RNA–Protein interactions for RNA: ENST00000616887.1

PCDHGA9-202, Transcript of protocadherin gamma subfamily A, 9, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA9, Length 2,568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9-202ENST00000616887 CLCN6P51797 869 aa13.01□□□□□ -0.33
PCDHGA9-202ENST00000616887 DOK7Q18PE1 504 aa13.01□□□□□ -0.33
PCDHGA9-202ENST00000616887 C15orf52Q6ZUT6 534 aaKnown RBP13.01□□□□□ -0.33
PCDHGA9-202ENST00000616887 METTL16Q86W50 562 aaKnown RBP13.01□□□□□ -0.33
PCDHGA9-202ENST00000616887 GRAMD1CQ8IYS0 662 aa13.01□□□□□ -0.33
PCDHGA9-202ENST00000616887 TXLNBQ8N3L3 684 aa13.01□□□□□ -0.33
PCDHGA9-202ENST00000616887 PDILTQ8N807 584 aa13.01□□□□□ -0.33
PCDHGA9-202ENST00000616887 CTCFLQ8NI51 663 aaPredicted RBP13.01□□□□□ -0.33
PCDHGA9-202ENST00000616887 GPKOWQ92917 476 aaPredicted RBP eCLIP13.01□□□□□ -0.33
PCDHGA9-202ENST00000616887 MKNK2Q9HBH9 465 aa13.01□□□□□ -0.33
PCDHGA9-202ENST00000616887 ANO10Q9NW15 660 aa13.01□□□□□ -0.33
PCDHGA9-202ENST00000616887 FBXO2Q9UK22 296 aaPredicted RBP13.01□□□□□ -0.33
PCDHGA9-202ENST00000616887 STX8Q9UNK0 236 aa13.01□□□□□ -0.33
PCDHGA9-202ENST00000616887 FLT1P17948 1338 aa13□□□□□ -0.33
PCDHGA9-202ENST00000616887 BECN2A8MW95 431 aa13□□□□□ -0.33
PCDHGA9-202ENST00000616887 PRPF3O43395 683 aaKnown RBP13□□□□□ -0.33
PCDHGA9-202ENST00000616887 BBOX1O75936 387 aa13□□□□□ -0.33
PCDHGA9-202ENST00000616887 BAG3O95817 575 aa13□□□□□ -0.33
PCDHGA9-202ENST00000616887 MMP10P09238 476 aa13□□□□□ -0.33
PCDHGA9-202ENST00000616887 PCP11498 1178 aaKnown RBP13□□□□□ -0.33
PCDHGA9-202ENST00000616887 H2AFXP16104 143 aaPredicted RBP13□□□□□ -0.33
PCDHGA9-202ENST00000616887 MUM1L1Q5H9M0 696 aa13□□□□□ -0.33
PCDHGA9-202ENST00000616887 FOXP4Q8IVH2 680 aaPredicted RBP13□□□□□ -0.33
PCDHGA9-202ENST00000616887 TEX11Q8IYF3 940 aa13□□□□□ -0.33
PCDHGA9-202ENST00000616887 KRI1Q8N9T8 703 aaKnown RBP13□□□□□ -0.33
PCDHGA9-202ENST00000616887 EIF4ENIF1Q9NRA8 985 aaKnown RBP13□□□□□ -0.33
PCDHGA9-202ENST00000616887 RNF216Q9NWF9 866 aaPredicted RBP13□□□□□ -0.33
PCDHGA9-202ENST00000616887 GOLGA8HP0CJ92 632 aa13□□□□□ -0.33
PCDHGA9-202ENST00000616887 CASQ1P31415 396 aa13□□□□□ -0.33
PCDHGA9-202ENST00000616887 PSEN1P49768 467 aa13□□□□□ -0.33
PCDHGA9-202ENST00000616887 RHBDL3P58872 404 aa13□□□□□ -0.33
PCDHGA9-202ENST00000616887 PICALMQ13492 652 aa13□□□□□ -0.33
PCDHGA9-202ENST00000616887 NYAP1Q6ZVC0 841 aa13□□□□□ -0.33
PCDHGA9-202ENST00000616887 CEP57L1Q8IYX8 460 aa13□□□□□ -0.33
PCDHGA9-202ENST00000616887 CERS5Q8N5B7 392 aa13□□□□□ -0.33
PCDHGA9-202ENST00000616887 PNMA1Q8ND90 353 aa13□□□□□ -0.33
PCDHGA9-202ENST00000616887 SMARCE1Q969G3 411 aa13□□□□□ -0.33
PCDHGA9-202ENST00000616887 KCNH3Q9ULD8 1083 aa13□□□□□ -0.33
PCDHGA9-202ENST00000616887 TSPY3P0CV98 308 aa12.99□□□□□ -0.33
PCDHGA9-202ENST00000616887 TSPY8P0CW00 308 aa12.99□□□□□ -0.33
PCDHGA9-202ENST00000616887 SRGNP10124 158 aa12.99□□□□□ -0.33
PCDHGA9-202ENST00000616887 RASA1P20936 1047 aa12.99□□□□□ -0.33
PCDHGA9-202ENST00000616887 PPP4CP60510 307 aa12.99□□□□□ -0.33
PCDHGA9-202ENST00000616887 RILPL1Q5EBL4 403 aa12.99□□□□□ -0.33
PCDHGA9-202ENST00000616887 ICE2Q659A1 982 aa12.99□□□□□ -0.33
PCDHGA9-202ENST00000616887 TYW1BQ6NUM6 668 aa12.99□□□□□ -0.33
PCDHGA9-202ENST00000616887 TMC4Q7Z404 712 aa12.99□□□□□ -0.33
PCDHGA9-202ENST00000616887 JMYQ8N9B5 988 aa12.99□□□□□ -0.33
PCDHGA9-202ENST00000616887 RASGRP4Q8TDF6 673 aa12.99□□□□□ -0.33
PCDHGA9-202ENST00000616887 KCNQ5Q9NR82 932 aa12.99□□□□□ -0.33
PCDHGA9-202ENST00000616887 RBM28Q9NW13 759 aaKnown RBP12.99□□□□□ -0.33
PCDHGA9-202ENST00000616887 ZNF219Q9P2Y4 722 aaPredicted RBP12.99□□□□□ -0.33
PCDHGA9-202ENST00000616887 KLRG2A4D1S0 409 aaPredicted RBP12.99□□□□□ -0.33
PCDHGA9-202ENST00000616887 CUTAO60888 179 aa12.99□□□□□ -0.33
PCDHGA9-202ENST00000616887 PRR29P0C7W0 189 aa12.99□□□□□ -0.33
PCDHGA9-202ENST00000616887 KRT2P35908 639 aa12.99□□□□□ -0.33
PCDHGA9-202ENST00000616887 GSTO1P78417 241 aa12.99□□□□□ -0.33
PCDHGA9-202ENST00000616887 ZSCAN26Q16670 478 aa12.99□□□□□ -0.33
PCDHGA9-202ENST00000616887 CLEC10AQ8IUN9 316 aa12.99□□□□□ -0.33
PCDHGA9-202ENST00000616887 LRRC8AQ8IWT6 810 aa12.99□□□□□ -0.33
PCDHGA9-202ENST00000616887 LRRN4CLQ8ND94 238 aa12.99□□□□□ -0.33
PCDHGA9-202ENST00000616887 CRAMP1Q96RY5 1269 aa12.99□□□□□ -0.33
PCDHGA9-202ENST00000616887 CSRNP2Q9H175 543 aa12.99□□□□□ -0.33
PCDHGA9-202ENST00000616887 KAT14Q9H8E8 782 aa12.99□□□□□ -0.33
PCDHGA9-202ENST00000616887 ANKRD31Q8N7Z5 1873 aa12.99□□□□□ -0.33
PCDHGA9-202ENST00000616887 SNED1Q8TER0 1413 aa12.99□□□□□ -0.33
PCDHGA9-202ENST00000616887 MYH6P13533 1939 aa12.98□□□□□ -0.33
PCDHGA9-202ENST00000616887 GPR75-ASB3A0A0A6YYF3 556 aa12.98□□□□□ -0.33
PCDHGA9-202ENST00000616887 ZBTB7AO95365 584 aa12.98□□□□□ -0.33
PCDHGA9-202ENST00000616887 PTPREP23469 700 aa12.98□□□□□ -0.33
PCDHGA9-202ENST00000616887 SCNN1DP51172 638 aa12.98□□□□□ -0.33
PCDHGA9-202ENST00000616887 ZCCHC17Q9NP64 241 aaKnown RBP12.98□□□□□ -0.33
PCDHGA9-202ENST00000616887 FAM205AQ6ZU69 1335 aa12.98□□□□□ -0.33
PCDHGA9-202ENST00000616887 DLEC1Q9Y238 1755 aa12.98□□□□□ -0.33
PCDHGA9-202ENST00000616887 A0A087X0B3 334 aa12.98□□□□□ -0.33
PCDHGA9-202ENST00000616887 POLR2DO15514 142 aaKnown RBP12.98□□□□□ -0.33
PCDHGA9-202ENST00000616887 CYTH3O43739 400 aa12.98□□□□□ -0.33
PCDHGA9-202ENST00000616887 CALM1P0DP23 149 aa12.98□□□□□ -0.33
PCDHGA9-202ENST00000616887 CALM2P0DP24 149 aa12.98□□□□□ -0.33
PCDHGA9-202ENST00000616887 CALM3P0DP25 149 aa12.98□□□□□ -0.33
PCDHGA9-202ENST00000616887 SKILP12757 684 aa12.98□□□□□ -0.33
PCDHGA9-202ENST00000616887 ZNF174Q15697 407 aa12.98□□□□□ -0.33
PCDHGA9-202ENST00000616887 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.98□□□□□ -0.33
PCDHGA9-202ENST00000616887 CNNM3Q8NE01 707 aa12.98□□□□□ -0.33
PCDHGA9-202ENST00000616887 TNFRSF25Q93038 417 aa12.98□□□□□ -0.33
PCDHGA9-202ENST00000616887 DAGLAQ9Y4D2 1042 aa12.98□□□□□ -0.33
PCDHGA9-202ENST00000616887 PCDHAC2Q9Y5I4 1007 aa12.98□□□□□ -0.33
PCDHGA9-202ENST00000616887 PARP3Q9Y6F1 533 aa12.98□□□□□ -0.33
PCDHGA9-202ENST00000616887 NRXN2Q9P2S2 1712 aa12.98□□□□□ -0.33
PCDHGA9-202ENST00000616887 ROBO3Q96MS0 1386 aa12.98□□□□□ -0.33
PCDHGA9-202ENST00000616887 SCG2P13521 617 aa12.97□□□□□ -0.33
PCDHGA9-202ENST00000616887 BMP6P22004 513 aa12.97□□□□□ -0.33
PCDHGA9-202ENST00000616887 TPM4P67936 248 aa12.97□□□□□ -0.33
PCDHGA9-202ENST00000616887 PTPN21Q16825 1174 aa12.97□□□□□ -0.33
PCDHGA9-202ENST00000616887 PIK3AP1Q6ZUJ8 805 aa12.97□□□□□ -0.33
PCDHGA9-202ENST00000616887 ZNF444Q8N0Y2 327 aaPredicted RBP12.97□□□□□ -0.33
PCDHGA9-202ENST00000616887 SLC16A10Q8TF71 515 aa12.97□□□□□ -0.33
PCDHGA9-202ENST00000616887 EPSTI1Q96J88 318 aa12.97□□□□□ -0.33
PCDHGA9-202ENST00000616887 ATP6V0A2Q9Y487 856 aa12.97□□□□□ -0.33
PCDHGA9-202ENST00000616887 MYCNP04198 464 aaPredicted RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms