RNA–Protein interactions for RNA: ENST00000618562.1

VEGFC-202, Transcript of vascular endothelial growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VEGFC, Length 2,064 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFC-202ENST00000618562 PPP6R2O75170 966 aa29.05■■■□□ 2.24
VEGFC-202ENST00000618562 NPM3O75607 178 aaKnown RBP29.05■■■□□ 2.24
VEGFC-202ENST00000618562 NR5A1Q13285 461 aa29.05■■■□□ 2.24
VEGFC-202ENST00000618562 PRMT6Q96LA8 375 aaPredicted RBP29.05■■■□□ 2.24
VEGFC-202ENST00000618562 BPIFA3Q9BQP9 254 aa29.05■■■□□ 2.24
VEGFC-202ENST00000618562 TDRD3Q9H7E2 651 aaKnown RBP29.05■■■□□ 2.24
VEGFC-202ENST00000618562 MTMR7Q9Y216 660 aa29.05■■■□□ 2.24
VEGFC-202ENST00000618562 GREB1LQ9C091 1923 aaPredicted RBP29.05■■■□□ 2.24
VEGFC-202ENST00000618562 IGKV6D-41A0A0C4DH26 115 aa29.05■■■□□ 2.24
VEGFC-202ENST00000618562 DDTLA6NHG4 134 aaPredicted RBP29.05■■■□□ 2.24
VEGFC-202ENST00000618562 SLURP2P0DP57 97 aa29.05■■■□□ 2.24
VEGFC-202ENST00000618562 TOP1P11387 765 aaKnown RBP29.05■■■□□ 2.24
VEGFC-202ENST00000618562 DHX36Q9H2U1 1008 aaKnown RBP29.05■■■□□ 2.24
VEGFC-202ENST00000618562 ZNF202O95125 648 aa29.04■■■□□ 2.24
VEGFC-202ENST00000618562 ZRSR1Q15695 479 aaKnown RBP29.04■■■□□ 2.24
VEGFC-202ENST00000618562 SLC35G1Q2M3R5 365 aa29.04■■■□□ 2.24
VEGFC-202ENST00000618562 SH3BP5LQ7L8J4 393 aa29.04■■■□□ 2.24
VEGFC-202ENST00000618562 RASGRP2Q7LDG7 609 aa29.04■■■□□ 2.24
VEGFC-202ENST00000618562 DNAJC18Q9H819 358 aa29.04■■■□□ 2.24
VEGFC-202ENST00000618562 MTMR4Q9NYA4 1195 aa29.04■■■□□ 2.24
VEGFC-202ENST00000618562 PPP1R1BQ9UD71 204 aaPredicted RBP29.04■■■□□ 2.24
VEGFC-202ENST00000618562 NRBP1Q9UHY1 535 aa29.04■■■□□ 2.24
VEGFC-202ENST00000618562 PALM3A6NDB9 673 aaPredicted RBP29.03■■■□□ 2.24
VEGFC-202ENST00000618562 SCG2P13521 617 aa29.03■■■□□ 2.24
VEGFC-202ENST00000618562 GNAQP50148 359 aa29.03■■■□□ 2.24
VEGFC-202ENST00000618562 PFKFB3Q16875 520 aaPredicted RBP29.03■■■□□ 2.24
VEGFC-202ENST00000618562 TIGD1Q96MW7 591 aa29.03■■■□□ 2.24
VEGFC-202ENST00000618562 VEGFAP15692 232 aaPredicted RBP29.03■■■□□ 2.24
VEGFC-202ENST00000618562 PFKFB1P16118 471 aa29.03■■■□□ 2.24
VEGFC-202ENST00000618562 ZNRF3Q9ULT6 936 aa29.03■■■□□ 2.24
VEGFC-202ENST00000618562 PTPAQ15257 358 aa29.02■■■□□ 2.24
VEGFC-202ENST00000618562 NIM1KQ8IY84 436 aa29.02■■■□□ 2.24
VEGFC-202ENST00000618562 TOB1P50616 345 aaPredicted RBP29.01■■■□□ 2.24
VEGFC-202ENST00000618562 NPY5RQ15761 445 aa29.01■■■□□ 2.24
VEGFC-202ENST00000618562 GTF2F1P35269 517 aaKnown RBP eCLIP29.01■■■□□ 2.23
VEGFC-202ENST00000618562 AOPEPQ8N6M6 819 aa29.01■■■□□ 2.23
VEGFC-202ENST00000618562 ZBTB12Q9Y330 459 aaPredicted RBP29.01■■■□□ 2.23
VEGFC-202ENST00000618562 FAM237AA0A1B0GTK4 181 aa29■■■□□ 2.23
VEGFC-202ENST00000618562 CYTH3O43739 400 aa29■■■□□ 2.23
VEGFC-202ENST00000618562 NEMFO60524 1076 aa29■■■□□ 2.23
VEGFC-202ENST00000618562 GOLGA8HP0CJ92 632 aa29■■■□□ 2.23
VEGFC-202ENST00000618562 CLEC10AQ8IUN9 316 aa29■■■□□ 2.23
VEGFC-202ENST00000618562 PI4KBQ9UBF8 816 aa29■■■□□ 2.23
VEGFC-202ENST00000618562 KRT2P35908 639 aa29■■■□□ 2.23
VEGFC-202ENST00000618562 MAP7D2Q96T17 732 aa29■■■□□ 2.23
VEGFC-202ENST00000618562 EIF4ENIF1Q9NRA8 985 aaKnown RBP29■■■□□ 2.23
VEGFC-202ENST00000618562 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP28.99■■■□□ 2.23
VEGFC-202ENST00000618562 SPDYE2BA6NHP3 402 aa28.99■■■□□ 2.23
VEGFC-202ENST00000618562 SPDYE6P0CI01 402 aa28.99■■■□□ 2.23
VEGFC-202ENST00000618562 LRMPQ12912 555 aa28.99■■■□□ 2.23
VEGFC-202ENST00000618562 ZSCAN29Q8IWY8 852 aaPredicted RBP28.99■■■□□ 2.23
VEGFC-202ENST00000618562 ERCC4Q92889 916 aaPredicted RBP28.99■■■□□ 2.23
VEGFC-202ENST00000618562 UPF1Q92900 1129 aaKnown RBP eCLIP28.99■■■□□ 2.23
VEGFC-202ENST00000618562 PDCL3Q9H2J4 239 aa28.99■■■□□ 2.23
VEGFC-202ENST00000618562 TAOK3Q9H2K8 898 aa28.99■■■□□ 2.23
VEGFC-202ENST00000618562 HPSEQ9Y251 543 aa28.99■■■□□ 2.23
VEGFC-202ENST00000618562 FAM196BA6NMK8 535 aa28.98■■■□□ 2.23
VEGFC-202ENST00000618562 CCDC144BQ3MJ40 725 aa28.98■■■□□ 2.23
VEGFC-202ENST00000618562 ATRNL1Q5VV63 1379 aa28.98■■■□□ 2.23
VEGFC-202ENST00000618562 A0A087WWV3 80 aa28.98■■■□□ 2.23
VEGFC-202ENST00000618562 KLRF2D3W0D1 207 aa28.98■■■□□ 2.23
VEGFC-202ENST00000618562 ENTPD3O75355 529 aa28.98■■■□□ 2.23
VEGFC-202ENST00000618562 PARP1P09874 1014 aaKnown RBP28.98■■■□□ 2.23
VEGFC-202ENST00000618562 MARCKSP29966 332 aaPredicted RBP28.98■■■□□ 2.23
VEGFC-202ENST00000618562 NLRP12P59046 1061 aa28.98■■■□□ 2.23
VEGFC-202ENST00000618562 RILPL1Q5EBL4 403 aa28.98■■■□□ 2.23
VEGFC-202ENST00000618562 USP17L2Q6R6M4 530 aa28.98■■■□□ 2.23
VEGFC-202ENST00000618562 LZTS2Q9BRK4 669 aa28.98■■■□□ 2.23
VEGFC-202ENST00000618562 CD2APQ9Y5K6 639 aa28.98■■■□□ 2.23
VEGFC-202ENST00000618562 EIF6P56537 245 aaKnown RBP28.97■■■□□ 2.23
VEGFC-202ENST00000618562 DPCR1Q3MIW9 517 aa28.97■■■□□ 2.23
VEGFC-202ENST00000618562 CACTINQ8WUQ7 758 aaKnown RBP28.97■■■□□ 2.23
VEGFC-202ENST00000618562 HDAC9Q9UKV0 1011 aa28.97■■■□□ 2.23
VEGFC-202ENST00000618562 MYH4Q9Y623 1939 aa28.97■■■□□ 2.23
VEGFC-202ENST00000618562 PSDA5PKW4 1024 aaPredicted RBP28.97■■■□□ 2.23
VEGFC-202ENST00000618562 NFKBIEO00221 500 aa28.97■■■□□ 2.23
VEGFC-202ENST00000618562 SYKP43405 635 aa28.97■■■□□ 2.23
VEGFC-202ENST00000618562 CXCL9Q07325 125 aa28.97■■■□□ 2.23
VEGFC-202ENST00000618562 TNFRSF25Q93038 417 aa28.97■■■□□ 2.23
VEGFC-202ENST00000618562 CCDC17Q96LX7 622 aa28.97■■■□□ 2.23
VEGFC-202ENST00000618562 TTLL1O95922 423 aa28.96■■■□□ 2.23
VEGFC-202ENST00000618562 PTGER2P43116 358 aa28.96■■■□□ 2.23
VEGFC-202ENST00000618562 EARS2Q5JPH6 523 aaKnown RBP28.96■■■□□ 2.23
VEGFC-202ENST00000618562 LRRC47Q8N1G4 583 aaKnown RBP28.96■■■□□ 2.23
VEGFC-202ENST00000618562 SPZ1Q9BXG8 430 aa28.96■■■□□ 2.23
VEGFC-202ENST00000618562 CPVLQ9H3G5 476 aa28.96■■■□□ 2.23
VEGFC-202ENST00000618562 CABP5Q9NP86 173 aa28.96■■■□□ 2.23
VEGFC-202ENST00000618562 COL2A1P02458 1487 aaPredicted RBP28.96■■■□□ 2.23
VEGFC-202ENST00000618562 FAM205CA6NFA0 338 aa28.95■■■□□ 2.23
VEGFC-202ENST00000618562 USP17L5A8MUK1 530 aa28.95■■■□□ 2.23
VEGFC-202ENST00000618562 CUTAO60888 179 aa28.95■■■□□ 2.23
VEGFC-202ENST00000618562 RESP18Q5W5W9 173 aa28.95■■■□□ 2.23
VEGFC-202ENST00000618562 MTERF4Q7Z6M4 381 aaKnown RBP28.95■■■□□ 2.23
VEGFC-202ENST00000618562 OGFOD1Q8N543 542 aa28.95■■■□□ 2.23
VEGFC-202ENST00000618562 GPKOWQ92917 476 aaPredicted RBP eCLIP28.95■■■□□ 2.23
VEGFC-202ENST00000618562 MPHOSPH10O00566 681 aaKnown RBP28.95■■■□□ 2.22
VEGFC-202ENST00000618562 PDHBP11177 359 aa28.95■■■□□ 2.22
VEGFC-202ENST00000618562 DLGAP5Q15398 846 aa28.95■■■□□ 2.22
VEGFC-202ENST00000618562 AGBL3Q8NEM8 1001 aa28.95■■■□□ 2.22
VEGFC-202ENST00000618562 SHC4Q6S5L8 630 aa28.94■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms