RNA–Protein interactions for RNA: ENST00000625617.2

TUBB3-215, Transcript of tubulin beta 3 class III, humanhuman

TSL 4 BASIC

Gene TUBB3, Length 570 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-215ENST00000625617 ATP11BQ9Y2G3 1177 aa17.39■□□□□ 0.37
TUBB3-215ENST00000625617 STXBP5LQ9Y2K9 1186 aa17.39■□□□□ 0.37
TUBB3-215ENST00000625617 RAD21O60216 631 aa17.38■□□□□ 0.37
TUBB3-215ENST00000625617 MMP19Q99542 508 aa17.38■□□□□ 0.37
TUBB3-215ENST00000625617 FBXO28Q9NVF7 368 aa17.38■□□□□ 0.37
TUBB3-215ENST00000625617 MTMR10Q9NXD2 777 aa17.38■□□□□ 0.37
TUBB3-215ENST00000625617 RCAN3Q9UKA8 241 aa17.38■□□□□ 0.37
TUBB3-215ENST00000625617 FAM47AQ5JRC9 791 aa17.37■□□□□ 0.37
TUBB3-215ENST00000625617 PRAMEF19Q5SWL8 479 aa17.37■□□□□ 0.37
TUBB3-215ENST00000625617 CTR9Q6PD62 1173 aa17.37■□□□□ 0.37
TUBB3-215ENST00000625617 RIOX2Q8IUF8 465 aa17.37■□□□□ 0.37
TUBB3-215ENST00000625617 PUS7LQ9H0K6 701 aaKnown RBP17.37■□□□□ 0.37
TUBB3-215ENST00000625617 PPP1R9AQ9ULJ8 1098 aa17.37■□□□□ 0.37
TUBB3-215ENST00000625617 DLL1O00548 723 aa17.36■□□□□ 0.37
TUBB3-215ENST00000625617 COPB2P35606 906 aa17.36■□□□□ 0.37
TUBB3-215ENST00000625617 KCTD2Q14681 263 aa17.36■□□□□ 0.37
TUBB3-215ENST00000625617 LRRC41Q15345 812 aa17.36■□□□□ 0.37
TUBB3-215ENST00000625617 FAM83BQ5T0W9 1011 aa17.36■□□□□ 0.37
TUBB3-215ENST00000625617 PRDM5Q9NQX1 630 aaPredicted RBP17.36■□□□□ 0.37
TUBB3-215ENST00000625617 NRBP1Q9UHY1 535 aa17.36■□□□□ 0.37
TUBB3-215ENST00000625617 ADAMTS5Q9UNA0 930 aa17.36■□□□□ 0.37
TUBB3-215ENST00000625617 RLFQ13129 1914 aa17.36■□□□□ 0.37
TUBB3-215ENST00000625617 VWA5AO00534 786 aa17.35■□□□□ 0.37
TUBB3-215ENST00000625617 SMARCA5O60264 1052 aaPredicted RBP17.35■□□□□ 0.37
TUBB3-215ENST00000625617 PGK2P07205 417 aa17.35■□□□□ 0.37
TUBB3-215ENST00000625617 RARBP10826 455 aa17.35■□□□□ 0.37
TUBB3-215ENST00000625617 SNX17Q15036 470 aa17.35■□□□□ 0.37
TUBB3-215ENST00000625617 TRIM60Q495X7 471 aa17.35■□□□□ 0.37
TUBB3-215ENST00000625617 SLC39A5Q6ZMH5 540 aa17.35■□□□□ 0.37
TUBB3-215ENST00000625617 GPATCH3Q96I76 525 aa17.35■□□□□ 0.37
TUBB3-215ENST00000625617 ECHDC1Q9NTX5 307 aa17.35■□□□□ 0.37
TUBB3-215ENST00000625617 ZNF214Q9UL59 606 aaPredicted RBP17.35■□□□□ 0.37
TUBB3-215ENST00000625617 ROBO3Q96MS0 1386 aa17.35■□□□□ 0.37
TUBB3-215ENST00000625617 STAT3P40763 770 aa17.34■□□□□ 0.37
TUBB3-215ENST00000625617 ADCYAP1R1P41586 468 aa17.34■□□□□ 0.37
TUBB3-215ENST00000625617 XPNPEP3Q9NQH7 507 aa17.34■□□□□ 0.37
TUBB3-215ENST00000625617 RASA1P20936 1047 aa17.33■□□□□ 0.36
TUBB3-215ENST00000625617 SBK1Q52WX2 424 aa17.33■□□□□ 0.36
TUBB3-215ENST00000625617 C20orf194Q5TEA3 1177 aa17.33■□□□□ 0.36
TUBB3-215ENST00000625617 FAM109BQ6ICB4 259 aaPredicted RBP17.33■□□□□ 0.36
TUBB3-215ENST00000625617 GIMAP6Q6P9H5 292 aa17.33■□□□□ 0.36
TUBB3-215ENST00000625617 KBTBD3Q8NAB2 608 aa17.33■□□□□ 0.36
TUBB3-215ENST00000625617 REPS2Q8NFH8 660 aa17.33■□□□□ 0.36
TUBB3-215ENST00000625617 APPBP2Q92624 585 aa17.33■□□□□ 0.36
TUBB3-215ENST00000625617 FERMT2Q96AC1 680 aa17.33■□□□□ 0.36
TUBB3-215ENST00000625617 STRBPQ96SI9 672 aaKnown RBP17.33■□□□□ 0.36
TUBB3-215ENST00000625617 SLF1Q9BQI6 1058 aa17.33■□□□□ 0.36
TUBB3-215ENST00000625617 TINF2Q9BSI4 451 aa17.33■□□□□ 0.36
TUBB3-215ENST00000625617 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.33■□□□□ 0.36
TUBB3-215ENST00000625617 MKNK2Q9HBH9 465 aa17.33■□□□□ 0.36
TUBB3-215ENST00000625617 PDLIM7Q9NR12 457 aa17.33■□□□□ 0.36
TUBB3-215ENST00000625617 DIS3Q9Y2L1 958 aaKnown RBP17.33■□□□□ 0.36
TUBB3-215ENST00000625617 BAZ2AQ9UIF9 1905 aaKnown RBP17.33■□□□□ 0.36
TUBB3-215ENST00000625617 COL6A3P12111 3177 aa17.32■□□□□ 0.36
TUBB3-215ENST00000625617 MYH8P13535 1937 aa17.32■□□□□ 0.36
TUBB3-215ENST00000625617 ZNF792Q3KQV3 632 aa17.32■□□□□ 0.36
TUBB3-215ENST00000625617 RNF180Q86T96 592 aa17.32■□□□□ 0.36
TUBB3-215ENST00000625617 STK11IPQ8N1F8 1099 aa17.32■□□□□ 0.36
TUBB3-215ENST00000625617 NUP88Q99567 741 aaPredicted RBP17.32■□□□□ 0.36
TUBB3-215ENST00000625617 TEX13BQ9BXU2 312 aa17.32■□□□□ 0.36
TUBB3-215ENST00000625617 PHF24Q9UPV7 400 aa17.32■□□□□ 0.36
TUBB3-215ENST00000625617 CNPY2Q9Y2B0 182 aa17.32■□□□□ 0.36
TUBB3-215ENST00000625617 GSG1L2A8MUP6 293 aa17.31■□□□□ 0.36
TUBB3-215ENST00000625617 MINDY4BA8MYZ0 360 aa17.31■□□□□ 0.36
TUBB3-215ENST00000625617 NDUFB10O96000 172 aa17.31■□□□□ 0.36
TUBB3-215ENST00000625617 PGK1P00558 417 aa17.31■□□□□ 0.36
TUBB3-215ENST00000625617 AKR1A1P14550 325 aa17.31■□□□□ 0.36
TUBB3-215ENST00000625617 ZNF697Q5TEC3 545 aa17.31■□□□□ 0.36
TUBB3-215ENST00000625617 C1orf53Q5VUE5 145 aa17.31■□□□□ 0.36
TUBB3-215ENST00000625617 SNRNP48Q6IEG0 339 aaKnown RBP17.31■□□□□ 0.36
TUBB3-215ENST00000625617 OSBP2Q969R2 916 aa17.31■□□□□ 0.36
TUBB3-215ENST00000625617 NYAP2Q9P242 653 aa17.31■□□□□ 0.36
TUBB3-215ENST00000625617 POTEB2H3BUK9 544 aa17.3■□□□□ 0.36
TUBB3-215ENST00000625617 GPAA1O43292 621 aa17.3■□□□□ 0.36
TUBB3-215ENST00000625617 ZFYP08048 801 aaPredicted RBP17.3■□□□□ 0.36
TUBB3-215ENST00000625617 TAL1P17542 331 aaPredicted RBP17.3■□□□□ 0.36
TUBB3-215ENST00000625617 TDO2P48775 406 aa17.3■□□□□ 0.36
TUBB3-215ENST00000625617 TSHZ3Q63HK5 1081 aa17.3■□□□□ 0.36
TUBB3-215ENST00000625617 BADQ92934 168 aa17.3■□□□□ 0.36
TUBB3-215ENST00000625617 LENG1Q96BZ8 264 aaPredicted RBP17.3■□□□□ 0.36
TUBB3-215ENST00000625617 ZNF287Q9HBT7 754 aa17.3■□□□□ 0.36
TUBB3-215ENST00000625617 EPB41L4AQ9HCS5 686 aaPredicted RBP17.3■□□□□ 0.36
TUBB3-215ENST00000625617 LTBP2Q14767 1821 aa17.3■□□□□ 0.36
TUBB3-215ENST00000625617 PARP14Q460N5 1801 aa17.29■□□□□ 0.36
TUBB3-215ENST00000625617 F5H6K3 240 aa17.29■□□□□ 0.36
TUBB3-215ENST00000625617 RNF113AO15541 343 aaKnown RBP17.29■□□□□ 0.36
TUBB3-215ENST00000625617 ZNF865P0CJ78 1059 aaPredicted RBP17.29■□□□□ 0.36
TUBB3-215ENST00000625617 GNAT2P19087 354 aa17.29■□□□□ 0.36
TUBB3-215ENST00000625617 TLE2Q04725 743 aa17.29■□□□□ 0.36
TUBB3-215ENST00000625617 KLRC3Q07444 240 aa17.29■□□□□ 0.36
TUBB3-215ENST00000625617 SHHQ15465 462 aa17.29■□□□□ 0.36
TUBB3-215ENST00000625617 C9orf50Q5SZB4 431 aa17.29■□□□□ 0.36
TUBB3-215ENST00000625617 MSL3Q8N5Y2 521 aaKnown RBP17.29■□□□□ 0.36
TUBB3-215ENST00000625617 FAM161BQ96MY7 647 aa17.29■□□□□ 0.36
TUBB3-215ENST00000625617 GUCD1Q96NT3 240 aa17.29■□□□□ 0.36
TUBB3-215ENST00000625617 CTDP1Q9Y5B0 961 aaPredicted RBP17.29■□□□□ 0.36
TUBB3-215ENST00000625617 SYNGAP1Q96PV0 1343 aa17.28■□□□□ 0.36
TUBB3-215ENST00000625617 MYH7P12883 1935 aa17.28■□□□□ 0.36
TUBB3-215ENST00000625617 A0A1W2PQ45 241 aaPredicted RBP17.28■□□□□ 0.36
TUBB3-215ENST00000625617 A0A1W2PQY0 241 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms