RNA–Protein interactions for RNA: ENST00000612223.4

SYNRG-217, Transcript of synergin gamma, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNRG, Length 8,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-217ENST00000612223 NT5C3AQ9H0P0 336 aa15.9■□□□□ 0.14
SYNRG-217ENST00000612223 NEURL1BA8MQ27 555 aa15.89■□□□□ 0.13
SYNRG-217ENST00000612223 GDF11O95390 407 aa15.89■□□□□ 0.13
SYNRG-217ENST00000612223 PPARDQ03181 441 aa15.89■□□□□ 0.13
SYNRG-217ENST00000612223 DTNBO60941 627 aa15.89■□□□□ 0.13
SYNRG-217ENST00000612223 CUTAO60888 179 aa15.89■□□□□ 0.13
SYNRG-217ENST00000612223 CIB2O75838 187 aa15.89■□□□□ 0.13
SYNRG-217ENST00000612223 CCDC93Q567U6 631 aa15.89■□□□□ 0.13
SYNRG-217ENST00000612223 RSAD2Q8WXG1 361 aa15.89■□□□□ 0.13
SYNRG-217ENST00000612223 KDM3AQ9Y4C1 1321 aa15.89■□□□□ 0.13
SYNRG-217ENST00000612223 USP14P54578 494 aa15.89■□□□□ 0.13
SYNRG-217ENST00000612223 KLHL30Q0D2K2 578 aa15.89■□□□□ 0.13
SYNRG-217ENST00000612223 C2orf69Q8N8R5 385 aa15.89■□□□□ 0.13
SYNRG-217ENST00000612223 ACTN4O43707 911 aaKnown RBP15.89■□□□□ 0.13
SYNRG-217ENST00000612223 MUM1L1Q5H9M0 696 aa15.89■□□□□ 0.13
SYNRG-217ENST00000612223 CHMP6Q96FZ7 201 aa15.89■□□□□ 0.13
SYNRG-217ENST00000612223 BABAM1Q9NWV8 329 aa15.89■□□□□ 0.13
SYNRG-217ENST00000612223 IWS1Q96ST2 819 aa15.89■□□□□ 0.13
SYNRG-217ENST00000612223 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.89■□□□□ 0.13
SYNRG-217ENST00000612223 DDX25Q9UHL0 483 aaKnown RBP15.89■□□□□ 0.13
SYNRG-217ENST00000612223 RLBP1P12271 317 aa15.88■□□□□ 0.13
SYNRG-217ENST00000612223 KRT40Q6A162 431 aa15.88■□□□□ 0.13
SYNRG-217ENST00000612223 KCNQ3O43525 872 aa15.88■□□□□ 0.13
SYNRG-217ENST00000612223 INTS8Q75QN2 995 aaKnown RBP15.88■□□□□ 0.13
SYNRG-217ENST00000612223 ZBTB38Q8NAP3 1195 aaPredicted RBP15.88■□□□□ 0.13
SYNRG-217ENST00000612223 CEP104O60308 925 aa15.88■□□□□ 0.13
SYNRG-217ENST00000612223 FAM160A1Q05DH4 1040 aa15.88■□□□□ 0.13
SYNRG-217ENST00000612223 TAOK1Q7L7X3 1001 aa15.88■□□□□ 0.13
SYNRG-217ENST00000612223 POLIQ9UNA4 740 aa15.88■□□□□ 0.13
SYNRG-217ENST00000612223 MYL3P08590 195 aa15.88■□□□□ 0.13
SYNRG-217ENST00000612223 EIF4A1P60842 406 aaKnown RBP15.88■□□□□ 0.13
SYNRG-217ENST00000612223 TBC1D10BQ4KMP7 808 aaPredicted RBP15.88■□□□□ 0.13
SYNRG-217ENST00000612223 CYP26C1Q6V0L0 522 aa15.88■□□□□ 0.13
SYNRG-217ENST00000612223 GPKOWQ92917 476 aaPredicted RBP eCLIP15.88■□□□□ 0.13
SYNRG-217ENST00000612223 ZNF277Q9NRM2 450 aaPredicted RBP15.88■□□□□ 0.13
SYNRG-217ENST00000612223 POLR3AO14802 1390 aaPredicted RBP15.88■□□□□ 0.13
SYNRG-217ENST00000612223 HOXB7P09629 217 aa15.88■□□□□ 0.13
SYNRG-217ENST00000612223 OTUD7AQ8TE49 926 aaPredicted RBP15.88■□□□□ 0.13
SYNRG-217ENST00000612223 XDHP47989 1333 aa15.88■□□□□ 0.13
SYNRG-217ENST00000612223 FYB2Q5VWT5 728 aa15.88■□□□□ 0.13
SYNRG-217ENST00000612223 PCDHA12Q9UN75 941 aa15.88■□□□□ 0.13
SYNRG-217ENST00000612223 NLRP7Q8WX94 980 aa15.88■□□□□ 0.13
SYNRG-217ENST00000612223 LSM14BQ9BX40 385 aaKnown RBP15.88■□□□□ 0.13
SYNRG-217ENST00000612223 DISC1Q9NRI5 854 aa15.88■□□□□ 0.13
SYNRG-217ENST00000612223 TTC36A6NLP5 189 aa15.87■□□□□ 0.13
SYNRG-217ENST00000612223 CCDC105Q8IYK2 499 aa15.87■□□□□ 0.13
SYNRG-217ENST00000612223 SDCCAG8Q86SQ7 713 aaPredicted RBP15.87■□□□□ 0.13
SYNRG-217ENST00000612223 SEPT12Q8IYM1 358 aa15.87■□□□□ 0.13
SYNRG-217ENST00000612223 ZNF654Q8IZM8 581 aa15.87■□□□□ 0.13
SYNRG-217ENST00000612223 SFMBT2Q5VUG0 894 aa15.87■□□□□ 0.13
SYNRG-217ENST00000612223 RSRC2Q7L4I2 434 aaKnown RBP15.87■□□□□ 0.13
SYNRG-217ENST00000612223 SLFN12Q8IYM2 578 aa15.87■□□□□ 0.13
SYNRG-217ENST00000612223 LMCD1Q9NZU5 365 aa15.87■□□□□ 0.13
SYNRG-217ENST00000612223 SNX14Q9Y5W7 946 aa15.87■□□□□ 0.13
SYNRG-217ENST00000612223 EDC4Q6P2E9 1401 aaKnown RBP15.87■□□□□ 0.13
SYNRG-217ENST00000612223 KLRF2D3W0D1 207 aa15.87■□□□□ 0.13
SYNRG-217ENST00000612223 WDR46O15213 610 aaKnown RBP15.87■□□□□ 0.13
SYNRG-217ENST00000612223 ATL3Q6DD88 541 aa15.87■□□□□ 0.13
SYNRG-217ENST00000612223 KLHL7Q8IXQ5 586 aa15.87■□□□□ 0.13
SYNRG-217ENST00000612223 RETREG2Q8NC44 543 aa15.87■□□□□ 0.13
SYNRG-217ENST00000612223 ASAP1Q9ULH1 1129 aa15.87■□□□□ 0.13
SYNRG-217ENST00000612223 HPDP32754 393 aaPredicted RBP15.87■□□□□ 0.13
SYNRG-217ENST00000612223 PIK3CAP42336 1068 aa15.87■□□□□ 0.13
SYNRG-217ENST00000612223 COL17A1Q9UMD9 1497 aaPredicted RBP15.87■□□□□ 0.13
SYNRG-217ENST00000612223 TBC1D8O95759 1140 aa15.87■□□□□ 0.13
SYNRG-217ENST00000612223 TRIM14Q14142 442 aa15.86■□□□□ 0.13
SYNRG-217ENST00000612223 NOLC1Q14978 699 aaKnown RBP eCLIP15.86■□□□□ 0.13
SYNRG-217ENST00000612223 ARMCX5Q6P1M9 558 aa15.86■□□□□ 0.13
SYNRG-217ENST00000612223 IFNL3Q8IZI9 196 aa15.86■□□□□ 0.13
SYNRG-217ENST00000612223 PNMA1Q8ND90 353 aa15.86■□□□□ 0.13
SYNRG-217ENST00000612223 U2AF1L4Q8WU68 220 aaKnown RBP15.86■□□□□ 0.13
SYNRG-217ENST00000612223 PSMB7Q99436 277 aa15.86■□□□□ 0.13
SYNRG-217ENST00000612223 NLRC4Q9NPP4 1024 aa15.86■□□□□ 0.13
SYNRG-217ENST00000612223 FNDC3AQ9Y2H6 1198 aaKnown RBP15.86■□□□□ 0.13
SYNRG-217ENST00000612223 USP26Q9BXU7 913 aa15.86■□□□□ 0.13
SYNRG-217ENST00000612223 VPS37BQ9H9H4 285 aa15.86■□□□□ 0.13
SYNRG-217ENST00000612223 ZBTB40Q9NUA8 1239 aa15.86■□□□□ 0.13
SYNRG-217ENST00000612223 SPDYE2BA6NHP3 402 aa15.86■□□□□ 0.13
SYNRG-217ENST00000612223 HGSO14964 777 aaPredicted RBP15.86■□□□□ 0.13
SYNRG-217ENST00000612223 SPDYE6P0CI01 402 aa15.86■□□□□ 0.13
SYNRG-217ENST00000612223 SAT1P21673 171 aa15.86■□□□□ 0.13
SYNRG-217ENST00000612223 PPP2R5BQ15173 497 aa15.86■□□□□ 0.13
SYNRG-217ENST00000612223 KCTD1Q719H9 257 aa15.86■□□□□ 0.13
SYNRG-217ENST00000612223 CCDC127Q96BQ5 260 aa15.86■□□□□ 0.13
SYNRG-217ENST00000612223 EDC3Q96F86 508 aaKnown RBP15.86■□□□□ 0.13
SYNRG-217ENST00000612223 C1orf112Q9NSG2 853 aa15.86■□□□□ 0.13
SYNRG-217ENST00000612223 RAB20Q9NX57 234 aa15.86■□□□□ 0.13
SYNRG-217ENST00000612223 SLC4A1P02730 911 aa15.86■□□□□ 0.13
SYNRG-217ENST00000612223 LACTBP83111 547 aaPredicted RBP15.86■□□□□ 0.13
SYNRG-217ENST00000612223 CIAPIN1Q6FI81 312 aa15.86■□□□□ 0.13
SYNRG-217ENST00000612223 PANK4Q9NVE7 773 aa15.86■□□□□ 0.13
SYNRG-217ENST00000612223 E7EWF7 191 aa15.86■□□□□ 0.13
SYNRG-217ENST00000612223 LGSNQ5TDP6 509 aa15.86■□□□□ 0.13
SYNRG-217ENST00000612223 GCNAQ96QF7 691 aa15.86■□□□□ 0.13
SYNRG-217ENST00000612223 NUP58Q9BVL2 599 aa15.86■□□□□ 0.13
SYNRG-217ENST00000612223 VPS18Q9P253 973 aa15.86■□□□□ 0.13
SYNRG-217ENST00000612223 ELF1P32519 619 aa15.85■□□□□ 0.13
SYNRG-217ENST00000612223 TAB3Q8N5C8 712 aaPredicted RBP15.85■□□□□ 0.13
SYNRG-217ENST00000612223 CALCOCO1Q9P1Z2 691 aa15.85■□□□□ 0.13
SYNRG-217ENST00000612223 PNMA6EA0A0J9YXQ4 647 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms