RNA–Protein interactions for RNA: ENST00000617546.4

CUL4A-212, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 5,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-212ENST00000617546 GUCY2FP51841 1108 aa11.33□□□□□ -0.6
CUL4A-212ENST00000617546 MRPL12P52815 198 aaKnown RBP11.33□□□□□ -0.6
CUL4A-212ENST00000617546 NNTQ13423 1086 aa11.33□□□□□ -0.6
CUL4A-212ENST00000617546 NONOQ15233 471 aaKnown RBP eCLIP11.33□□□□□ -0.63e-6■□□□□ 9
CUL4A-212ENST00000617546 VAT1LQ9HCJ6 419 aa11.33□□□□□ -0.6
CUL4A-212ENST00000617546 PCDHA5Q9Y5H7 936 aa11.33□□□□□ -0.6
CUL4A-212ENST00000617546 FAM169AQ9Y6X4 670 aa11.33□□□□□ -0.6
CUL4A-212ENST00000617546 ZNF608Q9ULD9 1512 aaPredicted RBP11.33□□□□□ -0.6
CUL4A-212ENST00000617546 A0A0D9SFI3 127 aa11.33□□□□□ -0.6
CUL4A-212ENST00000617546 NR1D1P20393 614 aa11.33□□□□□ -0.6
CUL4A-212ENST00000617546 RBL2Q08999 1139 aa11.33□□□□□ -0.6
CUL4A-212ENST00000617546 OTUD7BQ6GQQ9 843 aa11.33□□□□□ -0.6
CUL4A-212ENST00000617546 CABP7Q86V35 215 aa11.33□□□□□ -0.6
CUL4A-212ENST00000617546 CALR3Q96L12 384 aaKnown RBP11.33□□□□□ -0.6
CUL4A-212ENST00000617546 RABEP2Q9H5N1 569 aa11.33□□□□□ -0.6
CUL4A-212ENST00000617546 BATF3Q9NR55 127 aa11.33□□□□□ -0.6
CUL4A-212ENST00000617546 MED23Q9ULK4 1368 aa11.32□□□□□ -0.6
CUL4A-212ENST00000617546 MBD4O95243 580 aa11.32□□□□□ -0.6
CUL4A-212ENST00000617546 CLTAP09496 248 aa11.32□□□□□ -0.6
CUL4A-212ENST00000617546 DYNC1I2Q13409 638 aaKnown RBP11.32□□□□□ -0.6
CUL4A-212ENST00000617546 ASIC3Q9UHC3 531 aa11.32□□□□□ -0.6
CUL4A-212ENST00000617546 DENND2AQ9ULE3 1009 aa11.32□□□□□ -0.6
CUL4A-212ENST00000617546 CLIC4Q9Y696 253 aa11.32□□□□□ -0.6
CUL4A-212ENST00000617546 ATP7AQ04656 1500 aa11.32□□□□□ -0.6
CUL4A-212ENST00000617546 KDM6BO15054 1643 aa11.32□□□□□ -0.6
CUL4A-212ENST00000617546 INTS9Q9NV88 658 aaKnown RBP11.32□□□□□ -0.6
CUL4A-212ENST00000617546 TXNDC16Q9P2K2 825 aa11.32□□□□□ -0.6
CUL4A-212ENST00000617546 TRPM1Q7Z4N2 1603 aa11.32□□□□□ -0.6
CUL4A-212ENST00000617546 POLR1AO95602 1720 aaPredicted RBP11.32□□□□□ -0.6
CUL4A-212ENST00000617546 ATP10AO60312 1499 aa11.32□□□□□ -0.6
CUL4A-212ENST00000617546 LAMC1P11047 1609 aa11.32□□□□□ -0.6
CUL4A-212ENST00000617546 RPN1P04843 607 aaKnown RBP11.32□□□□□ -0.6
CUL4A-212ENST00000617546 PARP1P09874 1014 aaKnown RBP11.32□□□□□ -0.6
CUL4A-212ENST00000617546 PHBP35232 272 aa11.32□□□□□ -0.6
CUL4A-212ENST00000617546 IRX1P78414 480 aaPredicted RBP11.32□□□□□ -0.6
CUL4A-212ENST00000617546 GCKRQ14397 625 aa11.32□□□□□ -0.6
CUL4A-212ENST00000617546 CCDC105Q8IYK2 499 aa11.32□□□□□ -0.6
CUL4A-212ENST00000617546 CNKSR2Q8WXI2 1034 aa11.32□□□□□ -0.6
CUL4A-212ENST00000617546 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.32□□□□□ -0.61e-9■■■■■ 116.3
CUL4A-212ENST00000617546 THAP9Q9H5L6 903 aa11.32□□□□□ -0.6
CUL4A-212ENST00000617546 SCOCQ9UIL1 159 aa11.32□□□□□ -0.6
CUL4A-212ENST00000617546 TNRQ92752 1358 aa11.32□□□□□ -0.6
CUL4A-212ENST00000617546 MAP3K19Q56UN5 1328 aa11.32□□□□□ -0.6
CUL4A-212ENST00000617546 SAAL1Q96ER3 474 aa11.32□□□□□ -0.6
CUL4A-212ENST00000617546 TCHPQ9BT92 498 aa11.32□□□□□ -0.6
CUL4A-212ENST00000617546 PHF23Q9BUL5 403 aaPredicted RBP11.32□□□□□ -0.6
CUL4A-212ENST00000617546 TRIM6Q9C030 488 aaPredicted RBP11.32□□□□□ -0.6
CUL4A-212ENST00000617546 SH3TC1Q8TE82 1336 aa11.32□□□□□ -0.6
CUL4A-212ENST00000617546 SART1O43290 800 aaKnown RBP11.31□□□□□ -0.6
CUL4A-212ENST00000617546 SKIP12755 728 aa11.31□□□□□ -0.6
CUL4A-212ENST00000617546 IL9RQ01113 521 aa11.31□□□□□ -0.6
CUL4A-212ENST00000617546 PLCB3Q01970 1234 aa11.31□□□□□ -0.6
CUL4A-212ENST00000617546 RAB3IL1Q8TBN0 382 aa11.31□□□□□ -0.6
CUL4A-212ENST00000617546 STK38LQ9Y2H1 464 aa11.31□□□□□ -0.6
CUL4A-212ENST00000617546 CFAP73A6NFT4 308 aa11.31□□□□□ -0.6
CUL4A-212ENST00000617546 FBLN1P23142 703 aa11.31□□□□□ -0.6
CUL4A-212ENST00000617546 NT5C2P49902 561 aa11.31□□□□□ -0.6
CUL4A-212ENST00000617546 RBM5P52756 815 aaKnown RBP eCLIP11.31□□□□□ -0.62e-8■■■■■ 30
CUL4A-212ENST00000617546 GUCY2DQ02846 1103 aa11.31□□□□□ -0.6
CUL4A-212ENST00000617546 PUM3Q15397 648 aaKnown RBP11.31□□□□□ -0.6
CUL4A-212ENST00000617546 LONRF3Q496Y0 759 aa11.31□□□□□ -0.6
CUL4A-212ENST00000617546 AFAP1L2Q8N4X5 818 aa11.31□□□□□ -0.6
CUL4A-212ENST00000617546 XAGE2Q96GT9 111 aa11.31□□□□□ -0.6
CUL4A-212ENST00000617546 ANKIB1Q9P2G1 1089 aa11.31□□□□□ -0.6
CUL4A-212ENST00000617546 DIS3Q9Y2L1 958 aaKnown RBP11.31□□□□□ -0.6
CUL4A-212ENST00000617546 MRFAP1Q9Y605 127 aa11.31□□□□□ -0.6
CUL4A-212ENST00000617546 KCNK3O14649 394 aa11.31□□□□□ -0.6
CUL4A-212ENST00000617546 ZBTB17Q13105 803 aa11.31□□□□□ -0.6
CUL4A-212ENST00000617546 DCAF17Q5H9S7 520 aaPredicted RBP11.31□□□□□ -0.6
CUL4A-212ENST00000617546 CTTNBP2NLQ9P2B4 639 aa11.31□□□□□ -0.6
CUL4A-212ENST00000617546 V9GY48 417 aaPredicted RBP11.31□□□□□ -0.6
CUL4A-212ENST00000617546 CFAP74Q9C0B2 1584 aa11.31□□□□□ -0.6
CUL4A-212ENST00000617546 FOXO3O43524 673 aa11.31□□□□□ -0.6
CUL4A-212ENST00000617546 RXRAP19793 462 aa11.31□□□□□ -0.6
CUL4A-212ENST00000617546 ZBED6P86452 979 aa11.31□□□□□ -0.6
CUL4A-212ENST00000617546 BEND3Q5T5X7 828 aa11.31□□□□□ -0.6
CUL4A-212ENST00000617546 TTLL7Q6ZT98 887 aa11.31□□□□□ -0.6
CUL4A-212ENST00000617546 LRRC23Q53EV4 343 aaPredicted RBP11.31□□□□□ -0.6
CUL4A-212ENST00000617546 AKNAD1Q5T1N1 836 aa11.31□□□□□ -0.6
CUL4A-212ENST00000617546 PPP1R21Q6ZMI0 780 aa11.31□□□□□ -0.6
CUL4A-212ENST00000617546 METTL14Q9HCE5 456 aaKnown RBP11.31□□□□□ -0.6
CUL4A-212ENST00000617546 MAN1B1Q9UKM7 699 aa11.31□□□□□ -0.6
CUL4A-212ENST00000617546 MFAP3LO75121 409 aa11.3□□□□□ -0.6
CUL4A-212ENST00000617546 NECTIN1Q15223 517 aa11.3□□□□□ -0.6
CUL4A-212ENST00000617546 ZNF658Q5TYW1 1059 aaPredicted RBP11.3□□□□□ -0.6
CUL4A-212ENST00000617546 PASKQ96RG2 1323 aa11.3□□□□□ -0.6
CUL4A-212ENST00000617546 SPDYE3A6NKU9 549 aa11.3□□□□□ -0.6
CUL4A-212ENST00000617546 TADA3O75528 432 aa11.3□□□□□ -0.6
CUL4A-212ENST00000617546 EIF4A1P60842 406 aaKnown RBP11.3□□□□□ -0.6
CUL4A-212ENST00000617546 LRWD1Q9UFC0 647 aa11.3□□□□□ -0.6
CUL4A-212ENST00000617546 HEXIM1O94992 359 aaKnown RBP11.3□□□□□ -0.6
CUL4A-212ENST00000617546 NDUFA10O95299 355 aa11.3□□□□□ -0.6
CUL4A-212ENST00000617546 SLFN14P0C7P3 912 aa11.3□□□□□ -0.6
CUL4A-212ENST00000617546 HSPD1P10809 573 aaKnown RBP11.3□□□□□ -0.6
CUL4A-212ENST00000617546 ARHGEF18Q6ZSZ5 1173 aa11.3□□□□□ -0.6
CUL4A-212ENST00000617546 SYNCQ9H7C4 482 aa11.3□□□□□ -0.6
CUL4A-212ENST00000617546 EXOC7Q9UPT5 735 aa11.3□□□□□ -0.6
CUL4A-212ENST00000617546 DDAH1O94760 285 aa11.3□□□□□ -0.6
CUL4A-212ENST00000617546 LETM2Q2VYF4 491 aa11.3□□□□□ -0.6
CUL4A-212ENST00000617546 APLFQ8IW19 511 aaPredicted RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms