RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 SV2BQ7L1I2 683 aa6.32□□□□□ -1.4
SYNCRIP-204ENST00000616122 DYMQ7RTS9 669 aa6.32□□□□□ -1.4
SYNCRIP-204ENST00000616122 FBXL16Q8N461 479 aa6.32□□□□□ -1.4
SYNCRIP-204ENST00000616122 PPP1R13BQ96KQ4 1090 aa6.32□□□□□ -1.4
SYNCRIP-204ENST00000616122 IRX2Q9BZI1 471 aaPredicted RBP6.32□□□□□ -1.4
SYNCRIP-204ENST00000616122 FAM207AQ9NSI2 230 aaPredicted RBP6.32□□□□□ -1.4
SYNCRIP-204ENST00000616122 MAN1B1Q9UKM7 699 aa6.32□□□□□ -1.4
SYNCRIP-204ENST00000616122 FGFR2P21802 821 aa6.32□□□□□ -1.4
SYNCRIP-204ENST00000616122 ST5P78524 1137 aa6.32□□□□□ -1.4
SYNCRIP-204ENST00000616122 ARID5AQ03989 594 aa6.32□□□□□ -1.4
SYNCRIP-204ENST00000616122 CT47A1Q5JQC4 288 aaPredicted RBP6.32□□□□□ -1.4
SYNCRIP-204ENST00000616122 ANKRD13CQ8N6S4 541 aa6.32□□□□□ -1.4
SYNCRIP-204ENST00000616122 CTNND2Q9UQB3 1225 aa6.32□□□□□ -1.4
SYNCRIP-204ENST00000616122 GDAQ9Y2T3 454 aa6.32□□□□□ -1.4
SYNCRIP-204ENST00000616122 PPP1R2P41236 205 aa6.32□□□□□ -1.4
SYNCRIP-204ENST00000616122 DNM2P50570 870 aa6.32□□□□□ -1.4
SYNCRIP-204ENST00000616122 TUBB4BP68371 445 aa6.32□□□□□ -1.4
SYNCRIP-204ENST00000616122 ITPK1Q13572 414 aa6.32□□□□□ -1.4
SYNCRIP-204ENST00000616122 SYCP1Q15431 976 aa6.32□□□□□ -1.4
SYNCRIP-204ENST00000616122 CERS3Q8IU89 383 aa6.32□□□□□ -1.4
SYNCRIP-204ENST00000616122 NELFBQ8WX92 580 aa6.32□□□□□ -1.4
SYNCRIP-204ENST00000616122 LZTS2Q9BRK4 669 aa6.32□□□□□ -1.4
SYNCRIP-204ENST00000616122 CWC15Q9P013 229 aaKnown RBP6.32□□□□□ -1.4
SYNCRIP-204ENST00000616122 TMEM232C9JQI7 657 aa6.32□□□□□ -1.4
SYNCRIP-204ENST00000616122 TEX33O43247 280 aa6.32□□□□□ -1.4
SYNCRIP-204ENST00000616122 NMT2O60551 498 aa6.32□□□□□ -1.4
SYNCRIP-204ENST00000616122 COBLO75128 1261 aa6.32□□□□□ -1.4
SYNCRIP-204ENST00000616122 NEK8Q86SG6 692 aa6.32□□□□□ -1.4
SYNCRIP-204ENST00000616122 OR52Z1P0C646 297 aa6.31□□□□□ -1.4
SYNCRIP-204ENST00000616122 LONP1P36776 959 aaKnown RBP6.31□□□□□ -1.4
SYNCRIP-204ENST00000616122 NOP2P46087 812 aaKnown RBP6.31□□□□□ -1.4
SYNCRIP-204ENST00000616122 NCAPHQ15003 741 aa6.31□□□□□ -1.4
SYNCRIP-204ENST00000616122 FAM217BQ9NTX9 383 aaPredicted RBP6.31□□□□□ -1.4
SYNCRIP-204ENST00000616122 SERPINB13Q9UIV8 391 aa6.31□□□□□ -1.4
SYNCRIP-204ENST00000616122 CDC23Q9UJX2 597 aa6.31□□□□□ -1.4
SYNCRIP-204ENST00000616122 LEMD3Q9Y2U8 911 aa6.31□□□□□ -1.4
SYNCRIP-204ENST00000616122 COL15A1P39059 1388 aa6.31□□□□□ -1.4
SYNCRIP-204ENST00000616122 OVOS2A0A0G2JMS6 1433 aa6.31□□□□□ -1.4
SYNCRIP-204ENST00000616122 EFCAB8A8MWE9 144 aa6.31□□□□□ -1.4
SYNCRIP-204ENST00000616122 TRIM14Q14142 442 aa6.31□□□□□ -1.4
SYNCRIP-204ENST00000616122 ARL6IP4Q66PJ3 421 aaKnown RBP6.31□□□□□ -1.4
SYNCRIP-204ENST00000616122 ILDR1Q86SU0 546 aaPredicted RBP6.31□□□□□ -1.4
SYNCRIP-204ENST00000616122 ERMNQ8TAM6 284 aa6.31□□□□□ -1.4
SYNCRIP-204ENST00000616122 NAPGQ99747 312 aaPredicted RBP6.31□□□□□ -1.4
SYNCRIP-204ENST00000616122 HPSEQ9Y251 543 aa6.31□□□□□ -1.4
SYNCRIP-204ENST00000616122 SHPRHQ149N8 1683 aa6.31□□□□□ -1.4
SYNCRIP-204ENST00000616122 USP17L3A6NCW0 530 aa6.31□□□□□ -1.4
SYNCRIP-204ENST00000616122 USP17L4A6NCW7 530 aa6.31□□□□□ -1.4
SYNCRIP-204ENST00000616122 NTSR2O95665 410 aa6.31□□□□□ -1.4
SYNCRIP-204ENST00000616122 USP17L1Q7RTZ2 530 aa6.31□□□□□ -1.4
SYNCRIP-204ENST00000616122 CABP7Q86V35 215 aa6.31□□□□□ -1.4
SYNCRIP-204ENST00000616122 RABGGTAQ92696 567 aa6.31□□□□□ -1.4
SYNCRIP-204ENST00000616122 NSUN4Q96CB9 384 aaKnown RBP6.31□□□□□ -1.4
SYNCRIP-204ENST00000616122 ALS2CR12Q96Q35 445 aa6.31□□□□□ -1.4
SYNCRIP-204ENST00000616122 NLRC4Q9NPP4 1024 aa6.31□□□□□ -1.4
SYNCRIP-204ENST00000616122 CALCOCO1Q9P1Z2 691 aa6.31□□□□□ -1.4
SYNCRIP-204ENST00000616122 SLIT1O75093 1534 aa6.31□□□□□ -1.4
SYNCRIP-204ENST00000616122 COPB1P53618 953 aaKnown RBP6.31□□□□□ -1.4
SYNCRIP-204ENST00000616122 USP17L2Q6R6M4 530 aa6.31□□□□□ -1.4
SYNCRIP-204ENST00000616122 NAA15Q9BXJ9 866 aaKnown RBP6.31□□□□□ -1.4
SYNCRIP-204ENST00000616122 CENPHQ9H3R5 247 aa6.31□□□□□ -1.4
SYNCRIP-204ENST00000616122 RP1L1Q8IWN7 2480 aaPredicted RBP6.31□□□□□ -1.4
SYNCRIP-204ENST00000616122 MACROD2A1Z1Q3 448 aa6.31□□□□□ -1.4
SYNCRIP-204ENST00000616122 CCDC151A5D8V7 595 aa6.31□□□□□ -1.4
SYNCRIP-204ENST00000616122 SPDYE3A6NKU9 549 aa6.31□□□□□ -1.4
SYNCRIP-204ENST00000616122 KCNJ18B7U540 433 aa6.31□□□□□ -1.4
SYNCRIP-204ENST00000616122 KCNJ6P48051 423 aa6.31□□□□□ -1.4
SYNCRIP-204ENST00000616122 KCNJ12Q14500 433 aa6.31□□□□□ -1.4
SYNCRIP-204ENST00000616122 CETN3O15182 167 aa6.3□□□□□ -1.4
SYNCRIP-204ENST00000616122 TBCAO75347 108 aaKnown RBP6.3□□□□□ -1.4
SYNCRIP-204ENST00000616122 BTDP43251 543 aa6.3□□□□□ -1.4
SYNCRIP-204ENST00000616122 CYP27A1Q02318 531 aa6.3□□□□□ -1.4
SYNCRIP-204ENST00000616122 RAD51AP2Q09MP3 1159 aa6.3□□□□□ -1.4
SYNCRIP-204ENST00000616122 HLTFQ14527 1009 aaKnown RBP eCLIP6.3□□□□□ -1.4
SYNCRIP-204ENST00000616122 CYP26C1Q6V0L0 522 aa6.3□□□□□ -1.4
SYNCRIP-204ENST00000616122 HS2ST1Q7LGA3 356 aa6.3□□□□□ -1.4
SYNCRIP-204ENST00000616122 CAPZA3Q96KX2 299 aa6.3□□□□□ -1.4
SYNCRIP-204ENST00000616122 TMEM47Q9BQJ4 181 aa6.3□□□□□ -1.4
SYNCRIP-204ENST00000616122 TUBGCP2Q9BSJ2 902 aa6.3□□□□□ -1.4
SYNCRIP-204ENST00000616122 FBXO2Q9UK22 296 aaPredicted RBP6.3□□□□□ -1.4
SYNCRIP-204ENST00000616122 XDHP47989 1333 aa6.3□□□□□ -1.4
SYNCRIP-204ENST00000616122 SALL1Q9NSC2 1324 aa6.3□□□□□ -1.4
SYNCRIP-204ENST00000616122 MAP2P11137 1827 aaKnown RBP6.3□□□□□ -1.4
SYNCRIP-204ENST00000616122 RAPGEF1Q13905 1077 aa6.3□□□□□ -1.4
SYNCRIP-204ENST00000616122 FAM26FQ5R3K3 315 aa6.3□□□□□ -1.4
SYNCRIP-204ENST00000616122 GALNT17Q6IS24 598 aa6.3□□□□□ -1.4
SYNCRIP-204ENST00000616122 PAGE5Q96GU1 130 aa6.3□□□□□ -1.4
SYNCRIP-204ENST00000616122 UIMC1Q96RL1 719 aa6.3□□□□□ -1.4
SYNCRIP-204ENST00000616122 BPIFA3Q9BQP9 254 aa6.3□□□□□ -1.4
SYNCRIP-204ENST00000616122 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.3□□□□□ -1.4
SYNCRIP-204ENST00000616122 MST1RQ04912 1400 aa6.3□□□□□ -1.4
SYNCRIP-204ENST00000616122 CLTCQ00610 1675 aaKnown RBP6.3□□□□□ -1.4
SYNCRIP-204ENST00000616122 BBOX1O75936 387 aa6.3□□□□□ -1.4
SYNCRIP-204ENST00000616122 CNNM4Q6P4Q7 775 aa6.3□□□□□ -1.4
SYNCRIP-204ENST00000616122 CTR9Q6PD62 1173 aa6.3□□□□□ -1.4
SYNCRIP-204ENST00000616122 KIAA0825Q8IV33 1275 aa6.3□□□□□ -1.4
SYNCRIP-204ENST00000616122 DHX40Q8IX18 779 aaKnown RBP6.3□□□□□ -1.4
SYNCRIP-204ENST00000616122 OGFOD1Q8N543 542 aa6.3□□□□□ -1.4
SYNCRIP-204ENST00000616122 GPR161Q8N6U8 529 aaKnown RBP6.3□□□□□ -1.4
SYNCRIP-204ENST00000616122 PSMB7Q99436 277 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms