RNA–Protein interactions for RNA: ENST00000619555.4

TARDBP-221, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-221ENST00000619555 TMEM132BQ14DG7 1078 aa13.39□□□□□ -0.27
TARDBP-221ENST00000619555 PRAMEF19Q5SWL8 479 aa13.39□□□□□ -0.27
TARDBP-221ENST00000619555 ANO1Q5XXA6 986 aa13.39□□□□□ -0.27
TARDBP-221ENST00000619555 OLFML2BQ68BL8 750 aa13.39□□□□□ -0.27
TARDBP-221ENST00000619555 KBTBD3Q8NAB2 608 aa13.39□□□□□ -0.27
TARDBP-221ENST00000619555 OSBP2Q969R2 916 aa13.39□□□□□ -0.27
TARDBP-221ENST00000619555 MROH8Q9H579 483 aa13.39□□□□□ -0.27
TARDBP-221ENST00000619555 KANSL2Q9H9L4 492 aa13.39□□□□□ -0.27
TARDBP-221ENST00000619555 COL11A1P12107 1806 aaPredicted RBP13.39□□□□□ -0.27
TARDBP-221ENST00000619555 MINDY4BA8MYZ0 360 aa13.38□□□□□ -0.27
TARDBP-221ENST00000619555 RAD21O60216 631 aa13.38□□□□□ -0.27
TARDBP-221ENST00000619555 MSCO60682 206 aa13.38□□□□□ -0.27
TARDBP-221ENST00000619555 ATN1P54259 1190 aaPredicted RBP13.38□□□□□ -0.27
TARDBP-221ENST00000619555 ARPP21Q9UBL0 812 aaPredicted RBP13.38□□□□□ -0.27
TARDBP-221ENST00000619555 ADAMTS5Q9UNA0 930 aa13.38□□□□□ -0.27
TARDBP-221ENST00000619555 ZNF236Q9UL36 1845 aa13.38□□□□□ -0.27
TARDBP-221ENST00000619555 RNF113AO15541 343 aaKnown RBP13.37□□□□□ -0.27
TARDBP-221ENST00000619555 RASA1P20936 1047 aa13.37□□□□□ -0.27
TARDBP-221ENST00000619555 MDM2Q00987 491 aaPredicted RBP13.37□□□□□ -0.27
TARDBP-221ENST00000619555 SBK1Q52WX2 424 aa13.37□□□□□ -0.27
TARDBP-221ENST00000619555 FAM83BQ5T0W9 1011 aa13.37□□□□□ -0.27
TARDBP-221ENST00000619555 GJC2Q5T442 439 aaPredicted RBP13.37□□□□□ -0.27
TARDBP-221ENST00000619555 ABRAQ8N0Z2 381 aa13.37□□□□□ -0.27
TARDBP-221ENST00000619555 APPBP2Q92624 585 aa13.37□□□□□ -0.27
TARDBP-221ENST00000619555 UBE2OQ9C0C9 1292 aaKnown RBP13.37□□□□□ -0.27
TARDBP-221ENST00000619555 GOPCQ9HD26 462 aa13.37□□□□□ -0.27
TARDBP-221ENST00000619555 PCDHB15Q9Y5E8 787 aa13.37□□□□□ -0.27
TARDBP-221ENST00000619555 M0R2C6 588 aa13.36□□□□□ -0.27
TARDBP-221ENST00000619555 DNM1LO00429 736 aa13.36□□□□□ -0.27
TARDBP-221ENST00000619555 VWA5AO00534 786 aa13.36□□□□□ -0.27
TARDBP-221ENST00000619555 GPAA1O43292 621 aa13.36□□□□□ -0.27
TARDBP-221ENST00000619555 SLC25A27O95847 323 aa13.36□□□□□ -0.27
TARDBP-221ENST00000619555 FCER1AP12319 257 aa13.36□□□□□ -0.27
TARDBP-221ENST00000619555 STAT3P40763 770 aa13.36□□□□□ -0.27
TARDBP-221ENST00000619555 TDHQ8IZJ6 230 aa13.36□□□□□ -0.27
TARDBP-221ENST00000619555 GPATCH3Q96I76 525 aa13.36□□□□□ -0.27
TARDBP-221ENST00000619555 MAML3Q96JK9 1138 aa13.36□□□□□ -0.27
TARDBP-221ENST00000619555 NUP88Q99567 741 aaPredicted RBP13.36□□□□□ -0.27
TARDBP-221ENST00000619555 MKNK2Q9HBH9 465 aa13.36□□□□□ -0.27
TARDBP-221ENST00000619555 EPB41L4AQ9HCS5 686 aaPredicted RBP13.36□□□□□ -0.27
TARDBP-221ENST00000619555 SLC5A4Q9NY91 659 aa13.36□□□□□ -0.27
TARDBP-221ENST00000619555 PPP1R9AQ9ULJ8 1098 aa13.36□□□□□ -0.27
TARDBP-221ENST00000619555 GREB1LQ9C091 1923 aaPredicted RBP13.35□□□□□ -0.27
TARDBP-221ENST00000619555 SEPT4O43236 478 aa13.35□□□□□ -0.27
TARDBP-221ENST00000619555 MYCNP04198 464 aaPredicted RBP13.35□□□□□ -0.27
TARDBP-221ENST00000619555 PGK2P07205 417 aa13.35□□□□□ -0.27
TARDBP-221ENST00000619555 GIMAP6Q6P9H5 292 aa13.35□□□□□ -0.27
TARDBP-221ENST00000619555 RIOX2Q8IUF8 465 aa13.35□□□□□ -0.27
TARDBP-221ENST00000619555 ARRDC4Q8NCT1 418 aa13.35□□□□□ -0.27
TARDBP-221ENST00000619555 REPS2Q8NFH8 660 aa13.35□□□□□ -0.27
TARDBP-221ENST00000619555 OTUD7AQ8TE49 926 aaPredicted RBP13.35□□□□□ -0.27
TARDBP-221ENST00000619555 MMP19Q99542 508 aa13.35□□□□□ -0.27
TARDBP-221ENST00000619555 RNF39Q9H2S5 420 aa13.35□□□□□ -0.27
TARDBP-221ENST00000619555 ZNF214Q9UL59 606 aaPredicted RBP13.35□□□□□ -0.27
TARDBP-221ENST00000619555 F5H6K3 240 aa13.34□□□□□ -0.27
TARDBP-221ENST00000619555 PRDM1O75626 825 aa13.34□□□□□ -0.27
TARDBP-221ENST00000619555 NDUFB10O96000 172 aa13.34□□□□□ -0.27
TARDBP-221ENST00000619555 APPP05067 770 aa13.34□□□□□ -0.27
TARDBP-221ENST00000619555 ZFYP08048 801 aaPredicted RBP13.34□□□□□ -0.27
TARDBP-221ENST00000619555 TDO2P48775 406 aa13.34□□□□□ -0.27
TARDBP-221ENST00000619555 RTP1P59025 263 aa13.34□□□□□ -0.27
TARDBP-221ENST00000619555 IRX6P78412 446 aaPredicted RBP13.34□□□□□ -0.27
TARDBP-221ENST00000619555 KLRC3Q07444 240 aa13.34□□□□□ -0.27
TARDBP-221ENST00000619555 LRIT3Q3SXY7 679 aa13.34□□□□□ -0.27
TARDBP-221ENST00000619555 EXOC6Q8TAG9 804 aa13.34□□□□□ -0.27
TARDBP-221ENST00000619555 SEC62Q99442 399 aaKnown RBP13.34□□□□□ -0.27
TARDBP-221ENST00000619555 NYAP2Q9P242 653 aa13.34□□□□□ -0.27
TARDBP-221ENST00000619555 CLIP2Q9UDT6 1046 aa13.34□□□□□ -0.27
TARDBP-221ENST00000619555 COL6A3P12111 3177 aa13.34□□□□□ -0.27
TARDBP-221ENST00000619555 ROBO3Q96MS0 1386 aa13.33□□□□□ -0.27
TARDBP-221ENST00000619555 IGKV6D-41A0A0C4DH26 115 aa13.33□□□□□ -0.28
TARDBP-221ENST00000619555 PATL2C9JE40 543 aaKnown RBP13.33□□□□□ -0.28
TARDBP-221ENST00000619555 TAL1P17542 331 aaPredicted RBP13.33□□□□□ -0.28
TARDBP-221ENST00000619555 GNAT2P19087 354 aa13.33□□□□□ -0.28
TARDBP-221ENST00000619555 KCTD2Q14681 263 aa13.33□□□□□ -0.28
TARDBP-221ENST00000619555 ZNF792Q3KQV3 632 aa13.33□□□□□ -0.28
TARDBP-221ENST00000619555 FAM47AQ5JRC9 791 aa13.33□□□□□ -0.28
TARDBP-221ENST00000619555 SLC39A5Q6ZMH5 540 aa13.33□□□□□ -0.28
TARDBP-221ENST00000619555 Q7L0L9 218 aa13.33□□□□□ -0.28
TARDBP-221ENST00000619555 IFNL3Q8IZI9 196 aa13.33□□□□□ -0.28
TARDBP-221ENST00000619555 SLF1Q9BQI6 1058 aa13.33□□□□□ -0.28
TARDBP-221ENST00000619555 ATP11BQ9Y2G3 1177 aa13.33□□□□□ -0.28
TARDBP-221ENST00000619555 PLXNA1Q9UIW2 1896 aa13.33□□□□□ -0.28
TARDBP-221ENST00000619555 MYH4Q9Y623 1939 aa13.33□□□□□ -0.28
TARDBP-221ENST00000619555 KBTBD13C9JR72 458 aa13.32□□□□□ -0.28
TARDBP-221ENST00000619555 ADCYAP1R1P41586 468 aa13.32□□□□□ -0.28
TARDBP-221ENST00000619555 SLC4A3P48751 1232 aa13.32□□□□□ -0.28
TARDBP-221ENST00000619555 LRRC41Q15345 812 aa13.32□□□□□ -0.28
TARDBP-221ENST00000619555 ZNF444Q8N0Y2 327 aaPredicted RBP13.32□□□□□ -0.28
TARDBP-221ENST00000619555 DEFB123Q8N688 67 aa13.32□□□□□ -0.28
TARDBP-221ENST00000619555 PI4K2BQ8TCG2 481 aa13.32□□□□□ -0.28
TARDBP-221ENST00000619555 FERMT2Q96AC1 680 aa13.32□□□□□ -0.28
TARDBP-221ENST00000619555 LBHD1Q9BQE6 289 aaPredicted RBP13.32□□□□□ -0.28
TARDBP-221ENST00000619555 TINF2Q9BSI4 451 aa13.32□□□□□ -0.28
TARDBP-221ENST00000619555 DIS3Q9Y2L1 958 aaKnown RBP13.32□□□□□ -0.28
TARDBP-221ENST00000619555 RIPK3Q9Y572 518 aa13.32□□□□□ -0.28
TARDBP-221ENST00000619555 TTC41PQ6P2S7 1318 aa13.32□□□□□ -0.28
TARDBP-221ENST00000619555 CUL9Q8IWT3 2517 aa13.31□□□□□ -0.28
TARDBP-221ENST00000619555 COPB2P35606 906 aa13.31□□□□□ -0.28
TARDBP-221ENST00000619555 TRIM60Q495X7 471 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms