RNA–Protein interactions for RNA: ENST00000620394.1

SRRT-218, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-218ENST00000620394 SHCBP1Q8NEM2 672 aa26.45■■□□□ 1.82
SRRT-218ENST00000620394 STRBPQ96SI9 672 aaKnown RBP26.45■■□□□ 1.82
SRRT-218ENST00000620394 PRDM5Q9NQX1 630 aaPredicted RBP26.45■■□□□ 1.82
SRRT-218ENST00000620394 TMX2Q9Y320 296 aa26.45■■□□□ 1.82
SRRT-218ENST00000620394 ROBO3Q96MS0 1386 aa26.45■■□□□ 1.82
SRRT-218ENST00000620394 TTC41PQ6P2S7 1318 aa26.44■■□□□ 1.82
SRRT-218ENST00000620394 SEPT4O43236 478 aa26.44■■□□□ 1.82
SRRT-218ENST00000620394 RRP1P56182 461 aaKnown RBP26.44■■□□□ 1.82
SRRT-218ENST00000620394 KIAA1755Q5JYT7 1200 aa26.44■■□□□ 1.82
SRRT-218ENST00000620394 SLC39A5Q6ZMH5 540 aa26.44■■□□□ 1.82
SRRT-218ENST00000620394 APPBP2Q92624 585 aa26.44■■□□□ 1.82
SRRT-218ENST00000620394 MOV10L1Q9BXT6 1211 aaKnown RBP26.44■■□□□ 1.82
SRRT-218ENST00000620394 SH2D4AQ9H788 454 aa26.44■■□□□ 1.82
SRRT-218ENST00000620394 ARHGEF10LQ9HCE6 1279 aa26.44■■□□□ 1.82
SRRT-218ENST00000620394 SLC5A4Q9NY91 659 aa26.44■■□□□ 1.82
SRRT-218ENST00000620394 COG2Q14746 738 aa26.43■■□□□ 1.82
SRRT-218ENST00000620394 SHHQ15465 462 aa26.43■■□□□ 1.82
SRRT-218ENST00000620394 SBK1Q52WX2 424 aa26.43■■□□□ 1.82
SRRT-218ENST00000620394 GIMAP6Q6P9H5 292 aa26.43■■□□□ 1.82
SRRT-218ENST00000620394 OSBP2Q969R2 916 aa26.43■■□□□ 1.82
SRRT-218ENST00000620394 CDX2Q99626 313 aaPredicted RBP26.43■■□□□ 1.82
SRRT-218ENST00000620394 TANGO6Q9C0B7 1094 aa26.43■■□□□ 1.82
SRRT-218ENST00000620394 SPATC1LQ9H0A9 340 aa26.43■■□□□ 1.82
SRRT-218ENST00000620394 VCPKMTQ9H867 229 aa26.43■■□□□ 1.82
SRRT-218ENST00000620394 HOXC10Q9NYD6 342 aa26.43■■□□□ 1.82
SRRT-218ENST00000620394 COL11A1P12107 1806 aaPredicted RBP26.42■■□□□ 1.82
SRRT-218ENST00000620394 ZFYP08048 801 aaPredicted RBP26.42■■□□□ 1.82
SRRT-218ENST00000620394 MB21D1Q8N884 522 aa26.42■■□□□ 1.82
SRRT-218ENST00000620394 GSG1L2A8MUP6 293 aa26.41■■□□□ 1.82
SRRT-218ENST00000620394 RNF113AO15541 343 aaKnown RBP26.41■■□□□ 1.82
SRRT-218ENST00000620394 ERCC3P19447 782 aa26.41■■□□□ 1.82
SRRT-218ENST00000620394 SMAD3P84022 425 aaKnown RBP26.41■■□□□ 1.82
SRRT-218ENST00000620394 TRIM60Q495X7 471 aa26.41■■□□□ 1.82
SRRT-218ENST00000620394 C9orf50Q5SZB4 431 aa26.41■■□□□ 1.82
SRRT-218ENST00000620394 C1orf53Q5VUE5 145 aa26.41■■□□□ 1.82
SRRT-218ENST00000620394 MAFAQ8NHW3 353 aaPredicted RBP26.41■■□□□ 1.82
SRRT-218ENST00000620394 PDLIM7Q9NR12 457 aa26.41■■□□□ 1.82
SRRT-218ENST00000620394 LAMA2P24043 3122 aaKnown RBP26.41■■□□□ 1.82
SRRT-218ENST00000620394 WDR46O15213 610 aaKnown RBP26.4■■□□□ 1.82
SRRT-218ENST00000620394 PI4K2BQ8TCG2 481 aa26.4■■□□□ 1.82
SRRT-218ENST00000620394 KANSL2Q9H9L4 492 aa26.4■■□□□ 1.82
SRRT-218ENST00000620394 ANO1Q5XXA6 986 aa26.39■■□□□ 1.82
SRRT-218ENST00000620394 ABRAQ8N0Z2 381 aa26.39■■□□□ 1.82
SRRT-218ENST00000620394 BADQ92934 168 aa26.39■■□□□ 1.82
SRRT-218ENST00000620394 SEMA6BQ9H3T3 888 aa26.39■■□□□ 1.82
SRRT-218ENST00000620394 MROH8Q9H579 483 aa26.39■■□□□ 1.82
SRRT-218ENST00000620394 GPAA1O43292 621 aa26.38■■□□□ 1.81
SRRT-218ENST00000620394 COBLO75128 1261 aa26.38■■□□□ 1.81
SRRT-218ENST00000620394 DSG3P32926 999 aa26.38■■□□□ 1.81
SRRT-218ENST00000620394 GNL3Q9BVP2 549 aaKnown RBP eCLIP26.38■■□□□ 1.81
SRRT-218ENST00000620394 EPB41L4AQ9HCS5 686 aaPredicted RBP26.38■■□□□ 1.81
SRRT-218ENST00000620394 SALL3Q9BXA9 1300 aa26.38■■□□□ 1.81
SRRT-218ENST00000620394 PLXNA1Q9UIW2 1896 aa26.37■■□□□ 1.81
SRRT-218ENST00000620394 ERC2O15083 957 aa26.37■■□□□ 1.81
SRRT-218ENST00000620394 MYCNP04198 464 aaPredicted RBP26.37■■□□□ 1.81
SRRT-218ENST00000620394 EEF2P13639 858 aaKnown RBP26.37■■□□□ 1.81
SRRT-218ENST00000620394 LRRC41Q15345 812 aa26.37■■□□□ 1.81
SRRT-218ENST00000620394 SPICE1Q8N0Z3 855 aa26.37■■□□□ 1.81
SRRT-218ENST00000620394 OTUD7AQ8TE49 926 aaPredicted RBP26.37■■□□□ 1.81
SRRT-218ENST00000620394 ZNFX1Q9P2E3 1918 aaKnown RBP26.37■■□□□ 1.81
SRRT-218ENST00000620394 MYH4Q9Y623 1939 aa26.37■■□□□ 1.81
SRRT-218ENST00000620394 M0R2C6 588 aa26.36■■□□□ 1.81
SRRT-218ENST00000620394 FLOT1O75955 427 aa26.36■■□□□ 1.81
SRRT-218ENST00000620394 GNAT2P19087 354 aa26.36■■□□□ 1.81
SRRT-218ENST00000620394 RASA1P20936 1047 aa26.36■■□□□ 1.81
SRRT-218ENST00000620394 ADCYAP1R1P41586 468 aa26.36■■□□□ 1.81
SRRT-218ENST00000620394 LRRFIP1Q32MZ4 808 aaKnown RBP26.36■■□□□ 1.81
SRRT-218ENST00000620394 FAM47AQ5JRC9 791 aa26.36■■□□□ 1.81
SRRT-218ENST00000620394 EYSQ5T1H1 3165 aa26.35■■□□□ 1.81
SRRT-218ENST00000620394 TMEM265A0A087WTH1 108 aa26.35■■□□□ 1.81
SRRT-218ENST00000620394 PLS1Q14651 629 aa26.35■■□□□ 1.81
SRRT-218ENST00000620394 NCAPG2Q86XI2 1143 aa26.35■■□□□ 1.81
SRRT-218ENST00000620394 ATG4CQ96DT6 458 aa26.35■■□□□ 1.81
SRRT-218ENST00000620394 MAML3Q96JK9 1138 aa26.35■■□□□ 1.81
SRRT-218ENST00000620394 TTYH1Q9H313 450 aaPredicted RBP26.35■■□□□ 1.81
SRRT-218ENST00000620394 NRBP1Q9UHY1 535 aa26.35■■□□□ 1.81
SRRT-218ENST00000620394 ADAMTS5Q9UNA0 930 aa26.35■■□□□ 1.81
SRRT-218ENST00000620394 VCANP13611 3396 aa26.34■■□□□ 1.81
SRRT-218ENST00000620394 TRIM43BA6NCK2 446 aa26.34■■□□□ 1.81
SRRT-218ENST00000620394 MX1P20591 662 aa26.34■■□□□ 1.81
SRRT-218ENST00000620394 MYLIPQ8WY64 445 aa26.34■■□□□ 1.81
SRRT-218ENST00000620394 FERMT2Q96AC1 680 aa26.34■■□□□ 1.81
SRRT-218ENST00000620394 TRIM43Q96BQ3 446 aaPredicted RBP26.34■■□□□ 1.81
SRRT-218ENST00000620394 PHF24Q9UPV7 400 aa26.34■■□□□ 1.81
SRRT-218ENST00000620394 CDH23Q9H251 3354 aa26.33■■□□□ 1.81
SRRT-218ENST00000620394 FOSL2P15408 326 aa26.33■■□□□ 1.81
SRRT-218ENST00000620394 SH3RF1Q7Z6J0 888 aa26.33■■□□□ 1.81
SRRT-218ENST00000620394 GOPCQ9HD26 462 aa26.33■■□□□ 1.81
SRRT-218ENST00000620394 RARBP10826 455 aa26.32■■□□□ 1.8
SRRT-218ENST00000620394 FCER1AP12319 257 aa26.32■■□□□ 1.8
SRRT-218ENST00000620394 PRAMEF19Q5SWL8 479 aa26.32■■□□□ 1.8
SRRT-218ENST00000620394 RNPC3Q96LT9 517 aaKnown RBP26.32■■□□□ 1.8
SRRT-218ENST00000620394 CRBNQ96SW2 442 aa26.32■■□□□ 1.8
SRRT-218ENST00000620394 XPNPEP3Q9NQH7 507 aa26.32■■□□□ 1.8
SRRT-218ENST00000620394 TACC3Q9Y6A5 838 aa26.32■■□□□ 1.8
SRRT-218ENST00000620394 PLIN4Q96Q06 1357 aa26.32■■□□□ 1.8
SRRT-218ENST00000620394 SLC25A27O95847 323 aa26.31■■□□□ 1.8
SRRT-218ENST00000620394 CLTBP09497 229 aa26.31■■□□□ 1.8
SRRT-218ENST00000620394 TLE2Q04725 743 aa26.31■■□□□ 1.8
SRRT-218ENST00000620394 NYAP2Q9P242 653 aa26.31■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms