RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 DCCP43146 1447 aa7.81□□□□□ -1.16
NEDD9-216ENST00000620854 ZEB2O60315 1214 aa7.81□□□□□ -1.16
NEDD9-216ENST00000620854 FBXW10Q5XX13 1052 aa7.81□□□□□ -1.16
NEDD9-216ENST00000620854 KCTD16Q68DU8 428 aa7.81□□□□□ -1.16
NEDD9-216ENST00000620854 ZNF772Q68DY9 489 aaPredicted RBP7.81□□□□□ -1.16
NEDD9-216ENST00000620854 GBP3Q9H0R5 595 aa7.81□□□□□ -1.16
NEDD9-216ENST00000620854 EFCC1Q9HA90 598 aa7.81□□□□□ -1.16
NEDD9-216ENST00000620854 ABHD10Q9NUJ1 306 aa7.81□□□□□ -1.16
NEDD9-216ENST00000620854 PSD3Q9NYI0 1048 aa7.81□□□□□ -1.16
NEDD9-216ENST00000620854 TTF2Q9UNY4 1162 aaKnown RBP7.81□□□□□ -1.16
NEDD9-216ENST00000620854 GOLGB1Q14789 3259 aaKnown RBP7.81□□□□□ -1.16
NEDD9-216ENST00000620854 SOS2Q07890 1332 aaPredicted RBP7.8□□□□□ -1.16
NEDD9-216ENST00000620854 POTEB2H3BUK9 544 aa7.8□□□□□ -1.16
NEDD9-216ENST00000620854 PDE8AO60658 829 aa7.8□□□□□ -1.16
NEDD9-216ENST00000620854 PDE6AP16499 860 aa7.8□□□□□ -1.16
NEDD9-216ENST00000620854 MCM7P33993 719 aa7.8□□□□□ -1.16
NEDD9-216ENST00000620854 SARSP49591 514 aaKnown RBP7.8□□□□□ -1.16
NEDD9-216ENST00000620854 C2orf54Q08AI8 447 aa7.8□□□□□ -1.16
NEDD9-216ENST00000620854 CNBD1Q8NA66 436 aa7.8□□□□□ -1.16
NEDD9-216ENST00000620854 BCAS4Q8TDM0 211 aa7.8□□□□□ -1.16
NEDD9-216ENST00000620854 SMCR8Q8TEV9 937 aaPredicted RBP7.8□□□□□ -1.16
NEDD9-216ENST00000620854 PIGBQ92521 554 aa7.8□□□□□ -1.16
NEDD9-216ENST00000620854 GREM2Q9H772 168 aa7.8□□□□□ -1.16
NEDD9-216ENST00000620854 RAB21Q9UL25 225 aa7.8□□□□□ -1.16
NEDD9-216ENST00000620854 TTC26A0AVF1 554 aa7.8□□□□□ -1.16
NEDD9-216ENST00000620854 ITGA6P23229 1130 aa7.8□□□□□ -1.16
NEDD9-216ENST00000620854 ADD2P35612 726 aa7.8□□□□□ -1.16
NEDD9-216ENST00000620854 ATP1A2P50993 1020 aa7.8□□□□□ -1.16
NEDD9-216ENST00000620854 RNASE9P60153 205 aaKnown RBP7.8□□□□□ -1.16
NEDD9-216ENST00000620854 CUL4BQ13620 913 aa7.8□□□□□ -1.16
NEDD9-216ENST00000620854 TMTC1Q8IUR5 882 aa7.8□□□□□ -1.16
NEDD9-216ENST00000620854 ZSCAN29Q8IWY8 852 aaPredicted RBP7.8□□□□□ -1.16
NEDD9-216ENST00000620854 IFNL3Q8IZI9 196 aa7.8□□□□□ -1.16
NEDD9-216ENST00000620854 ANKRD13CQ8N6S4 541 aa7.8□□□□□ -1.16
NEDD9-216ENST00000620854 HNRNPLLQ8WVV9 542 aaKnown RBP7.8□□□□□ -1.16
NEDD9-216ENST00000620854 ZBTB1Q9Y2K1 713 aa7.8□□□□□ -1.16
NEDD9-216ENST00000620854 SAR1BQ9Y6B6 198 aa7.8□□□□□ -1.16
NEDD9-216ENST00000620854 SYF2O95926 243 aaKnown RBP7.8□□□□□ -1.16
NEDD9-216ENST00000620854 EZH2Q15910 746 aaKnown RBP7.8□□□□□ -1.16
NEDD9-216ENST00000620854 CYP26C1Q6V0L0 522 aa7.8□□□□□ -1.16
NEDD9-216ENST00000620854 SND1Q7KZF4 910 aaKnown RBP eCLIP7.8□□□□□ -1.16
NEDD9-216ENST00000620854 APTXQ7Z2E3 356 aaKnown RBP7.8□□□□□ -1.16
NEDD9-216ENST00000620854 MSANTD4Q8NCY6 345 aa7.8□□□□□ -1.16
NEDD9-216ENST00000620854 SDR42E1Q8WUS8 393 aa7.8□□□□□ -1.16
NEDD9-216ENST00000620854 KAT14Q9H8E8 782 aa7.8□□□□□ -1.16
NEDD9-216ENST00000620854 SRPRBQ9Y5M8 271 aaKnown RBP7.8□□□□□ -1.16
NEDD9-216ENST00000620854 TACC3Q9Y6A5 838 aa7.8□□□□□ -1.16
NEDD9-216ENST00000620854 GOLGA6CA6NDK9 693 aa7.79□□□□□ -1.16
NEDD9-216ENST00000620854 NDUFA10O95299 355 aa7.79□□□□□ -1.16
NEDD9-216ENST00000620854 GOLGA6DP0CG33 693 aa7.79□□□□□ -1.16
NEDD9-216ENST00000620854 ERCC5P28715 1186 aaPredicted RBP7.79□□□□□ -1.16
NEDD9-216ENST00000620854 ARHGAP25P42331 645 aa7.79□□□□□ -1.16
NEDD9-216ENST00000620854 PTGDRQ13258 359 aa7.79□□□□□ -1.16
NEDD9-216ENST00000620854 HDAC7Q8WUI4 952 aa7.79□□□□□ -1.16
NEDD9-216ENST00000620854 PPM1EQ8WY54 764 aa7.79□□□□□ -1.16
NEDD9-216ENST00000620854 CTAGE1Q96RT6 745 aa7.79□□□□□ -1.16
NEDD9-216ENST00000620854 STK32BQ9NY57 414 aa7.79□□□□□ -1.16
NEDD9-216ENST00000620854 GOLGA6AQ9NYA3 693 aa7.79□□□□□ -1.16
NEDD9-216ENST00000620854 CEP131Q9UPN4 1083 aa7.79□□□□□ -1.16
NEDD9-216ENST00000620854 SLC4A4Q9Y6R1 1079 aa7.79□□□□□ -1.16
NEDD9-216ENST00000620854 PLEKHG2Q9H7P9 1386 aa7.79□□□□□ -1.16
NEDD9-216ENST00000620854 CYP2D7A0A087X1C5 515 aa7.79□□□□□ -1.16
NEDD9-216ENST00000620854 KCNJ18B7U540 433 aa7.79□□□□□ -1.16
NEDD9-216ENST00000620854 FMNL1O95466 1100 aaPredicted RBP7.79□□□□□ -1.16
NEDD9-216ENST00000620854 IDEP14735 1019 aa7.79□□□□□ -1.16
NEDD9-216ENST00000620854 TRIM21P19474 475 aaKnown RBP7.79□□□□□ -1.16
NEDD9-216ENST00000620854 SF3A3Q12874 501 aaKnown RBP eCLIP7.79□□□□□ -1.164e-6■■□□□ 12.2
NEDD9-216ENST00000620854 KCNJ12Q14500 433 aa7.79□□□□□ -1.16
NEDD9-216ENST00000620854 KANK3Q6NY19 840 aa7.79□□□□□ -1.16
NEDD9-216ENST00000620854 FAM196AQ6ZSG2 479 aa7.79□□□□□ -1.16
NEDD9-216ENST00000620854 FANCBQ8NB91 859 aa7.79□□□□□ -1.16
NEDD9-216ENST00000620854 CTCFLQ8NI51 663 aaPredicted RBP7.79□□□□□ -1.16
NEDD9-216ENST00000620854 NELFBQ8WX92 580 aa7.79□□□□□ -1.16
NEDD9-216ENST00000620854 JAKMIP2Q96AA8 810 aa7.79□□□□□ -1.16
NEDD9-216ENST00000620854 TMEM87BQ96K49 555 aa7.79□□□□□ -1.16
NEDD9-216ENST00000620854 LACRTQ9GZZ8 138 aa7.79□□□□□ -1.16
NEDD9-216ENST00000620854 GPR108Q9NPR9 543 aa7.79□□□□□ -1.16
NEDD9-216ENST00000620854 EHD2Q9NZN4 543 aa7.79□□□□□ -1.16
NEDD9-216ENST00000620854 TMOD2Q9NZR1 351 aa7.79□□□□□ -1.16
NEDD9-216ENST00000620854 LUC7L2Q9Y383 392 aaKnown RBP7.79□□□□□ -1.16
NEDD9-216ENST00000620854 LAMA4Q16363 1823 aa7.79□□□□□ -1.16
NEDD9-216ENST00000620854 LRRC37A3O60309 1634 aa7.79□□□□□ -1.16
NEDD9-216ENST00000620854 UBR1Q8IWV7 1749 aa7.79□□□□□ -1.16
NEDD9-216ENST00000620854 NALCNQ8IZF0 1738 aa7.79□□□□□ -1.16
NEDD9-216ENST00000620854 AFF2P51816 1311 aa7.79□□□□□ -1.16
NEDD9-216ENST00000620854 PPP1R3GB7ZBB8 358 aa7.79□□□□□ -1.16
NEDD9-216ENST00000620854 PPFIA4O75335 1185 aa7.79□□□□□ -1.16
NEDD9-216ENST00000620854 IL6STP40189 918 aaPredicted RBP7.79□□□□□ -1.16
NEDD9-216ENST00000620854 KLK7P49862 253 aa7.79□□□□□ -1.16
NEDD9-216ENST00000620854 COPB1P53618 953 aaKnown RBP7.79□□□□□ -1.16
NEDD9-216ENST00000620854 SPA17Q15506 151 aa7.79□□□□□ -1.16
NEDD9-216ENST00000620854 WHAMMP3Q1A5X7 153 aa7.79□□□□□ -1.16
NEDD9-216ENST00000620854 TDRD12Q587J7 1177 aaKnown RBP7.79□□□□□ -1.16
NEDD9-216ENST00000620854 KRT26Q7Z3Y9 468 aa7.79□□□□□ -1.16
NEDD9-216ENST00000620854 SEPT12Q8IYM1 358 aa7.79□□□□□ -1.16
NEDD9-216ENST00000620854 CRACR2BQ8N4Y2 399 aaPredicted RBP7.79□□□□□ -1.16
NEDD9-216ENST00000620854 FAM76AQ8TAV0 307 aa7.79□□□□□ -1.16
NEDD9-216ENST00000620854 STRBPQ96SI9 672 aaKnown RBP7.79□□□□□ -1.16
NEDD9-216ENST00000620854 LUC7LQ9NQ29 371 aaKnown RBP7.79□□□□□ -1.16
NEDD9-216ENST00000620854 AGPAT5Q9NUQ2 364 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms