RNA–Protein interactions for RNA: ENST00000613099.4

VPS13D-213, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13D, Length 16,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-213ENST00000613099 FTOQ9C0B1 505 aaKnown RBP eCLIP5.44□□□□□ -1.54
VPS13D-213ENST00000613099 BIN2Q9UBW5 565 aaPredicted RBP5.44□□□□□ -1.54
VPS13D-213ENST00000613099 INTUQ9ULD6 942 aa5.44□□□□□ -1.54
VPS13D-213ENST00000613099 ST13P50502 369 aaKnown RBP5.44□□□□□ -1.54
VPS13D-213ENST00000613099 ANKRD20A4Q4UJ75 823 aa5.44□□□□□ -1.54
VPS13D-213ENST00000613099 ANKRD20A8PQ5CZ79 823 aa5.44□□□□□ -1.54
VPS13D-213ENST00000613099 ANKRD20A2Q5SQ80 823 aa5.44□□□□□ -1.54
VPS13D-213ENST00000613099 ANKRD20A1Q5TYW2 823 aa5.44□□□□□ -1.54
VPS13D-213ENST00000613099 TMEM60Q9H2L4 133 aa5.44□□□□□ -1.54
VPS13D-213ENST00000613099 SUCLA2Q9P2R7 463 aaPredicted RBP5.44□□□□□ -1.54
VPS13D-213ENST00000613099 FSBPO95073 299 aa5.44□□□□□ -1.54
VPS13D-213ENST00000613099 SYTL4Q96C24 671 aaPredicted RBP5.44□□□□□ -1.54
VPS13D-213ENST00000613099 ATICP31939 592 aa5.44□□□□□ -1.54
VPS13D-213ENST00000613099 AMPD3Q01432 767 aa5.44□□□□□ -1.54
VPS13D-213ENST00000613099 RASGRF1Q13972 1273 aa5.44□□□□□ -1.54
VPS13D-213ENST00000613099 CIDEBQ9UHD4 219 aa5.44□□□□□ -1.54
VPS13D-213ENST00000613099 AFDNP55196 1824 aaKnown RBP5.44□□□□□ -1.54
VPS13D-213ENST00000613099 CTNND1O60716 968 aaKnown RBP5.44□□□□□ -1.54
VPS13D-213ENST00000613099 TCP1P17987 556 aaKnown RBP5.44□□□□□ -1.54
VPS13D-213ENST00000613099 CRELD2Q6UXH1 353 aaPredicted RBP5.44□□□□□ -1.54
VPS13D-213ENST00000613099 TRIM55Q9BYV6 548 aa5.44□□□□□ -1.54
VPS13D-213ENST00000613099 GGA2Q9UJY4 613 aa5.44□□□□□ -1.54
VPS13D-213ENST00000613099 ARHGAP31Q2M1Z3 1444 aa5.44□□□□□ -1.54
VPS13D-213ENST00000613099 MYH8P13535 1937 aa5.44□□□□□ -1.54
VPS13D-213ENST00000613099 RASGRF2O14827 1237 aa5.44□□□□□ -1.54
VPS13D-213ENST00000613099 ALDH1L1O75891 902 aa5.44□□□□□ -1.54
VPS13D-213ENST00000613099 PPP2R5BQ15173 497 aa5.44□□□□□ -1.54
VPS13D-213ENST00000613099 DNAJC9Q8WXX5 260 aa5.44□□□□□ -1.54
VPS13D-213ENST00000613099 PANX2Q96RD6 677 aa5.44□□□□□ -1.54
VPS13D-213ENST00000613099 L2HGDHQ9H9P8 463 aa5.44□□□□□ -1.54
VPS13D-213ENST00000613099 TRPC6Q9Y210 931 aa5.44□□□□□ -1.54
VPS13D-213ENST00000613099 UBN2Q6ZU65 1347 aa5.44□□□□□ -1.54
VPS13D-213ENST00000613099 OR8K1Q8NGG5 319 aa5.44□□□□□ -1.54
VPS13D-213ENST00000613099 ANKRD50Q9ULJ7 1429 aa5.44□□□□□ -1.54
VPS13D-213ENST00000613099 ANKRD65E5RJM6 399 aa5.44□□□□□ -1.54
VPS13D-213ENST00000613099 XPO1O14980 1071 aaKnown RBP5.44□□□□□ -1.54
VPS13D-213ENST00000613099 IL9RQ01113 521 aa5.44□□□□□ -1.54
VPS13D-213ENST00000613099 TBL3Q12788 808 aaKnown RBP5.44□□□□□ -1.54
VPS13D-213ENST00000613099 VWA3BQ502W6 1294 aa5.44□□□□□ -1.54
VPS13D-213ENST00000613099 SOGA3Q5TF21 947 aa5.44□□□□□ -1.54
VPS13D-213ENST00000613099 HELBQ8NG08 1087 aaPredicted RBP5.44□□□□□ -1.54
VPS13D-213ENST00000613099 VCPKMTQ9H867 229 aa5.44□□□□□ -1.54
VPS13D-213ENST00000613099 NOD2Q9HC29 1040 aa5.44□□□□□ -1.54
VPS13D-213ENST00000613099 CD248Q9HCU0 757 aa5.44□□□□□ -1.54
VPS13D-213ENST00000613099 C6orf203Q9P0P8 240 aaPredicted RBP5.44□□□□□ -1.54
VPS13D-213ENST00000613099 DDX58O95786 925 aaKnown RBP5.44□□□□□ -1.54
VPS13D-213ENST00000613099 STX2P32856 288 aa5.44□□□□□ -1.54
VPS13D-213ENST00000613099 RIPPLY1Q0D2K3 151 aa5.44□□□□□ -1.54
VPS13D-213ENST00000613099 SERPINA10Q9UK55 444 aa5.44□□□□□ -1.54
VPS13D-213ENST00000613099 CDK13Q14004 1512 aaKnown RBP5.44□□□□□ -1.54
VPS13D-213ENST00000613099 HS2ST1Q7LGA3 356 aa5.43□□□□□ -1.54
VPS13D-213ENST00000613099 PPP1R42Q7Z4L9 355 aa5.43□□□□□ -1.54
VPS13D-213ENST00000613099 RBM12BQ8IXT5 1001 aaKnown RBP5.43□□□□□ -1.54
VPS13D-213ENST00000613099 KIAA2013Q8IYS2 634 aa5.43□□□□□ -1.54
VPS13D-213ENST00000613099 HAUS4Q9H6D7 363 aa5.43□□□□□ -1.54
VPS13D-213ENST00000613099 INTS9Q9NV88 658 aaKnown RBP5.43□□□□□ -1.54
VPS13D-213ENST00000613099 EXOC5O00471 708 aa5.43□□□□□ -1.54
VPS13D-213ENST00000613099 KRT7P08729 469 aa5.43□□□□□ -1.54
VPS13D-213ENST00000613099 TMCO5AQ8N6Q1 288 aa5.43□□□□□ -1.54
VPS13D-213ENST00000613099 FAM167BQ9BTA0 163 aa5.43□□□□□ -1.54
VPS13D-213ENST00000613099 KRT23Q9C075 422 aa5.43□□□□□ -1.54
VPS13D-213ENST00000613099 LCA5LO95447 670 aa5.43□□□□□ -1.54
VPS13D-213ENST00000613099 MTTPP55157 894 aa5.43□□□□□ -1.54
VPS13D-213ENST00000613099 SNX1Q13596 522 aa5.43□□□□□ -1.54
VPS13D-213ENST00000613099 NVLO15381 856 aaKnown RBP5.43□□□□□ -1.54
VPS13D-213ENST00000613099 TRIM37O94972 964 aa5.43□□□□□ -1.54
VPS13D-213ENST00000613099 EEF1DP29692 281 aaKnown RBP5.43□□□□□ -1.54
VPS13D-213ENST00000613099 PLA2G4AP47712 749 aa5.43□□□□□ -1.54
VPS13D-213ENST00000613099 IQCB1Q15051 598 aa5.43□□□□□ -1.54
VPS13D-213ENST00000613099 ZNF280DQ6N043 979 aa5.43□□□□□ -1.54
VPS13D-213ENST00000613099 TMEM154Q6P9G4 183 aa5.43□□□□□ -1.54
VPS13D-213ENST00000613099 SH3GL2Q99962 352 aa5.43□□□□□ -1.54
VPS13D-213ENST00000613099 DIABLOQ9NR28 239 aa5.43□□□□□ -1.54
VPS13D-213ENST00000613099 NRBP1Q9UHY1 535 aa5.43□□□□□ -1.54
VPS13D-213ENST00000613099 NSD3Q9BZ95 1437 aa5.43□□□□□ -1.54
VPS13D-213ENST00000613099 POTEB3A0JP26 581 aa5.43□□□□□ -1.54
VPS13D-213ENST00000613099 CCT8L1PA6NM43 557 aa5.43□□□□□ -1.54
VPS13D-213ENST00000613099 RAD23BP54727 409 aa5.43□□□□□ -1.54
VPS13D-213ENST00000613099 POTEBQ6S5H4 581 aa5.43□□□□□ -1.54
VPS13D-213ENST00000613099 TRAPPC9Q96Q05 1148 aa5.43□□□□□ -1.54
VPS13D-213ENST00000613099 QRICH2Q9H0J4 1663 aa5.43□□□□□ -1.54
VPS13D-213ENST00000613099 CSB-PGBD3P0DP91 1061 aa5.43□□□□□ -1.54
VPS13D-213ENST00000613099 MLH1P40692 756 aa5.43□□□□□ -1.54
VPS13D-213ENST00000613099 NFE2L2Q16236 605 aa5.43□□□□□ -1.54
VPS13D-213ENST00000613099 TUBA3EQ6PEY2 450 aa5.43□□□□□ -1.54
VPS13D-213ENST00000613099 OGFOD1Q8N543 542 aa5.43□□□□□ -1.54
VPS13D-213ENST00000613099 CFAP61Q8NHU2 1237 aa5.43□□□□□ -1.54
VPS13D-213ENST00000613099 MYH2Q9UKX2 1941 aa5.43□□□□□ -1.54
VPS13D-213ENST00000613099 CCNHP51946 323 aaPredicted RBP5.43□□□□□ -1.54
VPS13D-213ENST00000613099 LRRC31Q6UY01 552 aa5.43□□□□□ -1.54
VPS13D-213ENST00000613099 CHD2O14647 1828 aaKnown RBP5.43□□□□□ -1.54
VPS13D-213ENST00000613099 YTHDF3Q7Z739 585 aaKnown RBP5.43□□□□□ -1.54
VPS13D-213ENST00000613099 PLEKHM2Q8IWE5 1019 aa5.43□□□□□ -1.54
VPS13D-213ENST00000613099 hCG_2014768A0A024R1R8 64 aa5.43□□□□□ -1.54
VPS13D-213ENST00000613099 SCYL3Q8IZE3 742 aa5.43□□□□□ -1.54
VPS13D-213ENST00000613099 FNBP4Q8N3X1 1017 aaPredicted RBP5.43□□□□□ -1.54
VPS13D-213ENST00000613099 NLRP7Q8WX94 980 aa5.43□□□□□ -1.54
VPS13D-213ENST00000613099 OATP04181 439 aa5.43□□□□□ -1.54
VPS13D-213ENST00000613099 KRT8P05787 483 aa5.43□□□□□ -1.54
VPS13D-213ENST00000613099 GNAT2P19087 354 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms