RNA–Protein interactions for RNA: ENST00000620466.4

ALMS1-208, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 2

Gene ALMS1, Length 6,720 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-208ENST00000620466 SARM1Q6SZW1 724 aa9.27□□□□□ -0.92
ALMS1-208ENST00000620466 UIMC1Q96RL1 719 aa9.27□□□□□ -0.92
ALMS1-208ENST00000620466 CPS1P31327 1500 aa9.27□□□□□ -0.92
ALMS1-208ENST00000620466 NDC80O14777 642 aa9.27□□□□□ -0.93
ALMS1-208ENST00000620466 MMP1P03956 469 aa9.27□□□□□ -0.93
ALMS1-208ENST00000620466 RPL13P26373 211 aaKnown RBP9.27□□□□□ -0.93
ALMS1-208ENST00000620466 HPDP32754 393 aaPredicted RBP9.27□□□□□ -0.93
ALMS1-208ENST00000620466 SLC9C1Q4G0N8 1177 aa9.27□□□□□ -0.93
ALMS1-208ENST00000620466 GDAP1L1Q96MZ0 367 aa9.27□□□□□ -0.93
ALMS1-208ENST00000620466 ATG3Q9NT62 314 aa9.27□□□□□ -0.93
ALMS1-208ENST00000620466 PKD2L1Q9P0L9 805 aa9.27□□□□□ -0.93
ALMS1-208ENST00000620466 SCG2P13521 617 aa9.27□□□□□ -0.93
ALMS1-208ENST00000620466 MAGEA1P43355 309 aa9.27□□□□□ -0.93
ALMS1-208ENST00000620466 GPHNQ9NQX3 736 aaPredicted RBP9.27□□□□□ -0.93
ALMS1-208ENST00000620466 FAM207AQ9NSI2 230 aaPredicted RBP9.27□□□□□ -0.93
ALMS1-208ENST00000620466 ATP10DQ9P241 1426 aa9.27□□□□□ -0.93
ALMS1-208ENST00000620466 VSTM4Q8IW00 320 aa9.27□□□□□ -0.93
ALMS1-208ENST00000620466 ANKS4BQ8N8V4 417 aa9.27□□□□□ -0.93
ALMS1-208ENST00000620466 PROCA1Q8NCQ7 364 aaPredicted RBP9.27□□□□□ -0.93
ALMS1-208ENST00000620466 WDR66Q8TBY9 1149 aa9.27□□□□□ -0.93
ALMS1-208ENST00000620466 MAK16Q9BXY0 300 aaKnown RBP9.27□□□□□ -0.93
ALMS1-208ENST00000620466 IFIH1Q9BYX4 1025 aaKnown RBP9.27□□□□□ -0.93
ALMS1-208ENST00000620466 COPB1P53618 953 aaKnown RBP9.27□□□□□ -0.93
ALMS1-208ENST00000620466 SFMBT2Q5VUG0 894 aa9.27□□□□□ -0.93
ALMS1-208ENST00000620466 SND1Q7KZF4 910 aaKnown RBP eCLIP9.27□□□□□ -0.93
ALMS1-208ENST00000620466 RRAGAQ7L523 313 aa9.27□□□□□ -0.93
ALMS1-208ENST00000620466 OR8K1Q8NGG5 319 aa9.27□□□□□ -0.93
ALMS1-208ENST00000620466 CCDC26Q8TAB7 109 aa9.27□□□□□ -0.93
ALMS1-208ENST00000620466 AIFM3Q96NN9 605 aa9.27□□□□□ -0.93
ALMS1-208ENST00000620466 ADGRL3Q9HAR2 1447 aa9.27□□□□□ -0.93
ALMS1-208ENST00000620466 HEG1Q9ULI3 1381 aa9.27□□□□□ -0.93
ALMS1-208ENST00000620466 ERBB3P21860 1342 aa9.27□□□□□ -0.93
ALMS1-208ENST00000620466 PTGDRQ13258 359 aa9.27□□□□□ -0.93
ALMS1-208ENST00000620466 NELFCDQ8IXH7 590 aa9.27□□□□□ -0.93
ALMS1-208ENST00000620466 MSANTD4Q8NCY6 345 aa9.27□□□□□ -0.93
ALMS1-208ENST00000620466 TMOD4Q9NZQ9 345 aa9.27□□□□□ -0.93
ALMS1-208ENST00000620466 ODF2LQ9ULJ1 636 aa9.27□□□□□ -0.93
ALMS1-208ENST00000620466 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.27□□□□□ -0.93
ALMS1-208ENST00000620466 KIF20BQ96Q89 1820 aa9.27□□□□□ -0.93
ALMS1-208ENST00000620466 SMCO2A6NFE2 343 aa9.26□□□□□ -0.93
ALMS1-208ENST00000620466 NCAPH2Q6IBW4 605 aa9.26□□□□□ -0.93
ALMS1-208ENST00000620466 C2CD5Q86YS7 1000 aa9.26□□□□□ -0.93
ALMS1-208ENST00000620466 SMYD4Q8IYR2 804 aaPredicted RBP9.26□□□□□ -0.93
ALMS1-208ENST00000620466 FRMPD1Q5SYB0 1578 aa9.26□□□□□ -0.93
ALMS1-208ENST00000620466 KRT5P13647 590 aa9.26□□□□□ -0.93
ALMS1-208ENST00000620466 TECP42680 631 aa9.26□□□□□ -0.93
ALMS1-208ENST00000620466 HS2ST1Q7LGA3 356 aa9.26□□□□□ -0.93
ALMS1-208ENST00000620466 CPLX4Q7Z7G2 160 aa9.26□□□□□ -0.93
ALMS1-208ENST00000620466 KLHL7Q8IXQ5 586 aa9.26□□□□□ -0.93
ALMS1-208ENST00000620466 ARFGAP2Q8N6H7 521 aa9.26□□□□□ -0.93
ALMS1-208ENST00000620466 PICK1Q9NRD5 415 aa9.26□□□□□ -0.93
ALMS1-208ENST00000620466 PXDNLA1KZ92 1463 aa9.26□□□□□ -0.93
ALMS1-208ENST00000620466 INF2Q27J81 1249 aa9.26□□□□□ -0.93
ALMS1-208ENST00000620466 DHX40Q8IX18 779 aaKnown RBP9.26□□□□□ -0.93
ALMS1-208ENST00000620466 ZC3H12CQ9C0D7 883 aaKnown RBP9.26□□□□□ -0.93
ALMS1-208ENST00000620466 PIH1D3Q9NQM4 214 aaKnown RBP9.26□□□□□ -0.93
ALMS1-208ENST00000620466 FRMD4BQ9Y2L6 1034 aa9.26□□□□□ -0.93
ALMS1-208ENST00000620466 PRKAB2O43741 272 aa9.26□□□□□ -0.93
ALMS1-208ENST00000620466 ZSCAN26Q16670 478 aa9.26□□□□□ -0.93
ALMS1-208ENST00000620466 CCDC144BQ3MJ40 725 aa9.26□□□□□ -0.93
ALMS1-208ENST00000620466 CNBD1Q8NA66 436 aa9.26□□□□□ -0.93
ALMS1-208ENST00000620466 CDCA7Q9BWT1 371 aaPredicted RBP9.26□□□□□ -0.93
ALMS1-208ENST00000620466 LSM14BQ9BX40 385 aaKnown RBP9.26□□□□□ -0.93
ALMS1-208ENST00000620466 ALDH8A1Q9H2A2 487 aaPredicted RBP9.26□□□□□ -0.93
ALMS1-208ENST00000620466 TLDC2A0PJX2 215 aa9.26□□□□□ -0.93
ALMS1-208ENST00000620466 SOWAHDA6NJG2 315 aa9.26□□□□□ -0.93
ALMS1-208ENST00000620466 H7C1W4 665 aa9.26□□□□□ -0.93
ALMS1-208ENST00000620466 CHMP2AO43633 222 aa9.26□□□□□ -0.93
ALMS1-208ENST00000620466 PLEKHA4Q9H4M7 779 aa9.26□□□□□ -0.93
ALMS1-208ENST00000620466 CEP83Q9Y592 693 aa9.26□□□□□ -0.93
ALMS1-208ENST00000620466 DIP2CQ9Y2E4 1556 aa9.25□□□□□ -0.93
ALMS1-208ENST00000620466 LMTK3Q96Q04 1460 aa9.25□□□□□ -0.93
ALMS1-208ENST00000620466 H7C1D1 291 aa9.25□□□□□ -0.93
ALMS1-208ENST00000620466 TRAPPC3LQ5T215 181 aa9.25□□□□□ -0.93
ALMS1-208ENST00000620466 SEL1L2Q5TEA6 688 aa9.25□□□□□ -0.93
ALMS1-208ENST00000620466 HAUS3Q68CZ6 603 aa9.25□□□□□ -0.93
ALMS1-208ENST00000620466 SRGAP1Q7Z6B7 1085 aa9.25□□□□□ -0.93
ALMS1-208ENST00000620466 SLC35F6Q8N357 371 aa9.25□□□□□ -0.93
ALMS1-208ENST00000620466 LCORLQ8N3X6 602 aa9.25□□□□□ -0.93
ALMS1-208ENST00000620466 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.25□□□□□ -0.93
ALMS1-208ENST00000620466 CCDC114Q96M63 670 aa9.25□□□□□ -0.93
ALMS1-208ENST00000620466 NPHP4O75161 1426 aaPredicted RBP9.25□□□□□ -0.93
ALMS1-208ENST00000620466 USP31Q70CQ4 1352 aa9.25□□□□□ -0.93
ALMS1-208ENST00000620466 ERCC5P28715 1186 aaPredicted RBP9.25□□□□□ -0.93
ALMS1-208ENST00000620466 PPP1R7Q15435 360 aa9.25□□□□□ -0.93
ALMS1-208ENST00000620466 CFAP221Q4G0U5 840 aa9.25□□□□□ -0.93
ALMS1-208ENST00000620466 SPATA24Q86W54 205 aa9.25□□□□□ -0.93
ALMS1-208ENST00000620466 CCDC25Q86WR0 208 aa9.25□□□□□ -0.93
ALMS1-208ENST00000620466 CCDC117Q8IWD4 279 aaPredicted RBP9.25□□□□□ -0.93
ALMS1-208ENST00000620466 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.25□□□□□ -0.93
ALMS1-208ENST00000620466 SAMSN1Q9NSI8 373 aaKnown RBP9.25□□□□□ -0.93
ALMS1-208ENST00000620466 TSKSQ9UJT2 592 aa9.25□□□□□ -0.93
ALMS1-208ENST00000620466 ASAP1Q9ULH1 1129 aa9.25□□□□□ -0.93
ALMS1-208ENST00000620466 CETN3O15182 167 aa9.25□□□□□ -0.93
ALMS1-208ENST00000620466 LONP1P36776 959 aaKnown RBP9.25□□□□□ -0.93
ALMS1-208ENST00000620466 RAD51AP2Q09MP3 1159 aa9.25□□□□□ -0.93
ALMS1-208ENST00000620466 PDE11AQ9HCR9 933 aa9.25□□□□□ -0.93
ALMS1-208ENST00000620466 MTRF1LQ9UGC7 380 aaKnown RBP9.25□□□□□ -0.93
ALMS1-208ENST00000620466 GGA1Q9UJY5 639 aa9.25□□□□□ -0.93
ALMS1-208ENST00000620466 USP32Q8NFA0 1604 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms