLL12Q14166 644 aaPredicted RBP12.39□□□□□ -0.43
KCNMA1-225ENST00000626620 BTNL9Q6UXG8 535 aa12.39□□□□□ -0.43
KCNMA1-225ENST00000626620 OTUD5Q96G74 571 aa12.39□□□□□ -0.43
KCNMA1-225ENST00000626620 C19orf81C9J6K1 198 aa12.38□□□□□ -0.43
KCNMA1-225ENST00000626620 PLA2G6O60733 806 aa12.38□□□□□ -0.43
KCNMA1-225ENST00000626620 PFKFB2O60825 505 aa12.38□□□□□ -0.43
KCNMA1-225ENST00000626620 DDAH1O94760 285 aa12.38□□□□□ -0.43
KCNMA1-225ENST00000626620 CTDNEP1O95476 244 aa12.38□□□□□ -0.43
KCNMA1-225ENST00000626620 PPP4R3BQ5MIZ7 849 aa12.38□□□□□ -0.43
KCNMA1-225ENST00000626620 TREML2Q5T2D2 321 aa12.38□□□□□ -0.43
KCNMA1-225ENST00000626620 NBPF11Q86T75 865 aa12.38□□□□□ -0.43
KCNMA1-225ENST00000626620 ADAMTS5Q9UNA0 930 aa12.38□□□□□ -0.43
KCNMA1-225ENST00000626620 STX8Q9UNK0 236 aa12.38□□□□□ -0.43
KCNMA1-225ENST00000626620 STAG2Q8N3U4 1231 aa12.38□□□□□ -0.43
KCNMA1-225ENST00000626620 BRI3BPQ8WY22 251 aa12.38□□□□□ -0.43
KCNMA1-225ENST00000626620 MTMR8Q96EF0 704 aa12.38□□□□□ -0.43
KCNMA1-225ENST00000626620 MYL10Q9BUA6 226 aa12.38□□□□□ -0.43
KCNMA1-225ENST00000626620 AS3MTQ9HBK9 375 aa12.38□□□□□ -0.43
KCNMA1-225ENST00000626620 ARHGEF10LQ9HCE6 1279 aa12.38□□□□□ -0.43
KCNMA1-225ENST00000626620 VCAM1P19320 739 aa12.38□□□□□ -0.43
KCNMA1-225ENST00000626620 ZNF543Q08ER8 600 aa12.38□□□□□ -0.43
KCNMA1-225ENST00000626620 NFKBIBQ15653 356 aa12.38□□□□□ -0.43
KCNMA1-225ENST00000626620 MCOLN1Q9GZU1 580 aa12.38□□□□□ -0.43
KCNMA1-225ENST00000626620 TRIM75PA6NK02 468 aa12.37□□□□□ -0.43
KCNMA1-225ENST00000626620 CYTH3O43739 400 aa12.37□□□□□ -0.43
KCNMA1-225ENST00000626620 HOXA7P31268 230 aaPredicted RBP12.37□□□□□ -0.43
KCNMA1-225ENST00000626620 SCRN1Q12765 414 aa12.37□□□□□ -0.43
KCNMA1-225ENST00000626620 USP17L2Q6R6M4 530 aa12.37□□□□□ -0.43
KCNMA1-225ENST00000626620 PROCA1Q8NCQ7 364 aaPredicted RBP12.37□□□□□ -0.43
KCNMA1-225ENST00000626620 DCAF4Q8WV16 495 aa12.37□□□□□ -0.43
KCNMA1-225ENST00000626620 TSKSQ9UJT2 592 aa12.37□□□□□ -0.43
KCNMA1-225ENST00000626620 ADGRA2Q96PE1 1338 aa12.37□□□□□ -0.43
KCNMA1-225ENST00000626620 KLF18A0A0U1RQI7 1052 aa12.37□□□□□ -0.43
KCNMA1-225ENST00000626620 CUL4AQ13619 759 aa12.37□□□□□ -0.43
KCNMA1-225ENST00000626620 LPAR1Q92633 364 aa12.37□□□□□ -0.43
KCNMA1-225ENST00000626620 LCTP09848 1927 aa12.37□□□□□ -0.43
KCNMA1-225ENST00000626620 HMGCS2P54868 508 aa12.36□□□□□ -0.43
KCNMA1-225ENST00000626620 NUP88Q99567 741 aaPredicted RBP12.36□□□□□ -0.43
KCNMA1-225ENST00000626620 ZNF157P51786 506 aaPredicted RBP12.36□□□□□ -0.43
KCNMA1-225ENST00000626620 SART3Q15020 963 aaKnown RBP12.36□□□□□ -0.43
KCNMA1-225ENST00000626620 ANKRD1Q15327 319 aa12.36□□□□□ -0.43
KCNMA1-225ENST00000626620 SLFN13Q68D06 897 aa12.36□□□□□ -0.43
KCNMA1-225ENST00000626620 FANCBQ8NB91 859 aa12.36□□□□□ -0.43
KCNMA1-225ENST00000626620 REPS2Q8NFH8 660 aa12.36□□□□□ -0.43
KCNMA1-225ENST00000626620 KAT14Q9H8E8 782 aa12.36□□□□□ -0.43
KCNMA1-225ENST00000626620 LIMCH1Q9UPQ0 1083 aa12.36□□□□□ -0.43
KCNMA1-225ENST00000626620 CATSPERGQ6ZRH7 1159 aa12.36□□□□□ -0.43
KCNMA1-225ENST00000626620 TTBK2Q6IQ55 1244 aa12.35□□□□□ -0.43
KCNMA1-225ENST00000626620 SRBD1Q8N5C6 995 aaKnown RBP12.35□□□□□ -0.43
KCNMA1-225ENST00000626620 GTF3C6Q969F1 213 aa12.35□□□□□ -0.43
KCNMA1-225ENST00000626620 SHISA4Q96DD7 197 aa12.35□□□□□ -0.43
KCNMA1-225ENST00000626620 RIOX1Q9H6W3 641 aa12.35□□□□□ -0.43
KCNMA1-225ENST00000626620 SLC45A1Q9Y2W3 748 aa12.35□□□□□ -0.43
KCNMA1-225ENST00000626620 WDR46O15213 610 aaKnown RBP12.35□□□□□ -0.43
KCNMA1-225ENST00000626620 RXRAP19793 462 aa12.35□□□□□ -0.43
KCNMA1-225ENST00000626620 USP14P54578 494 aa12.35□□□□□ -0.43
KCNMA1-225ENST00000626620 TMX3Q96JJ7 454 aa12.35□□□□□ -0.43
KCNMA1-225ENST00000626620 GOPCQ9HD26 462 aa12.35□□□□□ -0.43
KCNMA1-225ENST00000626620 PLXNB2O15031 1838 aa12.35□□□□□ -0.43
KCNMA1-225ENST00000626620 IGF2BP3O00425 579 aaKnown RBP eCLIP12.35□□□□□ -0.43
KCNMA1-225ENST00000626620 PLEKHA8P1O95397 391 aa12.35□□□□□ -0.43
KCNMA1-225ENST00000626620 SMARCA1P28370 1054 aa12.35□□□□□ -0.43
KCNMA1-225ENST00000626620 GTF2A2P52657 109 aa12.35□□□□□ -0.43
KCNMA1-225ENST00000626620 SNAPC2Q13487 334 aa12.35□□□□□ -0.43
KCNMA1-225ENST00000626620 LBX2Q6XYB7 198 aa12.35□□□□□ -0.43
KCNMA1-225ENST00000626620 SPICE1Q8N0Z3 855 aa12.35□□□□□ -0.43
KCNMA1-225ENST00000626620 AGTPBP1Q9UPW5 1226 aa12.35□□□□□ -0.43
KCNMA1-225ENST00000626620 ADD1P35611 737 aaKnown RBP12.34□□□□□ -0.43
KCNMA1-225ENST00000626620 FAM83BQ5T0W9 1011 aa12.34□□□□□ -0.43
KCNMA1-225ENST00000626620 TMTC3Q6ZXV5 915 aa12.34□□□□□ -0.43
KCNMA1-225ENST00000626620 RAB11FIP4Q86YS3 637 aa12.34□□□□□ -0.43
KCNMA1-225ENST00000626620 SH2D4AQ9H788 454 aa12.34□□□□□ -0.43
KCNMA1-225ENST00000626620 SLC12A7Q9Y666 1083 aa12.34□□□□□ -0.43
KCNMA1-225ENST00000626620 CNTNAP5Q8WYK1 1306 aa12.34□□□□□ -0.43
KCNMA1-225ENST00000626620 ERICH2A1L162 156 aa12.34□□□□□ -0.43
KCNMA1-225ENST00000626620 BTBD19C9JJ37 291 aa12.34□□□□□ -0.43
KCNMA1-225ENST00000626620 ZBTB43O43298 467 aa12.34□□□□□ -0.43
KCNMA1-225ENST00000626620 ANKRD23Q86SG2 305 aa12.34□□□□□ -0.43
KCNMA1-225ENST00000626620 FAM43AQ8N2R8 423 aa12.34□□□□□ -0.43
KCNMA1-225ENST00000626620 NCOA5Q9HCD5 579 aaKnown RBP12.34□□□□□ -0.43
KCNMA1-225ENST00000626620 CCDC69A6NI79 296 aa12.34□□□□□ -0.43
KCNMA1-225ENST00000626620 CNMDO75829 334 aa12.34□□□□□ -0.43
KCNMA1-225ENST00000626620 ZYXQ15942 572 aaKnown RBP12.34□□□□□ -0.43
KCNMA1-225ENST00000626620 KCTD1Q719H9 257 aa12.34□□□□□ -0.43
KCNMA1-225ENST00000626620 CATIPQ7Z7H3 387 aa12.34□□□□□ -0.43
KCNMA1-225ENST00000626620 SMARCC2Q8TAQ2 1214 aa12.34□□□□□ -0.43
KCNMA1-225ENST00000626620 ZNF536O15090 1300 aa12.34□□□□□ -0.43
KCNMA1-225ENST00000626620 GOLGA8HP0CJ92 632 aa12.33□□□□□ -0.44
KCNMA1-225ENST00000626620 CALM1P0DP23 149 aa12.33□□□□□ -0.44
KCNMA1-225ENST00000626620 CALM2P0DP24 149 aa12.33□□□□□ -0.44
KCNMA1-225ENST00000626620 CALM3P0DP25 149 aa12.33□□□□□ -0.44
KCNMA1-225ENST00000626620 BMP3P12645 472 aa12.33□□□□□ -0.44
KCNMA1-225ENST00000626620 ASPRV1Q53RT3 343 aa12.33□□□□□ -0.44
KCNMA1-225ENST00000626620 CPVLQ9H3G5 476 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms