RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 MLKLQ8NB16 471 aa10.56□□□□□ -0.72
CLTCL1-208ENST00000615606 GINS2Q9Y248 185 aa10.56□□□□□ -0.72
CLTCL1-208ENST00000615606 CYP2E1P05181 493 aaPredicted RBP10.56□□□□□ -0.72
CLTCL1-208ENST00000615606 GBP2P32456 591 aaPredicted RBP10.56□□□□□ -0.72
CLTCL1-208ENST00000615606 STAT2P52630 851 aa10.56□□□□□ -0.72
CLTCL1-208ENST00000615606 MYCT1Q8N699 235 aa10.56□□□□□ -0.72
CLTCL1-208ENST00000615606 DYNLL2Q96FJ2 89 aa10.56□□□□□ -0.72
CLTCL1-208ENST00000615606 PKNOX2Q96KN3 472 aa10.56□□□□□ -0.72
CLTCL1-208ENST00000615606 TTC14Q96N46 770 aa10.56□□□□□ -0.72
CLTCL1-208ENST00000615606 TRIM6Q9C030 488 aaPredicted RBP10.56□□□□□ -0.72
CLTCL1-208ENST00000615606 ADD3Q9UEY8 706 aaKnown RBP10.56□□□□□ -0.72
CLTCL1-208ENST00000615606 PCDHA12Q9UN75 941 aa10.56□□□□□ -0.72
CLTCL1-208ENST00000615606 CCDC66A2RUB6 948 aa10.56□□□□□ -0.72
CLTCL1-208ENST00000615606 BRD1O95696 1058 aa10.56□□□□□ -0.72
CLTCL1-208ENST00000615606 SLC15A2Q16348 729 aa10.56□□□□□ -0.72
CLTCL1-208ENST00000615606 ADCK5Q3MIX3 580 aa10.56□□□□□ -0.72
CLTCL1-208ENST00000615606 SH3RF3Q8TEJ3 882 aaPredicted RBP10.56□□□□□ -0.72
CLTCL1-208ENST00000615606 IWS1Q96ST2 819 aa10.56□□□□□ -0.72
CLTCL1-208ENST00000615606 CTNND2Q9UQB3 1225 aa10.56□□□□□ -0.72
CLTCL1-208ENST00000615606 MROH7-TTC4A0A0A0MT08 1334 aa10.56□□□□□ -0.72
CLTCL1-208ENST00000615606 UQCRHLA0A096LP55 91 aa10.56□□□□□ -0.72
CLTCL1-208ENST00000615606 UQCRHP07919 91 aa10.56□□□□□ -0.72
CLTCL1-208ENST00000615606 TBC1D10BQ4KMP7 808 aaPredicted RBP10.56□□□□□ -0.72
CLTCL1-208ENST00000615606 SPECC1Q5M775 1068 aa10.56□□□□□ -0.72
CLTCL1-208ENST00000615606 MIGA2Q7L4E1 593 aa10.56□□□□□ -0.72
CLTCL1-208ENST00000615606 DPP9Q86TI2 863 aa10.56□□□□□ -0.72
CLTCL1-208ENST00000615606 DDX25Q9UHL0 483 aaKnown RBP10.56□□□□□ -0.72
CLTCL1-208ENST00000615606 SH2B2O14492 632 aaPredicted RBP10.55□□□□□ -0.72
CLTCL1-208ENST00000615606 FMNL1O95466 1100 aaPredicted RBP10.55□□□□□ -0.72
CLTCL1-208ENST00000615606 CHRNA5P30532 468 aa10.55□□□□□ -0.72
CLTCL1-208ENST00000615606 LIFRP42702 1097 aa10.55□□□□□ -0.72
CLTCL1-208ENST00000615606 KRT83P78385 493 aa10.55□□□□□ -0.72
CLTCL1-208ENST00000615606 SCRN1Q12765 414 aa10.55□□□□□ -0.72
CLTCL1-208ENST00000615606 PRPF4BQ13523 1007 aaKnown RBP10.55□□□□□ -0.72
CLTCL1-208ENST00000615606 KCTD1Q719H9 257 aa10.55□□□□□ -0.72
CLTCL1-208ENST00000615606 DGKHQ86XP1 1220 aa10.55□□□□□ -0.72
CLTCL1-208ENST00000615606 C2orf69Q8N8R5 385 aa10.55□□□□□ -0.72
CLTCL1-208ENST00000615606 RABGAP1Q9Y3P9 1069 aa10.55□□□□□ -0.72
CLTCL1-208ENST00000615606 ATP6V0A2Q9Y487 856 aa10.55□□□□□ -0.72
CLTCL1-208ENST00000615606 H0YHG0 523 aa10.55□□□□□ -0.72
CLTCL1-208ENST00000615606 SNW1Q13573 536 aaKnown RBP10.55□□□□□ -0.72
CLTCL1-208ENST00000615606 MAP9Q49MG5 647 aa10.55□□□□□ -0.72
CLTCL1-208ENST00000615606 SYDE2Q5VT97 1194 aa10.55□□□□□ -0.72
CLTCL1-208ENST00000615606 DHX37Q8IY37 1157 aaKnown RBP10.55□□□□□ -0.72
CLTCL1-208ENST00000615606 CCDC42Q96M95 316 aa10.55□□□□□ -0.72
CLTCL1-208ENST00000615606 ZNF341Q9BYN7 854 aa10.55□□□□□ -0.72
CLTCL1-208ENST00000615606 PNMA3Q9UL41 463 aa10.55□□□□□ -0.72
CLTCL1-208ENST00000615606 SNAP23O00161 211 aa10.55□□□□□ -0.72
CLTCL1-208ENST00000615606 MAEAQ7L5Y9 396 aa10.55□□□□□ -0.72
CLTCL1-208ENST00000615606 HACE1Q8IYU2 909 aa10.55□□□□□ -0.72
CLTCL1-208ENST00000615606 NOC4LQ9BVI4 516 aaKnown RBP10.55□□□□□ -0.72
CLTCL1-208ENST00000615606 TDRD3Q9H7E2 651 aaKnown RBP10.55□□□□□ -0.72
CLTCL1-208ENST00000615606 ABT1Q9ULW3 272 aaKnown RBP10.55□□□□□ -0.72
CLTCL1-208ENST00000615606 USP42Q9H9J4 1324 aaKnown RBP10.55□□□□□ -0.72
CLTCL1-208ENST00000615606 IQCA1LA6NCM1 817 aa10.55□□□□□ -0.72
CLTCL1-208ENST00000615606 ACTN2P35609 894 aa10.55□□□□□ -0.72
CLTCL1-208ENST00000615606 TRAPPC10P48553 1259 aa10.55□□□□□ -0.72
CLTCL1-208ENST00000615606 PAK1Q13153 545 aa10.55□□□□□ -0.72
CLTCL1-208ENST00000615606 POSTNQ15063 836 aa10.55□□□□□ -0.72
CLTCL1-208ENST00000615606 HOOK3Q86VS8 718 aa10.55□□□□□ -0.72
CLTCL1-208ENST00000615606 CCDC125Q86Z20 511 aa10.55□□□□□ -0.72
CLTCL1-208ENST00000615606 LMBR1Q8WVP7 490 aa10.55□□□□□ -0.72
CLTCL1-208ENST00000615606 FAM84BQ96KN1 310 aaPredicted RBP10.55□□□□□ -0.72
CLTCL1-208ENST00000615606 RIPOR2Q9Y4F9 1068 aa10.55□□□□□ -0.72
CLTCL1-208ENST00000615606 TRPC3Q13507 836 aa10.54□□□□□ -0.72
CLTCL1-208ENST00000615606 DYMQ7RTS9 669 aa10.54□□□□□ -0.72
CLTCL1-208ENST00000615606 CSGALNACT2Q8N6G5 542 aa10.54□□□□□ -0.72
CLTCL1-208ENST00000615606 FBXO18Q8NFZ0 1043 aa10.54□□□□□ -0.72
CLTCL1-208ENST00000615606 ZSWIM5Q9P217 1185 aa10.54□□□□□ -0.72
CLTCL1-208ENST00000615606 LUC7L2Q9Y383 392 aaKnown RBP10.54□□□□□ -0.72
CLTCL1-208ENST00000615606 CYP2D7A0A087X1C5 515 aa10.54□□□□□ -0.72
CLTCL1-208ENST00000615606 GSTTP1A0A1W2PQM5 241 aa10.54□□□□□ -0.72
CLTCL1-208ENST00000615606 BTBD18B2RXH4 712 aa10.54□□□□□ -0.72
CLTCL1-208ENST00000615606 NTSR2O95665 410 aa10.54□□□□□ -0.72
CLTCL1-208ENST00000615606 ADALQ6DHV7 355 aa10.54□□□□□ -0.72
CLTCL1-208ENST00000615606 STYK1Q6J9G0 422 aa10.54□□□□□ -0.72
CLTCL1-208ENST00000615606 TBC1D16Q8TBP0 767 aa10.54□□□□□ -0.72
CLTCL1-208ENST00000615606 CENPHQ9H3R5 247 aa10.54□□□□□ -0.72
CLTCL1-208ENST00000615606 ZNRF3Q9ULT6 936 aa10.54□□□□□ -0.72
CLTCL1-208ENST00000615606 PCDHA4Q9UN74 947 aa10.54□□□□□ -0.72
CLTCL1-208ENST00000615606 TRPC6Q9Y210 931 aa10.54□□□□□ -0.72
CLTCL1-208ENST00000615606 MROH1Q8NDA8 1641 aa10.54□□□□□ -0.72
CLTCL1-208ENST00000615606 H0YCG3 227 aa10.54□□□□□ -0.72
CLTCL1-208ENST00000615606 CNGA1P29973 690 aa10.54□□□□□ -0.72
CLTCL1-208ENST00000615606 FAM160B1Q5W0V3 765 aa10.54□□□□□ -0.72
CLTCL1-208ENST00000615606 DEPTORQ8TB45 409 aa10.54□□□□□ -0.72
CLTCL1-208ENST00000615606 STAG1Q8WVM7 1258 aa10.54□□□□□ -0.72
CLTCL1-208ENST00000615606 MRPL44Q9H9J2 332 aaKnown RBP10.54□□□□□ -0.72
CLTCL1-208ENST00000615606 PXDNLA1KZ92 1463 aa10.54□□□□□ -0.72
CLTCL1-208ENST00000615606 LAD1O00515 517 aa10.54□□□□□ -0.72
CLTCL1-208ENST00000615606 GCFC2P16383 781 aaKnown RBP10.54□□□□□ -0.72
CLTCL1-208ENST00000615606 ARID5AQ03989 594 aa10.54□□□□□ -0.72
CLTCL1-208ENST00000615606 TAF12Q16514 161 aa10.54□□□□□ -0.72
CLTCL1-208ENST00000615606 DPH6Q7L8W6 267 aa10.54□□□□□ -0.72
CLTCL1-208ENST00000615606 UIMC1Q96RL1 719 aa10.54□□□□□ -0.72
CLTCL1-208ENST00000615606 FOXP1Q9H334 677 aaPredicted RBP10.54□□□□□ -0.72
CLTCL1-208ENST00000615606 IFNKQ9P0W0 207 aa10.54□□□□□ -0.72
CLTCL1-208ENST00000615606 A0A0G2JLW4 131 aa10.53□□□□□ -0.72
CLTCL1-208ENST00000615606 GRIN3BO60391 1043 aa10.53□□□□□ -0.72
CLTCL1-208ENST00000615606 GCNT3O95395 438 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms