RNA–Protein interactions for RNA: ENST00000613721.4

TUBD1-216, Transcript of tubulin delta 1, humanhuman

TSL 5 BASIC

Gene TUBD1, Length 2,184 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-216ENST00000613721 MED15Q96RN5 788 aa13.59□□□□□ -0.23
TUBD1-216ENST00000613721 KAT14Q9H8E8 782 aa13.59□□□□□ -0.23
TUBD1-216ENST00000613721 CGNQ9P2M7 1197 aaKnown RBP13.59□□□□□ -0.23
TUBD1-216ENST00000613721 POLLQ9UGP5 575 aa13.59□□□□□ -0.23
TUBD1-216ENST00000613721 XDHP47989 1333 aa13.59□□□□□ -0.23
TUBD1-216ENST00000613721 IGSF3O75054 1194 aa13.59□□□□□ -0.23
TUBD1-216ENST00000613721 SLU7O95391 586 aaKnown RBP13.59□□□□□ -0.23
TUBD1-216ENST00000613721 LDHBP07195 334 aaKnown RBP13.59□□□□□ -0.23
TUBD1-216ENST00000613721 USP5P45974 858 aa13.59□□□□□ -0.23
TUBD1-216ENST00000613721 GOLGA8FQ08AF8 430 aa13.59□□□□□ -0.23
TUBD1-216ENST00000613721 GOLGA8DPQ0D2H9 430 aa13.59□□□□□ -0.23
TUBD1-216ENST00000613721 TBX2Q13207 712 aaPredicted RBP13.59□□□□□ -0.23
TUBD1-216ENST00000613721 SPECC1LQ69YQ0 1117 aa13.59□□□□□ -0.23
TUBD1-216ENST00000613721 HOMER1Q86YM7 354 aa13.59□□□□□ -0.23
TUBD1-216ENST00000613721 WDR66Q8TBY9 1149 aa13.59□□□□□ -0.23
TUBD1-216ENST00000613721 SAMSN1Q9NSI8 373 aaKnown RBP13.59□□□□□ -0.23
TUBD1-216ENST00000613721 ROBO3Q96MS0 1386 aa13.58□□□□□ -0.23
TUBD1-216ENST00000613721 SYNRGQ9UMZ2 1314 aa13.58□□□□□ -0.23
TUBD1-216ENST00000613721 RIMBP2O15034 1052 aa13.58□□□□□ -0.24
TUBD1-216ENST00000613721 ARHGAP6O43182 974 aa13.58□□□□□ -0.24
TUBD1-216ENST00000613721 MMP10P09238 476 aa13.58□□□□□ -0.24
TUBD1-216ENST00000613721 DPYDQ12882 1025 aa13.58□□□□□ -0.24
TUBD1-216ENST00000613721 C12orf60Q5U649 245 aa13.58□□□□□ -0.24
TUBD1-216ENST00000613721 RBM17Q96I25 401 aaKnown RBP13.58□□□□□ -0.24
TUBD1-216ENST00000613721 GSDMAQ96QA5 445 aa13.58□□□□□ -0.24
TUBD1-216ENST00000613721 CALML3P27482 149 aa13.58□□□□□ -0.24
TUBD1-216ENST00000613721 TFAP4Q01664 338 aa13.58□□□□□ -0.24
TUBD1-216ENST00000613721 DGKHQ86XP1 1220 aa13.58□□□□□ -0.24
TUBD1-216ENST00000613721 TMEM139Q8IV31 216 aa13.58□□□□□ -0.24
TUBD1-216ENST00000613721 AMOTL1Q8IY63 956 aa13.58□□□□□ -0.24
TUBD1-216ENST00000613721 PNMA1Q8ND90 353 aa13.58□□□□□ -0.24
TUBD1-216ENST00000613721 PDGFDQ9GZP0 370 aaPredicted RBP13.58□□□□□ -0.24
TUBD1-216ENST00000613721 L2HGDHQ9H9P8 463 aa13.58□□□□□ -0.24
TUBD1-216ENST00000613721 MKRN1Q9UHC7 482 aaKnown RBP13.58□□□□□ -0.24
TUBD1-216ENST00000613721 LEMD3Q9Y2U8 911 aa13.58□□□□□ -0.24
TUBD1-216ENST00000613721 ZSCAN12O43309 604 aa13.57□□□□□ -0.24
TUBD1-216ENST00000613721 CASP1P29466 404 aa13.57□□□□□ -0.24
TUBD1-216ENST00000613721 ETF1P62495 437 aaKnown RBP13.57□□□□□ -0.24
TUBD1-216ENST00000613721 EN1Q05925 392 aaPredicted RBP13.57□□□□□ -0.24
TUBD1-216ENST00000613721 EZH2Q15910 746 aaKnown RBP13.57□□□□□ -0.24
TUBD1-216ENST00000613721 SH3RF3Q8TEJ3 882 aaPredicted RBP13.57□□□□□ -0.24
TUBD1-216ENST00000613721 PYM1Q9BRP8 204 aaKnown RBP13.57□□□□□ -0.24
TUBD1-216ENST00000613721 UTRNP46939 3433 aa13.57□□□□□ -0.24
TUBD1-216ENST00000613721 PHLPP2Q6ZVD8 1323 aa13.57□□□□□ -0.24
TUBD1-216ENST00000613721 CDK5RAP2Q96SN8 1893 aa13.57□□□□□ -0.24
TUBD1-216ENST00000613721 PLSCR1O15162 318 aa13.56□□□□□ -0.24
TUBD1-216ENST00000613721 BAG3O95817 575 aa13.56□□□□□ -0.24
TUBD1-216ENST00000613721 VEGFAP15692 232 aaPredicted RBP13.56□□□□□ -0.24
TUBD1-216ENST00000613721 MCM7P33993 719 aa13.56□□□□□ -0.24
TUBD1-216ENST00000613721 GSTO1P78417 241 aa13.56□□□□□ -0.24
TUBD1-216ENST00000613721 CUL4BQ13620 913 aa13.56□□□□□ -0.24
TUBD1-216ENST00000613721 SPATA1Q5VX52 437 aa13.56□□□□□ -0.24
TUBD1-216ENST00000613721 KLHL10Q6JEL2 608 aa13.56□□□□□ -0.24
TUBD1-216ENST00000613721 ZNF804AQ7Z570 1209 aa13.56□□□□□ -0.24
TUBD1-216ENST00000613721 IQUBQ8NA54 791 aa13.56□□□□□ -0.24
TUBD1-216ENST00000613721 FBXO41Q8TF61 875 aa13.56□□□□□ -0.24
TUBD1-216ENST00000613721 BAG1Q99933 345 aaPredicted RBP13.56□□□□□ -0.24
TUBD1-216ENST00000613721 IL17RBQ9NRM6 502 aa13.56□□□□□ -0.24
TUBD1-216ENST00000613721 A0A1B0GTH6 734 aa13.56□□□□□ -0.24
TUBD1-216ENST00000613721 C6orf229H3BNL8 230 aa13.56□□□□□ -0.24
TUBD1-216ENST00000613721 CD44P16070 742 aaKnown RBP13.56□□□□□ -0.24
TUBD1-216ENST00000613721 NR1I3Q14994 352 aa13.56□□□□□ -0.24
TUBD1-216ENST00000613721 E2F4Q16254 413 aa13.56□□□□□ -0.24
TUBD1-216ENST00000613721 CCDC178Q5BJE1 867 aa13.56□□□□□ -0.24
TUBD1-216ENST00000613721 BLIDQ8IZY5 108 aa13.56□□□□□ -0.24
TUBD1-216ENST00000613721 TC2NQ8N9U0 490 aa13.56□□□□□ -0.24
TUBD1-216ENST00000613721 TBC1D16Q8TBP0 767 aa13.56□□□□□ -0.24
TUBD1-216ENST00000613721 DYNLL2Q96FJ2 89 aa13.56□□□□□ -0.24
TUBD1-216ENST00000613721 MXD3Q9BW11 206 aa13.56□□□□□ -0.24
TUBD1-216ENST00000613721 MKNK2Q9HBH9 465 aa13.56□□□□□ -0.24
TUBD1-216ENST00000613721 SH3GLB2Q9NR46 395 aa13.56□□□□□ -0.24
TUBD1-216ENST00000613721 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.56□□□□□ -0.24
TUBD1-216ENST00000613721 GGA1Q9UJY5 639 aa13.56□□□□□ -0.24
TUBD1-216ENST00000613721 V9GYY5 206 aaPredicted RBP13.56□□□□□ -0.24
TUBD1-216ENST00000613721 STX10O60499 249 aa13.55□□□□□ -0.24
TUBD1-216ENST00000613721 GRM4Q14833 912 aa13.55□□□□□ -0.24
TUBD1-216ENST00000613721 REXO1L1PQ8IX06 675 aa13.55□□□□□ -0.24
TUBD1-216ENST00000613721 ANKS1AQ92625 1134 aa13.55□□□□□ -0.24
TUBD1-216ENST00000613721 GPKOWQ92917 476 aaPredicted RBP eCLIP13.55□□□□□ -0.24
TUBD1-216ENST00000613721 CD209Q9NNX6 404 aa13.55□□□□□ -0.24
TUBD1-216ENST00000613721 PCDHA4Q9UN74 947 aa13.55□□□□□ -0.24
TUBD1-216ENST00000613721 COL11A2P13942 1736 aaPredicted RBP13.55□□□□□ -0.24
TUBD1-216ENST00000613721 TNS1Q9HBL0 1735 aaKnown RBP13.55□□□□□ -0.24
TUBD1-216ENST00000613721 PPEF1O14829 653 aaPredicted RBP13.55□□□□□ -0.24
TUBD1-216ENST00000613721 TSPY3P0CV98 308 aa13.55□□□□□ -0.24
TUBD1-216ENST00000613721 TSPY8P0CW00 308 aa13.55□□□□□ -0.24
TUBD1-216ENST00000613721 GNAQP50148 359 aa13.55□□□□□ -0.24
TUBD1-216ENST00000613721 ADKP55263 362 aaKnown RBP13.55□□□□□ -0.24
TUBD1-216ENST00000613721 STX17P56962 302 aa13.55□□□□□ -0.24
TUBD1-216ENST00000613721 ARL6IP4Q66PJ3 421 aaKnown RBP13.55□□□□□ -0.24
TUBD1-216ENST00000613721 SMYD4Q8IYR2 804 aaPredicted RBP13.55□□□□□ -0.24
TUBD1-216ENST00000613721 STAG2Q8N3U4 1231 aa13.55□□□□□ -0.24
TUBD1-216ENST00000613721 FEZ1Q99689 392 aa13.55□□□□□ -0.24
TUBD1-216ENST00000613721 DNAI1Q9UI46 699 aa13.55□□□□□ -0.24
TUBD1-216ENST00000613721 PPP2R2CQ9Y2T4 447 aa13.55□□□□□ -0.24
TUBD1-216ENST00000613721 FAM205AQ6ZU69 1335 aa13.54□□□□□ -0.24
TUBD1-216ENST00000613721 GOLGA6L9A6NEM1 432 aa13.54□□□□□ -0.24
TUBD1-216ENST00000613721 ADAMTS3O15072 1205 aa13.54□□□□□ -0.24
TUBD1-216ENST00000613721 LDHCP07864 332 aa13.54□□□□□ -0.24
TUBD1-216ENST00000613721 LONP1P36776 959 aaKnown RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms