RNA–Protein interactions for RNA: ENST00000614616.4

CHD1-212, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD1, Length 8,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-212ENST00000614616 ABCC5O15440 1437 aa15.1■□□□□ 0.01
CHD1-212ENST00000614616 GMNCA6NCL1 334 aa15.09■□□□□ 0.01
CHD1-212ENST00000614616 DEXIO95424 95 aa15.09■□□□□ 0.01
CHD1-212ENST00000614616 GGCXP38435 758 aa15.09■□□□□ 0.01
CHD1-212ENST00000614616 ENO4A6NNW6 628 aa15.09■□□□□ 0.01
CHD1-212ENST00000614616 IKBKBO14920 756 aa15.09■□□□□ 0.01
CHD1-212ENST00000614616 AP2B1P63010 937 aa15.09■□□□□ 0.01
CHD1-212ENST00000614616 STAMBPL1Q96FJ0 436 aa15.09■□□□□ 0.01
CHD1-212ENST00000614616 UIMC1Q96RL1 719 aa15.09■□□□□ 0.01
CHD1-212ENST00000614616 GIPC1O14908 333 aa15.09■□□□□ 0.01
CHD1-212ENST00000614616 HARSP12081 509 aaKnown RBP15.09■□□□□ 0.01
CHD1-212ENST00000614616 IFNAR2P48551 515 aa15.09■□□□□ 0.01
CHD1-212ENST00000614616 ST5P78524 1137 aa15.09■□□□□ 0.01
CHD1-212ENST00000614616 MYO1EQ12965 1108 aa15.09■□□□□ 0.01
CHD1-212ENST00000614616 CHMP2AO43633 222 aa15.09■□□□□ 0.01
CHD1-212ENST00000614616 NAPAP54920 295 aa15.09■□□□□ 0.01
CHD1-212ENST00000614616 NOP14P78316 857 aaKnown RBP15.09■□□□□ 0.01
CHD1-212ENST00000614616 PLCB4Q15147 1175 aa15.09■□□□□ 0.01
CHD1-212ENST00000614616 SGSM2O43147 1006 aa15.09■□□□□ 0.01
CHD1-212ENST00000614616 BBOF1Q8ND07 529 aa15.09■□□□□ 0.01
CHD1-212ENST00000614616 GRM8O00222 908 aa15.09■□□□□ 0.01
CHD1-212ENST00000614616 MAN1A1P33908 653 aa15.09■□□□□ 0.01
CHD1-212ENST00000614616 KLC1Q07866 573 aa15.09■□□□□ 0.01
CHD1-212ENST00000614616 MAPK8IP1Q9UQF2 711 aa15.09■□□□□ 0.01
CHD1-212ENST00000614616 SPAG7O75391 227 aa15.08■□□□□ 0.01
CHD1-212ENST00000614616 STARD3NLO95772 234 aa15.08■□□□□ 0.01
CHD1-212ENST00000614616 ZSCAN29Q8IWY8 852 aaPredicted RBP15.08■□□□□ 0.01
CHD1-212ENST00000614616 VPS37BQ9H9H4 285 aa15.08■□□□□ 0.01
CHD1-212ENST00000614616 FANCLQ9NW38 375 aa15.08■□□□□ 0.01
CHD1-212ENST00000614616 ZFYVE9O95405 1425 aa15.08■□□□□ 0.01
CHD1-212ENST00000614616 PI4KAP2A4QPH2 592 aa15.08■□□□□ 0
CHD1-212ENST00000614616 ZMYND10O75800 440 aa15.08■□□□□ 0
CHD1-212ENST00000614616 ADCY2Q08462 1091 aa15.08■□□□□ 0
CHD1-212ENST00000614616 PALM2Q8IXS6 379 aa15.08■□□□□ 0
CHD1-212ENST00000614616 FNBP4Q8N3X1 1017 aaPredicted RBP15.08■□□□□ 0
CHD1-212ENST00000614616 PI4KAP1Q8N8J0 262 aa15.08■□□□□ 0
CHD1-212ENST00000614616 RASGRF2O14827 1237 aa15.08■□□□□ 0
CHD1-212ENST00000614616 TRPA1O75762 1119 aa15.08■□□□□ 0
CHD1-212ENST00000614616 MYCNP04198 464 aaPredicted RBP15.08■□□□□ 0
CHD1-212ENST00000614616 KRT5P13647 590 aa15.08■□□□□ 0
CHD1-212ENST00000614616 TBC1D1Q86TI0 1168 aaPredicted RBP15.08■□□□□ 0
CHD1-212ENST00000614616 CRACR2BQ8N4Y2 399 aaPredicted RBP15.08■□□□□ 0
CHD1-212ENST00000614616 FMO2Q99518 471 aa15.08■□□□□ 0
CHD1-212ENST00000614616 SERPINI1Q99574 410 aa15.08■□□□□ 0
CHD1-212ENST00000614616 ANLNQ9NQW6 1124 aa15.08■□□□□ 0
CHD1-212ENST00000614616 MYH13Q9UKX3 1938 aa15.08■□□□□ 0
CHD1-212ENST00000614616 TRIM37O94972 964 aa15.08■□□□□ 0
CHD1-212ENST00000614616 CWF19L2Q2TBE0 894 aaKnown RBP15.08■□□□□ 0
CHD1-212ENST00000614616 GLE1Q53GS7 698 aaKnown RBP15.08■□□□□ 0
CHD1-212ENST00000614616 CCDC159P0C7I6 412 aa15.08■□□□□ 0
CHD1-212ENST00000614616 LAMB3Q13751 1172 aa15.08■□□□□ 0
CHD1-212ENST00000614616 FBXW10Q5XX13 1052 aa15.08■□□□□ 0
CHD1-212ENST00000614616 MSH2P43246 934 aa15.07■□□□□ 0
CHD1-212ENST00000614616 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.07■□□□□ 0
CHD1-212ENST00000614616 C6orf50Q9HD87 102 aa15.07■□□□□ 0
CHD1-212ENST00000614616 CORO7P57737 925 aa15.07■□□□□ 0
CHD1-212ENST00000614616 OCA2Q04671 838 aa15.07■□□□□ 0
CHD1-212ENST00000614616 BEND6Q5SZJ8 279 aaPredicted RBP15.07■□□□□ 0
CHD1-212ENST00000614616 ANKRD35Q8N283 1001 aa15.07■□□□□ 0
CHD1-212ENST00000614616 TRIML2Q8N7C3 387 aa15.07■□□□□ 0
CHD1-212ENST00000614616 H7C1D1 291 aa15.07■□□□□ 0
CHD1-212ENST00000614616 RBM5P52756 815 aaKnown RBP eCLIP15.07■□□□□ 0
CHD1-212ENST00000614616 ME3Q16798 604 aa15.07■□□□□ 0
CHD1-212ENST00000614616 TEKT1Q969V4 418 aa15.07■□□□□ 0
CHD1-212ENST00000614616 MYH1P12882 1939 aa15.07■□□□□ 0
CHD1-212ENST00000614616 MYH2Q9UKX2 1941 aa15.07■□□□□ 0
CHD1-212ENST00000614616 MYH4Q9Y623 1939 aa15.07■□□□□ 0
CHD1-212ENST00000614616 MCF2LO15068 1137 aa15.07■□□□□ 0
CHD1-212ENST00000614616 TSPY3P0CV98 308 aa15.07■□□□□ 0
CHD1-212ENST00000614616 TSPY8P0CW00 308 aa15.07■□□□□ 0
CHD1-212ENST00000614616 PPWD1Q96BP3 646 aaKnown RBP15.07■□□□□ 0
CHD1-212ENST00000614616 SERPINI2O75830 405 aa15.07■□□□□ 0
CHD1-212ENST00000614616 TTC4O95801 387 aa15.07■□□□□ 0
CHD1-212ENST00000614616 RCN2Q14257 317 aa15.07■□□□□ 0
CHD1-212ENST00000614616 KIAA2013Q8IYS2 634 aa15.07■□□□□ 0
CHD1-212ENST00000614616 DACT3Q96B18 629 aaPredicted RBP15.07■□□□□ 0
CHD1-212ENST00000614616 CRNKL1Q9BZJ0 848 aaKnown RBP15.07■□□□□ 0
CHD1-212ENST00000614616 VAT1LQ9HCJ6 419 aa15.07■□□□□ 0
CHD1-212ENST00000614616 GFAPP14136 432 aa15.07■□□□□ 0
CHD1-212ENST00000614616 NDUFA8P51970 172 aa15.07■□□□□ 0
CHD1-212ENST00000614616 TRMT44Q8IYL2 757 aaKnown RBP15.07■□□□□ 0
CHD1-212ENST00000614616 PDLIM2Q96JY6 352 aa15.07■□□□□ 0
CHD1-212ENST00000614616 INTUQ9ULD6 942 aa15.07■□□□□ 0
CHD1-212ENST00000614616 ANKRD65E5RJM6 399 aa15.06■□□□□ 0
CHD1-212ENST00000614616 RAPGEF6Q8TEU7 1601 aa15.06■□□□□ 0
CHD1-212ENST00000614616 UQCRFS1P1P0C7P4 283 aa15.06■□□□□ 0
CHD1-212ENST00000614616 CPA1P15085 419 aa15.06■□□□□ 0
CHD1-212ENST00000614616 TMED10P49755 219 aaKnown RBP15.06■□□□□ 0
CHD1-212ENST00000614616 OGFOD1Q8N543 542 aa15.06■□□□□ 0
CHD1-212ENST00000614616 SLC20A2Q08357 652 aa15.06■□□□□ 0
CHD1-212ENST00000614616 ICA1LQ8NDH6 482 aa15.06■□□□□ 0
CHD1-212ENST00000614616 CCDC85AQ96PX6 553 aaPredicted RBP15.06■□□□□ 0
CHD1-212ENST00000614616 RIC8AQ9NPQ8 531 aa15.06■□□□□ 0
CHD1-212ENST00000614616 ATG3Q9NT62 314 aa15.06■□□□□ 0
CHD1-212ENST00000614616 ANGEL1Q9UNK9 670 aaKnown RBP15.06■□□□□ 0
CHD1-212ENST00000614616 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.06■□□□□ 0
CHD1-212ENST00000614616 MMEL1Q495T6 779 aa15.06■□□□□ 0
CHD1-212ENST00000614616 MEFVO15553 781 aaPredicted RBP15.06■□□□□ 0
CHD1-212ENST00000614616 ALDH1L1O75891 902 aa15.06■□□□□ 0
CHD1-212ENST00000614616 CDR2Q01850 454 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms