RNA–Protein interactions for RNA: ENST00000616390.1

CACNA1C-231, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2 BASIC

Gene CACNA1C, Length 2,833 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-231ENST00000616390 ERCC6LQ2NKX8 1250 aa15.76■□□□□ 0.11
CACNA1C-231ENST00000616390 TRAPPC3LQ5T215 181 aa15.76■□□□□ 0.11
CACNA1C-231ENST00000616390 ZNF444Q8N0Y2 327 aaPredicted RBP15.76■□□□□ 0.11
CACNA1C-231ENST00000616390 TNFRSF25Q93038 417 aa15.76■□□□□ 0.11
CACNA1C-231ENST00000616390 FERMT2Q96AC1 680 aa15.76■□□□□ 0.11
CACNA1C-231ENST00000616390 CTNND2Q9UQB3 1225 aa15.76■□□□□ 0.11
CACNA1C-231ENST00000616390 SYNRGQ9UMZ2 1314 aa15.75■□□□□ 0.11
CACNA1C-231ENST00000616390 ZNF18P17022 549 aa15.75■□□□□ 0.11
CACNA1C-231ENST00000616390 CCT6AP40227 531 aaKnown RBP15.75■□□□□ 0.11
CACNA1C-231ENST00000616390 PFKFB3Q16875 520 aaPredicted RBP15.75■□□□□ 0.11
CACNA1C-231ENST00000616390 TOGARAM2Q6ZUX3 1019 aa15.75■□□□□ 0.11
CACNA1C-231ENST00000616390 HEATR3Q7Z4Q2 680 aa15.75■□□□□ 0.11
CACNA1C-231ENST00000616390 FAM205AQ6ZU69 1335 aa15.75■□□□□ 0.11
CACNA1C-231ENST00000616390 TOM1O60784 492 aa15.75■□□□□ 0.11
CACNA1C-231ENST00000616390 KIF20AO95235 890 aa15.75■□□□□ 0.11
CACNA1C-231ENST00000616390 PCP11498 1178 aaKnown RBP15.75■□□□□ 0.11
CACNA1C-231ENST00000616390 KIF5BP33176 963 aa15.75■□□□□ 0.11
CACNA1C-231ENST00000616390 CUL4BQ13620 913 aa15.75■□□□□ 0.11
CACNA1C-231ENST00000616390 RRAGBQ5VZM2 374 aa15.75■□□□□ 0.11
CACNA1C-231ENST00000616390 SPTY2D1Q68D10 685 aaPredicted RBP15.75■□□□□ 0.11
CACNA1C-231ENST00000616390 EGFL6Q8IUX8 553 aa15.75■□□□□ 0.11
CACNA1C-231ENST00000616390 VAT1LQ9HCJ6 419 aa15.75■□□□□ 0.11
CACNA1C-231ENST00000616390 USP21Q9UK80 565 aa15.75■□□□□ 0.11
CACNA1C-231ENST00000616390 KIF2AO00139 706 aaPredicted RBP15.74■□□□□ 0.11
CACNA1C-231ENST00000616390 MTF1Q14872 753 aa15.74■□□□□ 0.11
CACNA1C-231ENST00000616390 C12orf60Q5U649 245 aa15.74■□□□□ 0.11
CACNA1C-231ENST00000616390 TC2NQ8N9U0 490 aa15.74■□□□□ 0.11
CACNA1C-231ENST00000616390 CNBD1Q8NA66 436 aa15.74■□□□□ 0.11
CACNA1C-231ENST00000616390 NOL10Q9BSC4 688 aaKnown RBP15.74■□□□□ 0.11
CACNA1C-231ENST00000616390 PP2D1A8MPX8 630 aa15.74■□□□□ 0.11
CACNA1C-231ENST00000616390 ETF1P62495 437 aaKnown RBP15.74■□□□□ 0.11
CACNA1C-231ENST00000616390 ATP2C1P98194 919 aaPredicted RBP15.74■□□□□ 0.11
CACNA1C-231ENST00000616390 DPYDQ12882 1025 aa15.74■□□□□ 0.11
CACNA1C-231ENST00000616390 KARSQ15046 597 aaKnown RBP15.74■□□□□ 0.11
CACNA1C-231ENST00000616390 TYW1BQ6NUM6 668 aa15.74■□□□□ 0.11
CACNA1C-231ENST00000616390 BLIDQ8IZY5 108 aa15.74■□□□□ 0.11
CACNA1C-231ENST00000616390 TRIML1Q8N9V2 468 aa15.74■□□□□ 0.11
CACNA1C-231ENST00000616390 PPP2R2CQ9Y2T4 447 aa15.74■□□□□ 0.11
CACNA1C-231ENST00000616390 UBAP1LF5GYI3 381 aa15.73■□□□□ 0.11
CACNA1C-231ENST00000616390 VPS72Q15906 364 aa15.73■□□□□ 0.11
CACNA1C-231ENST00000616390 ELOA2Q8IYF1 753 aaPredicted RBP15.73■□□□□ 0.11
CACNA1C-231ENST00000616390 ERO1AQ96HE7 468 aa15.73■□□□□ 0.11
CACNA1C-231ENST00000616390 CGNQ9P2M7 1197 aaKnown RBP15.73■□□□□ 0.11
CACNA1C-231ENST00000616390 XDHP47989 1333 aa15.73■□□□□ 0.11
CACNA1C-231ENST00000616390 INF2Q27J81 1249 aa15.73■□□□□ 0.11
CACNA1C-231ENST00000616390 KMT5BQ4FZB7 885 aa15.73■□□□□ 0.11
CACNA1C-231ENST00000616390 RC3H1Q5TC82 1133 aaKnown RBP15.73■□□□□ 0.11
CACNA1C-231ENST00000616390 TMEM139Q8IV31 216 aa15.73■□□□□ 0.11
CACNA1C-231ENST00000616390 REXO1L1PQ8IX06 675 aa15.73■□□□□ 0.11
CACNA1C-231ENST00000616390 AMOTL1Q8IY63 956 aa15.73■□□□□ 0.11
CACNA1C-231ENST00000616390 IQUBQ8NA54 791 aa15.73■□□□□ 0.11
CACNA1C-231ENST00000616390 SPATA20Q8TB22 786 aa15.73■□□□□ 0.11
CACNA1C-231ENST00000616390 CCDC194A0A1B0GVG4 234 aa15.72■□□□□ 0.11
CACNA1C-231ENST00000616390 UFL1O94874 794 aa15.72■□□□□ 0.11
CACNA1C-231ENST00000616390 SBK1Q52WX2 424 aa15.72■□□□□ 0.11
CACNA1C-231ENST00000616390 RPGRQ92834 1020 aaKnown RBP15.72■□□□□ 0.11
CACNA1C-231ENST00000616390 VPS16Q9H269 839 aa15.72■□□□□ 0.11
CACNA1C-231ENST00000616390 KCND1Q9NSA2 647 aa15.72■□□□□ 0.11
CACNA1C-231ENST00000616390 SH3BP1Q9Y3L3 701 aa15.72■□□□□ 0.11
CACNA1C-231ENST00000616390 FANCGO15287 622 aa15.72■□□□□ 0.11
CACNA1C-231ENST00000616390 BAG3O95817 575 aa15.72■□□□□ 0.11
CACNA1C-231ENST00000616390 GNG11P61952 73 aa15.72■□□□□ 0.11
CACNA1C-231ENST00000616390 GRAPQ13588 217 aa15.72■□□□□ 0.11
CACNA1C-231ENST00000616390 NR1I3Q14994 352 aa15.72■□□□□ 0.11
CACNA1C-231ENST00000616390 TAF3Q5VWG9 929 aa15.72■□□□□ 0.11
CACNA1C-231ENST00000616390 SPATA1Q5VX52 437 aa15.72■□□□□ 0.11
CACNA1C-231ENST00000616390 IGSF22Q8N9C0 903 aa15.72■□□□□ 0.11
CACNA1C-231ENST00000616390 WDR66Q8TBY9 1149 aa15.72■□□□□ 0.11
CACNA1C-231ENST00000616390 GRAPLQ8TC17 118 aaPredicted RBP15.72■□□□□ 0.11
CACNA1C-231ENST00000616390 EEF2KMTQ96G04 330 aa15.72■□□□□ 0.11
CACNA1C-231ENST00000616390 SOWAHDA6NJG2 315 aa15.72■□□□□ 0.11
CACNA1C-231ENST00000616390 PPP1R3GB7ZBB8 358 aa15.72■□□□□ 0.11
CACNA1C-231ENST00000616390 PES1O00541 588 aaKnown RBP15.72■□□□□ 0.11
CACNA1C-231ENST00000616390 ARHGAP6O43182 974 aa15.72■□□□□ 0.11
CACNA1C-231ENST00000616390 BMP15O95972 392 aa15.72■□□□□ 0.11
CACNA1C-231ENST00000616390 ERCC5P28715 1186 aaPredicted RBP15.72■□□□□ 0.11
CACNA1C-231ENST00000616390 GPSM2P81274 684 aa15.72■□□□□ 0.11
CACNA1C-231ENST00000616390 RBL2Q08999 1139 aa15.72■□□□□ 0.11
CACNA1C-231ENST00000616390 TBX2Q13207 712 aaPredicted RBP15.72■□□□□ 0.11
CACNA1C-231ENST00000616390 FBXO38Q6PIJ6 1188 aa15.72■□□□□ 0.11
CACNA1C-231ENST00000616390 TRIM65Q6PJ69 517 aa15.72■□□□□ 0.11
CACNA1C-231ENST00000616390 MTRQ99707 1265 aa15.72■□□□□ 0.11
CACNA1C-231ENST00000616390 BTAF1O14981 1849 aa15.71■□□□□ 0.11
CACNA1C-231ENST00000616390 ZSCAN12O43309 604 aa15.71■□□□□ 0.11
CACNA1C-231ENST00000616390 DHX8Q14562 1220 aaKnown RBP15.71■□□□□ 0.11
CACNA1C-231ENST00000616390 ZNF804AQ7Z570 1209 aa15.71■□□□□ 0.11
CACNA1C-231ENST00000616390 SH3RF1Q7Z6J0 888 aa15.71■□□□□ 0.11
CACNA1C-231ENST00000616390 PPFIBP1Q86W92 1011 aa15.71■□□□□ 0.11
CACNA1C-231ENST00000616390 IRX2Q9BZI1 471 aaPredicted RBP15.71■□□□□ 0.11
CACNA1C-231ENST00000616390 LZTFL1Q9NQ48 299 aa15.71■□□□□ 0.11
CACNA1C-231ENST00000616390 MAD2L2Q9UI95 211 aa15.71■□□□□ 0.11
CACNA1C-231ENST00000616390 GDAQ9Y2T3 454 aa15.71■□□□□ 0.11
CACNA1C-231ENST00000616390 MYH8P13535 1937 aa15.71■□□□□ 0.11
CACNA1C-231ENST00000616390 CYTH3O43739 400 aa15.71■□□□□ 0.1
CACNA1C-231ENST00000616390 STAT6P42226 847 aa15.71■□□□□ 0.1
CACNA1C-231ENST00000616390 BTDP43251 543 aa15.71■□□□□ 0.1
CACNA1C-231ENST00000616390 SYCP1Q15431 976 aa15.71■□□□□ 0.1
CACNA1C-231ENST00000616390 GSDMAQ96QA5 445 aa15.71■□□□□ 0.1
CACNA1C-231ENST00000616390 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.71■□□□□ 0.1
CACNA1C-231ENST00000616390 A0A0U1RQJ8 604 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms