RNA–Protein interactions for RNA: ENST00000616074.4

TRAPPC3-208, Transcript of trafficking protein particle complex 3, humanhuman

TSL 5 BASIC

Gene TRAPPC3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-208ENST00000616074 UBE2OQ9C0C9 1292 aaKnown RBP24.92■■□□□ 1.58
TRAPPC3-208ENST00000616074 ADAMTS5Q9UNA0 930 aa24.92■■□□□ 1.58
TRAPPC3-208ENST00000616074 PLXNA1Q9UIW2 1896 aa24.92■■□□□ 1.58
TRAPPC3-208ENST00000616074 GSG1L2A8MUP6 293 aa24.91■■□□□ 1.58
TRAPPC3-208ENST00000616074 SBK1Q52WX2 424 aa24.91■■□□□ 1.58
TRAPPC3-208ENST00000616074 ANO1Q5XXA6 986 aa24.91■■□□□ 1.58
TRAPPC3-208ENST00000616074 OSBP2Q969R2 916 aa24.91■■□□□ 1.58
TRAPPC3-208ENST00000616074 GOPCQ9HD26 462 aa24.91■■□□□ 1.58
TRAPPC3-208ENST00000616074 SLC5A4Q9NY91 659 aa24.91■■□□□ 1.58
TRAPPC3-208ENST00000616074 RAD21O60216 631 aa24.9■■□□□ 1.58
TRAPPC3-208ENST00000616074 SLC25A27O95847 323 aa24.9■■□□□ 1.58
TRAPPC3-208ENST00000616074 FCER1AP12319 257 aa24.9■■□□□ 1.58
TRAPPC3-208ENST00000616074 RASA1P20936 1047 aa24.9■■□□□ 1.58
TRAPPC3-208ENST00000616074 ATN1P54259 1190 aaPredicted RBP24.9■■□□□ 1.58
TRAPPC3-208ENST00000616074 MDM2Q00987 491 aaPredicted RBP24.9■■□□□ 1.58
TRAPPC3-208ENST00000616074 LRIT3Q3SXY7 679 aa24.9■■□□□ 1.58
TRAPPC3-208ENST00000616074 FAM83BQ5T0W9 1011 aa24.9■■□□□ 1.58
TRAPPC3-208ENST00000616074 GJC2Q5T442 439 aaPredicted RBP24.9■■□□□ 1.58
TRAPPC3-208ENST00000616074 STK11IPQ8N1F8 1099 aa24.9■■□□□ 1.58
TRAPPC3-208ENST00000616074 APPBP2Q92624 585 aa24.9■■□□□ 1.58
TRAPPC3-208ENST00000616074 GPATCH3Q96I76 525 aa24.9■■□□□ 1.58
TRAPPC3-208ENST00000616074 MAML3Q96JK9 1138 aa24.9■■□□□ 1.58
TRAPPC3-208ENST00000616074 PPP1R9AQ9ULJ8 1098 aa24.9■■□□□ 1.58
TRAPPC3-208ENST00000616074 ROBO3Q96MS0 1386 aa24.9■■□□□ 1.58
TRAPPC3-208ENST00000616074 MYH4Q9Y623 1939 aa24.89■■□□□ 1.58
TRAPPC3-208ENST00000616074 SEPT4O43236 478 aa24.89■■□□□ 1.58
TRAPPC3-208ENST00000616074 PRAMEF19Q5SWL8 479 aa24.89■■□□□ 1.58
TRAPPC3-208ENST00000616074 MINDY4BA8MYZ0 360 aa24.88■■□□□ 1.57
TRAPPC3-208ENST00000616074 VWA5AO00534 786 aa24.88■■□□□ 1.57
TRAPPC3-208ENST00000616074 RNF113AO15541 343 aaKnown RBP24.88■■□□□ 1.57
TRAPPC3-208ENST00000616074 GIMAP6Q6P9H5 292 aa24.88■■□□□ 1.57
TRAPPC3-208ENST00000616074 RIOX2Q8IUF8 465 aa24.88■■□□□ 1.57
TRAPPC3-208ENST00000616074 EPB41L4AQ9HCS5 686 aaPredicted RBP24.88■■□□□ 1.57
TRAPPC3-208ENST00000616074 LTBP2Q14767 1821 aa24.87■■□□□ 1.57
TRAPPC3-208ENST00000616074 GPAA1O43292 621 aa24.87■■□□□ 1.57
TRAPPC3-208ENST00000616074 ARRDC4Q8NCT1 418 aa24.87■■□□□ 1.57
TRAPPC3-208ENST00000616074 REPS2Q8NFH8 660 aa24.87■■□□□ 1.57
TRAPPC3-208ENST00000616074 MMP19Q99542 508 aa24.87■■□□□ 1.57
TRAPPC3-208ENST00000616074 MKNK2Q9HBH9 465 aa24.87■■□□□ 1.57
TRAPPC3-208ENST00000616074 ZNF214Q9UL59 606 aaPredicted RBP24.87■■□□□ 1.57
TRAPPC3-208ENST00000616074 LAMA2P24043 3122 aaKnown RBP24.86■■□□□ 1.57
TRAPPC3-208ENST00000616074 M0R2C6 588 aa24.86■■□□□ 1.57
TRAPPC3-208ENST00000616074 PGK2P07205 417 aa24.86■■□□□ 1.57
TRAPPC3-208ENST00000616074 STAT3P40763 770 aa24.86■■□□□ 1.57
TRAPPC3-208ENST00000616074 RTP1P59025 263 aa24.86■■□□□ 1.57
TRAPPC3-208ENST00000616074 GPR153Q6NV75 609 aa24.86■■□□□ 1.57
TRAPPC3-208ENST00000616074 NUP88Q99567 741 aaPredicted RBP24.86■■□□□ 1.57
TRAPPC3-208ENST00000616074 SMCHD1A6NHR9 2005 aa24.86■■□□□ 1.57
TRAPPC3-208ENST00000616074 KBTBD13C9JR72 458 aa24.85■■□□□ 1.57
TRAPPC3-208ENST00000616074 ZFYP08048 801 aaPredicted RBP24.85■■□□□ 1.57
TRAPPC3-208ENST00000616074 NYAP2Q9P242 653 aa24.85■■□□□ 1.57
TRAPPC3-208ENST00000616074 MYCNP04198 464 aaPredicted RBP24.84■■□□□ 1.57
TRAPPC3-208ENST00000616074 TDO2P48775 406 aa24.84■■□□□ 1.57
TRAPPC3-208ENST00000616074 KCTD2Q14681 263 aa24.84■■□□□ 1.57
TRAPPC3-208ENST00000616074 FAM47AQ5JRC9 791 aa24.84■■□□□ 1.57
TRAPPC3-208ENST00000616074 SLF1Q9BQI6 1058 aa24.84■■□□□ 1.57
TRAPPC3-208ENST00000616074 GNAT2P19087 354 aa24.83■■□□□ 1.57
TRAPPC3-208ENST00000616074 ZNF792Q3KQV3 632 aa24.83■■□□□ 1.57
TRAPPC3-208ENST00000616074 Q7L0L9 218 aa24.83■■□□□ 1.57
TRAPPC3-208ENST00000616074 ATP11BQ9Y2G3 1177 aa24.83■■□□□ 1.57
TRAPPC3-208ENST00000616074 IGKV6D-41A0A0C4DH26 115 aa24.82■■□□□ 1.56
TRAPPC3-208ENST00000616074 F5H6K3 240 aa24.82■■□□□ 1.56
TRAPPC3-208ENST00000616074 PRDM1O75626 825 aa24.82■■□□□ 1.56
TRAPPC3-208ENST00000616074 NDUFB10O96000 172 aa24.82■■□□□ 1.56
TRAPPC3-208ENST00000616074 COPB2P35606 906 aa24.82■■□□□ 1.56
TRAPPC3-208ENST00000616074 KLRC3Q07444 240 aa24.82■■□□□ 1.56
TRAPPC3-208ENST00000616074 LRRC41Q15345 812 aa24.82■■□□□ 1.56
TRAPPC3-208ENST00000616074 SLC39A5Q6ZMH5 540 aa24.82■■□□□ 1.56
TRAPPC3-208ENST00000616074 DEFB123Q8N688 67 aa24.82■■□□□ 1.56
TRAPPC3-208ENST00000616074 TINF2Q9BSI4 451 aa24.82■■□□□ 1.56
TRAPPC3-208ENST00000616074 PCDHB15Q9Y5E8 787 aa24.82■■□□□ 1.56
TRAPPC3-208ENST00000616074 TTC41PQ6P2S7 1318 aa24.82■■□□□ 1.56
TRAPPC3-208ENST00000616074 APPP05067 770 aa24.81■■□□□ 1.56
TRAPPC3-208ENST00000616074 PI4K2BQ8TCG2 481 aa24.81■■□□□ 1.56
TRAPPC3-208ENST00000616074 LBHD1Q9BQE6 289 aaPredicted RBP24.81■■□□□ 1.56
TRAPPC3-208ENST00000616074 CLIP2Q9UDT6 1046 aa24.81■■□□□ 1.56
TRAPPC3-208ENST00000616074 PRKAG2Q9UGJ0 569 aa24.81■■□□□ 1.56
TRAPPC3-208ENST00000616074 NRBP1Q9UHY1 535 aa24.81■■□□□ 1.56
TRAPPC3-208ENST00000616074 DIS3Q9Y2L1 958 aaKnown RBP24.81■■□□□ 1.56
TRAPPC3-208ENST00000616074 PATL2C9JE40 543 aaKnown RBP24.8■■□□□ 1.56
TRAPPC3-208ENST00000616074 TAL1P17542 331 aaPredicted RBP24.8■■□□□ 1.56
TRAPPC3-208ENST00000616074 ADCYAP1R1P41586 468 aa24.8■■□□□ 1.56
TRAPPC3-208ENST00000616074 SNRNP48Q6IEG0 339 aaKnown RBP24.8■■□□□ 1.56
TRAPPC3-208ENST00000616074 IFNL3Q8IZI9 196 aa24.8■■□□□ 1.56
TRAPPC3-208ENST00000616074 OTUD7AQ8TE49 926 aaPredicted RBP24.8■■□□□ 1.56
TRAPPC3-208ENST00000616074 SEC62Q99442 399 aaKnown RBP24.8■■□□□ 1.56
TRAPPC3-208ENST00000616074 TEX13BQ9BXU2 312 aa24.8■■□□□ 1.56
TRAPPC3-208ENST00000616074 SNX17Q15036 470 aa24.79■■□□□ 1.56
TRAPPC3-208ENST00000616074 LRRFIP1Q32MZ4 808 aaKnown RBP24.79■■□□□ 1.56
TRAPPC3-208ENST00000616074 TRIM60Q495X7 471 aa24.79■■□□□ 1.56
TRAPPC3-208ENST00000616074 ZNF444Q8N0Y2 327 aaPredicted RBP24.79■■□□□ 1.56
TRAPPC3-208ENST00000616074 FERMT2Q96AC1 680 aa24.79■■□□□ 1.56
TRAPPC3-208ENST00000616074 CEP95Q96GE4 821 aa24.79■■□□□ 1.56
TRAPPC3-208ENST00000616074 ZNF287Q9HBT7 754 aa24.79■■□□□ 1.56
TRAPPC3-208ENST00000616074 XPNPEP3Q9NQH7 507 aa24.79■■□□□ 1.56
TRAPPC3-208ENST00000616074 RIPK3Q9Y572 518 aa24.79■■□□□ 1.56
TRAPPC3-208ENST00000616074 ERC2O15083 957 aa24.78■■□□□ 1.56
TRAPPC3-208ENST00000616074 RARBP10826 455 aa24.78■■□□□ 1.56
TRAPPC3-208ENST00000616074 PRPF38AQ8NAV1 312 aaKnown RBP24.78■■□□□ 1.56
TRAPPC3-208ENST00000616074 ZNF865P0CJ78 1059 aaPredicted RBP24.77■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms