RNA–Protein interactions for RNA: ENST00000624403.1

ATRX-216, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 3

Gene ATRX, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-216ENST00000624403 TFIP11Q9UBB9 837 aaKnown RBP11.98□□□□□ -0.49
ATRX-216ENST00000624403 IGKV6D-41A0A0C4DH26 115 aa11.97□□□□□ -0.49
ATRX-216ENST00000624403 DEXIO95424 95 aa11.97□□□□□ -0.49
ATRX-216ENST00000624403 MBD3O95983 291 aa11.97□□□□□ -0.49
ATRX-216ENST00000624403 NOVP48745 357 aa11.97□□□□□ -0.49
ATRX-216ENST00000624403 PRELPP51888 382 aa11.97□□□□□ -0.49
ATRX-216ENST00000624403 KIF23Q02241 960 aaPredicted RBP11.97□□□□□ -0.49
ATRX-216ENST00000624403 TRIM29Q14134 588 aa11.97□□□□□ -0.49
ATRX-216ENST00000624403 GRM4Q14833 912 aa11.97□□□□□ -0.49
ATRX-216ENST00000624403 TNIP1Q15025 636 aa11.97□□□□□ -0.49
ATRX-216ENST00000624403 OGFOD1Q8N543 542 aa11.97□□□□□ -0.49
ATRX-216ENST00000624403 SRBD1Q8N5C6 995 aaKnown RBP11.97□□□□□ -0.49
ATRX-216ENST00000624403 CEP95Q96GE4 821 aa11.97□□□□□ -0.49
ATRX-216ENST00000624403 MAP3K14Q99558 947 aa11.97□□□□□ -0.49
ATRX-216ENST00000624403 ZBED2Q9BTP6 218 aa11.97□□□□□ -0.49
ATRX-216ENST00000624403 RNF26Q9BY78 433 aaPredicted RBP11.97□□□□□ -0.49
ATRX-216ENST00000624403 ZNF70Q9UC06 446 aaPredicted RBP11.97□□□□□ -0.49
ATRX-216ENST00000624403 CNTNAP5Q8WYK1 1306 aa11.96□□□□□ -0.49
ATRX-216ENST00000624403 CLRN2A0PK11 232 aa11.96□□□□□ -0.49
ATRX-216ENST00000624403 KIF28PB7ZC32 967 aa11.96□□□□□ -0.49
ATRX-216ENST00000624403 PRPF3O43395 683 aaKnown RBP11.96□□□□□ -0.49
ATRX-216ENST00000624403 SLURP2P0DP57 97 aa11.96□□□□□ -0.49
ATRX-216ENST00000624403 TOP1P11387 765 aaKnown RBP11.96□□□□□ -0.49
ATRX-216ENST00000624403 COL9A1P20849 921 aa11.96□□□□□ -0.49
ATRX-216ENST00000624403 KIF5BP33176 963 aa11.96□□□□□ -0.49
ATRX-216ENST00000624403 UBE2HP62256 183 aa11.96□□□□□ -0.49
ATRX-216ENST00000624403 AKAP17AQ02040 695 aaKnown RBP11.96□□□□□ -0.49
ATRX-216ENST00000624403 ZSCAN29Q8IWY8 852 aaPredicted RBP11.96□□□□□ -0.49
ATRX-216ENST00000624403 MTMR14Q8NCE2 650 aa11.96□□□□□ -0.49
ATRX-216ENST00000624403 LEO1Q8WVC0 666 aaPredicted RBP11.96□□□□□ -0.49
ATRX-216ENST00000624403 ZNF396Q96N95 335 aaPredicted RBP11.96□□□□□ -0.49
ATRX-216ENST00000624403 SCAND2PQ9GZW5 306 aaPredicted RBP11.96□□□□□ -0.49
ATRX-216ENST00000624403 DNAJC18Q9H819 358 aa11.96□□□□□ -0.49
ATRX-216ENST00000624403 TMOD2Q9NZR1 351 aa11.96□□□□□ -0.49
ATRX-216ENST00000624403 RBM27Q9P2N5 1060 aaKnown RBP11.96□□□□□ -0.49
ATRX-216ENST00000624403 PI4KBQ9UBF8 816 aa11.96□□□□□ -0.49
ATRX-216ENST00000624403 STX8Q9UNK0 236 aa11.96□□□□□ -0.49
ATRX-216ENST00000624403 V9GY48 417 aaPredicted RBP11.96□□□□□ -0.49
ATRX-216ENST00000624403 COL2A1P02458 1487 aaPredicted RBP11.95□□□□□ -0.5
ATRX-216ENST00000624403 ATRNL1Q5VV63 1379 aa11.95□□□□□ -0.5
ATRX-216ENST00000624403 ELP1O95163 1332 aa11.95□□□□□ -0.5
ATRX-216ENST00000624403 hCG_1642624A0A1W2PR95 340 aa11.95□□□□□ -0.5
ATRX-216ENST00000624403 TCP10L2B9ZVM9 353 aa11.95□□□□□ -0.5
ATRX-216ENST00000624403 PKN1Q16512 942 aa11.95□□□□□ -0.5
ATRX-216ENST00000624403 ATL3Q6DD88 541 aa11.95□□□□□ -0.5
ATRX-216ENST00000624403 CAVIN1Q6NZI2 390 aaKnown RBP11.95□□□□□ -0.5
ATRX-216ENST00000624403 BRAPQ7Z569 592 aa11.95□□□□□ -0.5
ATRX-216ENST00000624403 FOXP4Q8IVH2 680 aaPredicted RBP11.95□□□□□ -0.5
ATRX-216ENST00000624403 ZBED3Q96IU2 234 aaPredicted RBP11.95□□□□□ -0.5
ATRX-216ENST00000624403 SPATA32Q96LK8 384 aa11.95□□□□□ -0.5
ATRX-216ENST00000624403 SLC4A5Q9BY07 1137 aa11.95□□□□□ -0.5
ATRX-216ENST00000624403 MTMR4Q9NYA4 1195 aa11.95□□□□□ -0.5
ATRX-216ENST00000624403 CFAP45Q9UL16 551 aa11.95□□□□□ -0.5
ATRX-216ENST00000624403 SIPA1L1O43166 1804 aa11.95□□□□□ -0.5
ATRX-216ENST00000624403 SHTN1A0MZ66 631 aa11.94□□□□□ -0.5
ATRX-216ENST00000624403 FAM196BA6NMK8 535 aa11.94□□□□□ -0.5
ATRX-216ENST00000624403 GNAQP50148 359 aa11.94□□□□□ -0.5
ATRX-216ENST00000624403 METTL16Q86W50 562 aaKnown RBP11.94□□□□□ -0.5
ATRX-216ENST00000624403 CLEC10AQ8IUN9 316 aa11.94□□□□□ -0.5
ATRX-216ENST00000624403 STAG2Q8N3U4 1231 aa11.94□□□□□ -0.5
ATRX-216ENST00000624403 SHISA4Q96DD7 197 aa11.94□□□□□ -0.5
ATRX-216ENST00000624403 CCDC17Q96LX7 622 aa11.94□□□□□ -0.5
ATRX-216ENST00000624403 USP28Q96RU2 1077 aa11.94□□□□□ -0.5
ATRX-216ENST00000624403 TRIM34Q9BYJ4 488 aa11.94□□□□□ -0.5
ATRX-216ENST00000624403 FTOQ9C0B1 505 aaKnown RBP eCLIP11.94□□□□□ -0.5
ATRX-216ENST00000624403 MAD2L2Q9UI95 211 aa11.94□□□□□ -0.5
ATRX-216ENST00000624403 KCNJ14Q9UNX9 436 aa11.94□□□□□ -0.5
ATRX-216ENST00000624403 MTMR7Q9Y216 660 aa11.94□□□□□ -0.5
ATRX-216ENST00000624403 CNTNAP1P78357 1384 aa11.93□□□□□ -0.5
ATRX-216ENST00000624403 PALM3A6NDB9 673 aaPredicted RBP11.93□□□□□ -0.5
ATRX-216ENST00000624403 FZD9O00144 591 aa11.93□□□□□ -0.5
ATRX-216ENST00000624403 MPHOSPH10O00566 681 aaKnown RBP11.93□□□□□ -0.5
ATRX-216ENST00000624403 MMP1P03956 469 aa11.93□□□□□ -0.5
ATRX-216ENST00000624403 RPS12P25398 132 aaKnown RBP11.93□□□□□ -0.5
ATRX-216ENST00000624403 U2AF2P26368 475 aaKnown RBP eCLIP11.93□□□□□ -0.53e-6■□□□□ 8.9
ATRX-216ENST00000624403 DEKP35659 375 aaKnown RBP11.93□□□□□ -0.5
ATRX-216ENST00000624403 GMPSP49915 693 aaPredicted RBP11.93□□□□□ -0.5
ATRX-216ENST00000624403 EIF6P56537 245 aaKnown RBP11.93□□□□□ -0.5
ATRX-216ENST00000624403 ZNF280AP59817 542 aaPredicted RBP11.93□□□□□ -0.5
ATRX-216ENST00000624403 CEBPZQ03701 1054 aaKnown RBP11.93□□□□□ -0.5
ATRX-216ENST00000624403 SLC35G1Q2M3R5 365 aa11.93□□□□□ -0.5
ATRX-216ENST00000624403 TPRNQ4KMQ1 711 aa11.93□□□□□ -0.5
ATRX-216ENST00000624403 MYSM1Q5VVJ2 828 aa11.93□□□□□ -0.5
ATRX-216ENST00000624403 TATDN1Q6P1N9 297 aa11.93□□□□□ -0.5
ATRX-216ENST00000624403 RASGRP2Q7LDG7 609 aa11.93□□□□□ -0.5
ATRX-216ENST00000624403 FAM151AQ8WW52 585 aa11.93□□□□□ -0.5
ATRX-216ENST00000624403 EPAS1Q99814 870 aa11.93□□□□□ -0.5
ATRX-216ENST00000624403 FHDC1Q9C0D6 1143 aaPredicted RBP11.93□□□□□ -0.5
ATRX-216ENST00000624403 MYOZ2Q9NPC6 264 aa11.93□□□□□ -0.5
ATRX-216ENST00000624403 TMEM63CQ9P1W3 806 aa11.93□□□□□ -0.5
ATRX-216ENST00000624403 CLIP2Q9UDT6 1046 aa11.93□□□□□ -0.5
ATRX-216ENST00000624403 RCOR1Q9UKL0 485 aa11.93□□□□□ -0.5
ATRX-216ENST00000624403 ARIH1Q9Y4X5 557 aaPredicted RBP11.93□□□□□ -0.5
ATRX-216ENST00000624403 ARFGEF1Q9Y6D6 1849 aa11.93□□□□□ -0.5
ATRX-216ENST00000624403 SPDYE16A6NNV3 312 aaPredicted RBP11.92□□□□□ -0.5
ATRX-216ENST00000624403 USP17L5A8MUK1 530 aa11.92□□□□□ -0.5
ATRX-216ENST00000624403 PPP1R3GB7ZBB8 358 aa11.92□□□□□ -0.5
ATRX-216ENST00000624403 TTLL1O95922 423 aa11.92□□□□□ -0.5
ATRX-216ENST00000624403 PARP1P09874 1014 aaKnown RBP11.92□□□□□ -0.5
ATRX-216ENST00000624403 GOLGA8HP0CJ92 632 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 120.5 ms