RNA–Protein interactions for RNA: ENST00000615065.1

PRKN-211, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-211ENST00000615065 LRRFIP1Q32MZ4 808 aaKnown RBP17.72■□□□□ 0.43
PRKN-211ENST00000615065 DPP9Q86TI2 863 aa17.72■□□□□ 0.43
PRKN-211ENST00000615065 NCAPG2Q86XI2 1143 aa17.72■□□□□ 0.43
PRKN-211ENST00000615065 FSD1Q9BTV5 496 aa17.72■□□□□ 0.43
PRKN-211ENST00000615065 PCDH10Q9P2E7 1040 aa17.72■□□□□ 0.43
PRKN-211ENST00000615065 SALL3Q9BXA9 1300 aa17.72■□□□□ 0.43
PRKN-211ENST00000615065 PLXNA1Q9UIW2 1896 aa17.71■□□□□ 0.43
PRKN-211ENST00000615065 STRNO43815 780 aa17.71■□□□□ 0.43
PRKN-211ENST00000615065 COBLO75128 1261 aa17.71■□□□□ 0.43
PRKN-211ENST00000615065 FAM83BQ5T0W9 1011 aa17.71■□□□□ 0.43
PRKN-211ENST00000615065 TRPV1Q8NER1 839 aa17.71■□□□□ 0.43
PRKN-211ENST00000615065 MROH8Q9H579 483 aa17.71■□□□□ 0.43
PRKN-211ENST00000615065 ADAMTS5Q9UNA0 930 aa17.71■□□□□ 0.43
PRKN-211ENST00000615065 PATL2C9JE40 543 aaKnown RBP17.7■□□□□ 0.42
PRKN-211ENST00000615065 PRDM1O75626 825 aa17.7■□□□□ 0.42
PRKN-211ENST00000615065 COL6A1P12109 1028 aa17.7■□□□□ 0.42
PRKN-211ENST00000615065 CNGA1P29973 690 aa17.7■□□□□ 0.42
PRKN-211ENST00000615065 ZMYM1Q5SVZ6 1142 aa17.7■□□□□ 0.42
PRKN-211ENST00000615065 ANKRD45Q5TZF3 282 aa17.7■□□□□ 0.42
PRKN-211ENST00000615065 IFNL3Q8IZI9 196 aa17.7■□□□□ 0.42
PRKN-211ENST00000615065 YTHDC1Q96MU7 727 aaKnown RBP17.7■□□□□ 0.42
PRKN-211ENST00000615065 NUP88Q99567 741 aaPredicted RBP17.7■□□□□ 0.42
PRKN-211ENST00000615065 PPP1R9AQ9ULJ8 1098 aa17.7■□□□□ 0.42
PRKN-211ENST00000615065 ZMYND8Q9ULU4 1186 aaPredicted RBP17.7■□□□□ 0.42
PRKN-211ENST00000615065 IGKV6D-41A0A0C4DH26 115 aa17.69■□□□□ 0.42
PRKN-211ENST00000615065 VWA5AO00534 786 aa17.69■□□□□ 0.42
PRKN-211ENST00000615065 CYBAP13498 195 aa17.69■□□□□ 0.42
PRKN-211ENST00000615065 OLFML2BQ68BL8 750 aa17.69■□□□□ 0.42
PRKN-211ENST00000615065 NYAP2Q9P242 653 aa17.69■□□□□ 0.42
PRKN-211ENST00000615065 STAP2Q9UGK3 403 aa17.69■□□□□ 0.42
PRKN-211ENST00000615065 DDX20Q9UHI6 824 aaKnown RBP17.69■□□□□ 0.42
PRKN-211ENST00000615065 SLC25A27O95847 323 aa17.68■□□□□ 0.42
PRKN-211ENST00000615065 NDUFB10O96000 172 aa17.68■□□□□ 0.42
PRKN-211ENST00000615065 ABRAQ8N0Z2 381 aa17.68■□□□□ 0.42
PRKN-211ENST00000615065 REPS2Q8NFH8 660 aa17.68■□□□□ 0.42
PRKN-211ENST00000615065 NACAP1Q9BZK3 213 aa17.68■□□□□ 0.42
PRKN-211ENST00000615065 F5H6K3 240 aa17.67■□□□□ 0.42
PRKN-211ENST00000615065 FCER1AP12319 257 aa17.67■□□□□ 0.42
PRKN-211ENST00000615065 SYN1P17600 705 aa17.67■□□□□ 0.42
PRKN-211ENST00000615065 KLRC3Q07444 240 aa17.67■□□□□ 0.42
PRKN-211ENST00000615065 LRRC26Q2I0M4 334 aa17.67■□□□□ 0.42
PRKN-211ENST00000615065 CCDC129Q6ZRS4 1044 aa17.67■□□□□ 0.42
PRKN-211ENST00000615065 RIOX2Q8IUF8 465 aa17.67■□□□□ 0.42
PRKN-211ENST00000615065 ZNF444Q8N0Y2 327 aaPredicted RBP17.67■□□□□ 0.42
PRKN-211ENST00000615065 CEP95Q96GE4 821 aa17.67■□□□□ 0.42
PRKN-211ENST00000615065 SLF1Q9BQI6 1058 aa17.67■□□□□ 0.42
PRKN-211ENST00000615065 NAPBQ9H115 298 aa17.67■□□□□ 0.42
PRKN-211ENST00000615065 ZNF287Q9HBT7 754 aa17.67■□□□□ 0.42
PRKN-211ENST00000615065 SLC5A4Q9NY91 659 aa17.67■□□□□ 0.42
PRKN-211ENST00000615065 CLIP2Q9UDT6 1046 aa17.67■□□□□ 0.42
PRKN-211ENST00000615065 ZBTB47Q9UFB7 747 aaPredicted RBP17.67■□□□□ 0.42
PRKN-211ENST00000615065 ZNF214Q9UL59 606 aaPredicted RBP17.67■□□□□ 0.42
PRKN-211ENST00000615065 SZT2Q5T011 3432 aa17.66■□□□□ 0.42
PRKN-211ENST00000615065 FOXP2O15409 715 aa17.66■□□□□ 0.42
PRKN-211ENST00000615065 MSCO60682 206 aa17.66■□□□□ 0.42
PRKN-211ENST00000615065 STAT3P40763 770 aa17.66■□□□□ 0.42
PRKN-211ENST00000615065 HDAC1Q13547 482 aaPredicted RBP17.66■□□□□ 0.42
PRKN-211ENST00000615065 MAML3Q96JK9 1138 aa17.66■□□□□ 0.42
PRKN-211ENST00000615065 MMP19Q99542 508 aa17.66■□□□□ 0.42
PRKN-211ENST00000615065 MTMR4Q9NYA4 1195 aa17.66■□□□□ 0.42
PRKN-211ENST00000615065 PLIN4Q96Q06 1357 aa17.66■□□□□ 0.42
PRKN-211ENST00000615065 PGK2P07205 417 aa17.65■□□□□ 0.42
PRKN-211ENST00000615065 PDE1AP54750 535 aa17.65■□□□□ 0.42
PRKN-211ENST00000615065 PPARAQ07869 468 aa17.65■□□□□ 0.42
PRKN-211ENST00000615065 FAM47AQ5JRC9 791 aa17.65■□□□□ 0.42
PRKN-211ENST00000615065 PRAMEF19Q5SWL8 479 aa17.65■□□□□ 0.42
PRKN-211ENST00000615065 ANO1Q5XXA6 986 aa17.65■□□□□ 0.42
PRKN-211ENST00000615065 LRRC47Q8N1G4 583 aaKnown RBP17.65■□□□□ 0.42
PRKN-211ENST00000615065 GDF15Q99988 308 aa17.65■□□□□ 0.42
PRKN-211ENST00000615065 DNAH12Q6ZR08 3092 aa17.65■□□□□ 0.42
PRKN-211ENST00000615065 SMCHD1A6NHR9 2005 aa17.64■□□□□ 0.41
PRKN-211ENST00000615065 TTLL1O95922 423 aa17.64■□□□□ 0.41
PRKN-211ENST00000615065 PDE4BQ07343 736 aa17.64■□□□□ 0.41
PRKN-211ENST00000615065 MKL1Q969V6 931 aa17.64■□□□□ 0.41
PRKN-211ENST00000615065 SENP6Q9GZR1 1112 aaPredicted RBP17.64■□□□□ 0.41
PRKN-211ENST00000615065 A0A1W2PPC1 479 aa17.63■□□□□ 0.41
PRKN-211ENST00000615065 DNM1LO00429 736 aa17.63■□□□□ 0.41
PRKN-211ENST00000615065 SEPT4O43236 478 aa17.63■□□□□ 0.41
PRKN-211ENST00000615065 SLC3A2P08195 630 aaKnown RBP17.63■□□□□ 0.41
PRKN-211ENST00000615065 TSPY3P0CV98 308 aa17.63■□□□□ 0.41
PRKN-211ENST00000615065 TSPY8P0CW00 308 aa17.63■□□□□ 0.41
PRKN-211ENST00000615065 MAGEA10P43363 369 aaPredicted RBP17.63■□□□□ 0.41
PRKN-211ENST00000615065 KCTD2Q14681 263 aa17.63■□□□□ 0.41
PRKN-211ENST00000615065 SNRNP48Q6IEG0 339 aaKnown RBP17.63■□□□□ 0.41
PRKN-211ENST00000615065 NEDD1Q8NHV4 660 aa17.63■□□□□ 0.41
PRKN-211ENST00000615065 EVI5LQ96CN4 794 aa17.63■□□□□ 0.41
PRKN-211ENST00000615065 TEX13BQ9BXU2 312 aa17.63■□□□□ 0.41
PRKN-211ENST00000615065 COPB2P35606 906 aa17.62■□□□□ 0.41
PRKN-211ENST00000615065 TFAP4Q01664 338 aa17.62■□□□□ 0.41
PRKN-211ENST00000615065 CTDSPL2Q05D32 466 aa17.62■□□□□ 0.41
PRKN-211ENST00000615065 ZNF792Q3KQV3 632 aa17.62■□□□□ 0.41
PRKN-211ENST00000615065 GJC2Q5T442 439 aaPredicted RBP17.62■□□□□ 0.41
PRKN-211ENST00000615065 VPS53Q5VIR6 699 aa17.62■□□□□ 0.41
PRKN-211ENST00000615065 PRPF38AQ8NAV1 312 aaKnown RBP17.62■□□□□ 0.41
PRKN-211ENST00000615065 GMCL1P1Q8NEA9 526 aa17.62■□□□□ 0.41
PRKN-211ENST00000615065 KIFC2Q96AC6 838 aa17.62■□□□□ 0.41
PRKN-211ENST00000615065 INCENPQ9NQS7 918 aa17.62■□□□□ 0.41
PRKN-211ENST00000615065 SYNPO2Q9UMS6 1093 aa17.62■□□□□ 0.41
PRKN-211ENST00000615065 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.62■□□□□ 0.41
PRKN-211ENST00000615065 RIPK3Q9Y572 518 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms