RNA–Protein interactions for RNA: ENST00000612927.1

PCDHGA4-202, Transcript of protocadherin gamma subfamily A, 4, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA4, Length 2,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4-202ENST00000612927 GRAMD1CQ8IYS0 662 aa14.36□□□□□ -0.11
PCDHGA4-202ENST00000612927 GPR161Q8N6U8 529 aaKnown RBP14.36□□□□□ -0.11
PCDHGA4-202ENST00000612927 PCDHA5Q9Y5H7 936 aa14.36□□□□□ -0.11
PCDHGA4-202ENST00000612927 DDAH1O94760 285 aa14.35□□□□□ -0.11
PCDHGA4-202ENST00000612927 CASQ1P31415 396 aa14.35□□□□□ -0.11
PCDHGA4-202ENST00000612927 AKAP17AQ02040 695 aaKnown RBP14.35□□□□□ -0.11
PCDHGA4-202ENST00000612927 PPP2R5BQ15173 497 aa14.35□□□□□ -0.11
PCDHGA4-202ENST00000612927 C12orf60Q5U649 245 aa14.35□□□□□ -0.11
PCDHGA4-202ENST00000612927 USP49Q70CQ1 688 aa14.35□□□□□ -0.11
PCDHGA4-202ENST00000612927 PDILTQ8N807 584 aa14.35□□□□□ -0.11
PCDHGA4-202ENST00000612927 POLLQ9UGP5 575 aa14.35□□□□□ -0.11
PCDHGA4-202ENST00000612927 TULP1O00294 542 aaPredicted RBP14.35□□□□□ -0.11
PCDHGA4-202ENST00000612927 BBOX1O75936 387 aa14.35□□□□□ -0.11
PCDHGA4-202ENST00000612927 PRR29P0C7W0 189 aa14.35□□□□□ -0.11
PCDHGA4-202ENST00000612927 PTPREP23469 700 aa14.35□□□□□ -0.11
PCDHGA4-202ENST00000612927 GSTO1P78417 241 aa14.35□□□□□ -0.11
PCDHGA4-202ENST00000612927 PDE4BQ07343 736 aa14.35□□□□□ -0.11
PCDHGA4-202ENST00000612927 PTPN21Q16825 1174 aa14.35□□□□□ -0.11
PCDHGA4-202ENST00000612927 ZNF827Q17R98 1081 aa14.35□□□□□ -0.11
PCDHGA4-202ENST00000612927 NOM1Q5C9Z4 860 aaKnown RBP14.35□□□□□ -0.11
PCDHGA4-202ENST00000612927 TRIM65Q6PJ69 517 aa14.35□□□□□ -0.11
PCDHGA4-202ENST00000612927 DYNLL2Q96FJ2 89 aa14.35□□□□□ -0.11
PCDHGA4-202ENST00000612927 V9GY48 417 aaPredicted RBP14.35□□□□□ -0.11
PCDHGA4-202ENST00000612927 WNT7AO00755 349 aa14.34□□□□□ -0.11
PCDHGA4-202ENST00000612927 POLR2DO15514 142 aaKnown RBP14.34□□□□□ -0.11
PCDHGA4-202ENST00000612927 IL1R1P14778 569 aa14.34□□□□□ -0.11
PCDHGA4-202ENST00000612927 BMP6P22004 513 aa14.34□□□□□ -0.11
PCDHGA4-202ENST00000612927 NOP2P46087 812 aaKnown RBP14.34□□□□□ -0.11
PCDHGA4-202ENST00000612927 TMTC3Q6ZXV5 915 aa14.34□□□□□ -0.11
PCDHGA4-202ENST00000612927 TBC1D16Q8TBP0 767 aa14.34□□□□□ -0.11
PCDHGA4-202ENST00000612927 RTFDC1Q9BY42 306 aaPredicted RBP14.34□□□□□ -0.11
PCDHGA4-202ENST00000612927 RBM28Q9NW13 759 aaKnown RBP14.34□□□□□ -0.11
PCDHGA4-202ENST00000612927 KLRG2A4D1S0 409 aaPredicted RBP14.34□□□□□ -0.11
PCDHGA4-202ENST00000612927 TSPY2A6NKD2 308 aa14.34□□□□□ -0.11
PCDHGA4-202ENST00000612927 PRPF3O43395 683 aaKnown RBP14.34□□□□□ -0.11
PCDHGA4-202ENST00000612927 SASH3O75995 380 aa14.34□□□□□ -0.11
PCDHGA4-202ENST00000612927 SEC31AO94979 1220 aaKnown RBP14.34□□□□□ -0.11
PCDHGA4-202ENST00000612927 CALM1P0DP23 149 aa14.34□□□□□ -0.11
PCDHGA4-202ENST00000612927 CALM2P0DP24 149 aa14.34□□□□□ -0.11
PCDHGA4-202ENST00000612927 CALM3P0DP25 149 aa14.34□□□□□ -0.11
PCDHGA4-202ENST00000612927 PPP4CP60510 307 aa14.34□□□□□ -0.11
PCDHGA4-202ENST00000612927 FANCCQ00597 558 aa14.34□□□□□ -0.11
PCDHGA4-202ENST00000612927 HSP90AA4PQ58FG1 418 aa14.34□□□□□ -0.11
PCDHGA4-202ENST00000612927 SRLQ86TD4 932 aa14.34□□□□□ -0.11
PCDHGA4-202ENST00000612927 TGFBRAP1Q8WUH2 860 aa14.34□□□□□ -0.11
PCDHGA4-202ENST00000612927 DPF2Q92785 391 aa14.34□□□□□ -0.11
PCDHGA4-202ENST00000612927 CRAMP1Q96RY5 1269 aa14.34□□□□□ -0.11
PCDHGA4-202ENST00000612927 PARP3Q9Y6F1 533 aa14.34□□□□□ -0.11
PCDHGA4-202ENST00000612927 MYH6P13533 1939 aa14.34□□□□□ -0.11
PCDHGA4-202ENST00000612927 BAZ2BQ9UIF8 2168 aaKnown RBP14.33□□□□□ -0.11
PCDHGA4-202ENST00000612927 CNTNAP5Q8WYK1 1306 aa14.33□□□□□ -0.11
PCDHGA4-202ENST00000612927 BAG3O95817 575 aa14.33□□□□□ -0.12
PCDHGA4-202ENST00000612927 JAKMIP3Q5VZ66 844 aa14.33□□□□□ -0.12
PCDHGA4-202ENST00000612927 RCSD1Q6JBY9 416 aa14.33□□□□□ -0.12
PCDHGA4-202ENST00000612927 CARD6Q9BX69 1037 aa14.33□□□□□ -0.12
PCDHGA4-202ENST00000612927 ARFGAP3Q9NP61 516 aa14.33□□□□□ -0.12
PCDHGA4-202ENST00000612927 SERTAD1Q9UHV2 236 aa14.33□□□□□ -0.12
PCDHGA4-202ENST00000612927 IKBKBO14920 756 aa14.33□□□□□ -0.12
PCDHGA4-202ENST00000612927 URI1O94763 535 aaPredicted RBP14.33□□□□□ -0.12
PCDHGA4-202ENST00000612927 MYL5Q02045 173 aa14.33□□□□□ -0.12
PCDHGA4-202ENST00000612927 CNPY4Q8N129 248 aa14.33□□□□□ -0.12
PCDHGA4-202ENST00000612927 GOLGA6L1Q8N7Z2 621 aa14.33□□□□□ -0.12
PCDHGA4-202ENST00000612927 CSRNP2Q9H175 543 aa14.33□□□□□ -0.12
PCDHGA4-202ENST00000612927 KCNG1Q9UIX4 513 aa14.33□□□□□ -0.12
PCDHGA4-202ENST00000612927 NAV1Q8NEY1 1877 aa14.33□□□□□ -0.12
PCDHGA4-202ENST00000612927 LTBP1Q14766 1721 aa14.32□□□□□ -0.12
PCDHGA4-202ENST00000612927 ROBO3Q96MS0 1386 aa14.32□□□□□ -0.12
PCDHGA4-202ENST00000612927 ZSCAN12O43309 604 aa14.32□□□□□ -0.12
PCDHGA4-202ENST00000612927 BTDP43251 543 aa14.32□□□□□ -0.12
PCDHGA4-202ENST00000612927 MDM2Q00987 491 aaPredicted RBP14.32□□□□□ -0.12
PCDHGA4-202ENST00000612927 POSTNQ15063 836 aa14.32□□□□□ -0.12
PCDHGA4-202ENST00000612927 MAPKAPK5Q8IW41 473 aa14.32□□□□□ -0.12
PCDHGA4-202ENST00000612927 REXO1L1PQ8IX06 675 aa14.32□□□□□ -0.12
PCDHGA4-202ENST00000612927 SRBD1Q8N5C6 995 aaKnown RBP14.32□□□□□ -0.12
PCDHGA4-202ENST00000612927 PHF20Q9BVI0 1012 aa14.32□□□□□ -0.12
PCDHGA4-202ENST00000612927 LRRC37AA6NMS7 1700 aa14.32□□□□□ -0.12
PCDHGA4-202ENST00000612927 ANKRD31Q8N7Z5 1873 aa14.32□□□□□ -0.12
PCDHGA4-202ENST00000612927 C6orf229H3BNL8 230 aa14.32□□□□□ -0.12
PCDHGA4-202ENST00000612927 PPEF1O14829 653 aaPredicted RBP14.32□□□□□ -0.12
PCDHGA4-202ENST00000612927 LDHCP07864 332 aa14.32□□□□□ -0.12
PCDHGA4-202ENST00000612927 KRT2P35908 639 aa14.32□□□□□ -0.12
PCDHGA4-202ENST00000612927 TFAP4Q01664 338 aa14.32□□□□□ -0.12
PCDHGA4-202ENST00000612927 SLC44A5Q8NCS7 719 aa14.32□□□□□ -0.12
PCDHGA4-202ENST00000612927 IL17RBQ9NRM6 502 aa14.32□□□□□ -0.12
PCDHGA4-202ENST00000612927 SAP30BPQ9UHR5 308 aaKnown RBP14.32□□□□□ -0.12
PCDHGA4-202ENST00000612927 MAN1B1Q9UKM7 699 aa14.32□□□□□ -0.12
PCDHGA4-202ENST00000612927 IVLP07476 585 aa14.31□□□□□ -0.12
PCDHGA4-202ENST00000612927 COL23A1Q86Y22 540 aaPredicted RBP14.31□□□□□ -0.12
PCDHGA4-202ENST00000612927 C10orf67Q8IYJ2 551 aa14.31□□□□□ -0.12
PCDHGA4-202ENST00000612927 CTCFLQ8NI51 663 aaPredicted RBP14.31□□□□□ -0.12
PCDHGA4-202ENST00000612927 TMX1Q9H3N1 280 aa14.31□□□□□ -0.12
PCDHGA4-202ENST00000612927 FANCLQ9NW38 375 aa14.31□□□□□ -0.12
PCDHGA4-202ENST00000612927 SRPRBQ9Y5M8 271 aaKnown RBP14.31□□□□□ -0.12
PCDHGA4-202ENST00000612927 GOLGA6L9A6NEM1 432 aa14.31□□□□□ -0.12
PCDHGA4-202ENST00000612927 VEGFAP15692 232 aaPredicted RBP14.31□□□□□ -0.12
PCDHGA4-202ENST00000612927 XBP1P17861 261 aa14.31□□□□□ -0.12
PCDHGA4-202ENST00000612927 ACTN2P35609 894 aa14.31□□□□□ -0.12
PCDHGA4-202ENST00000612927 PLCD1P51178 756 aa14.31□□□□□ -0.12
PCDHGA4-202ENST00000612927 MFSD14BQ5SR56 506 aa14.31□□□□□ -0.12
PCDHGA4-202ENST00000612927 OLFM4Q6UX06 510 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms