RNA–Protein interactions for RNA: ENST00000611067.4

SEMA3B-210, Transcript of semaphorin 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEMA3B, Length 2,292 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-210ENST00000611067 SPECC1Q5M775 1068 aa21.6■■□□□ 1.05
SEMA3B-210ENST00000611067 RAD9BQ6WBX8 426 aa21.6■■□□□ 1.05
SEMA3B-210ENST00000611067 RRP15Q9Y3B9 282 aaKnown RBP21.6■■□□□ 1.05
SEMA3B-210ENST00000611067 LRRC37AA6NMS7 1700 aa21.6■■□□□ 1.05
SEMA3B-210ENST00000611067 TRIM66O15016 1216 aa21.59■■□□□ 1.05
SEMA3B-210ENST00000611067 RPS6KA5O75582 802 aa21.59■■□□□ 1.05
SEMA3B-210ENST00000611067 ERCC5P28715 1186 aaPredicted RBP21.59■■□□□ 1.05
SEMA3B-210ENST00000611067 MAPK8IP2Q13387 824 aaPredicted RBP21.59■■□□□ 1.05
SEMA3B-210ENST00000611067 SPTY2D1Q68D10 685 aaPredicted RBP21.59■■□□□ 1.05
SEMA3B-210ENST00000611067 ADGRA1Q86SQ6 560 aa21.59■■□□□ 1.05
SEMA3B-210ENST00000611067 SP8Q8IXZ3 490 aa21.59■■□□□ 1.05
SEMA3B-210ENST00000611067 GPR101Q96P66 508 aaPredicted RBP21.59■■□□□ 1.05
SEMA3B-210ENST00000611067 PNKPQ96T60 521 aa21.59■■□□□ 1.05
SEMA3B-210ENST00000611067 SERTAD1Q9UHV2 236 aa21.59■■□□□ 1.05
SEMA3B-210ENST00000611067 POLR2DO15514 142 aaKnown RBP21.59■■□□□ 1.05
SEMA3B-210ENST00000611067 PTPREP23469 700 aa21.59■■□□□ 1.05
SEMA3B-210ENST00000611067 TDO2P48775 406 aa21.59■■□□□ 1.05
SEMA3B-210ENST00000611067 PLCD1P51178 756 aa21.59■■□□□ 1.05
SEMA3B-210ENST00000611067 MICU3Q86XE3 530 aa21.59■■□□□ 1.05
SEMA3B-210ENST00000611067 WDR66Q8TBY9 1149 aa21.59■■□□□ 1.05
SEMA3B-210ENST00000611067 EFCC1Q9HA90 598 aa21.59■■□□□ 1.05
SEMA3B-210ENST00000611067 EPB41L4AQ9HCS5 686 aaPredicted RBP21.59■■□□□ 1.05
SEMA3B-210ENST00000611067 RSPH14Q9UHP6 348 aa21.59■■□□□ 1.05
SEMA3B-210ENST00000611067 QSER1Q2KHR3 1735 aa21.59■■□□□ 1.05
SEMA3B-210ENST00000611067 GSG1L2A8MUP6 293 aa21.58■■□□□ 1.05
SEMA3B-210ENST00000611067 ZBTB43O43298 467 aa21.58■■□□□ 1.05
SEMA3B-210ENST00000611067 RANBP6O60518 1105 aaKnown RBP21.58■■□□□ 1.05
SEMA3B-210ENST00000611067 TNNT3P45378 269 aaPredicted RBP21.58■■□□□ 1.05
SEMA3B-210ENST00000611067 RASGRP2Q7LDG7 609 aa21.58■■□□□ 1.05
SEMA3B-210ENST00000611067 NOSTRINQ8IVI9 506 aa21.58■■□□□ 1.05
SEMA3B-210ENST00000611067 NSUN4Q96CB9 384 aaKnown RBP21.58■■□□□ 1.05
SEMA3B-210ENST00000611067 MASTLQ96GX5 879 aa21.58■■□□□ 1.05
SEMA3B-210ENST00000611067 TMEM87BQ96K49 555 aa21.58■■□□□ 1.05
SEMA3B-210ENST00000611067 FBXO2Q9UK22 296 aaPredicted RBP21.58■■□□□ 1.05
SEMA3B-210ENST00000611067 CCDC88AQ3V6T2 1871 aa21.58■■□□□ 1.05
SEMA3B-210ENST00000611067 STK36Q9NRP7 1315 aa21.58■■□□□ 1.04
SEMA3B-210ENST00000611067 MECOMQ03112 1051 aa21.58■■□□□ 1.04
SEMA3B-210ENST00000611067 KANK3Q6NY19 840 aa21.58■■□□□ 1.04
SEMA3B-210ENST00000611067 TMED8Q6PL24 325 aaPredicted RBP21.58■■□□□ 1.04
SEMA3B-210ENST00000611067 PPFIBP1Q86W92 1011 aa21.58■■□□□ 1.04
SEMA3B-210ENST00000611067 TBC1D10CQ8IV04 446 aa21.58■■□□□ 1.04
SEMA3B-210ENST00000611067 SPATA20Q8TB22 786 aa21.58■■□□□ 1.04
SEMA3B-210ENST00000611067 TMX4Q9H1E5 349 aaPredicted RBP21.58■■□□□ 1.04
SEMA3B-210ENST00000611067 ABCB6Q9NP58 842 aa21.58■■□□□ 1.04
SEMA3B-210ENST00000611067 TAOK2Q9UL54 1235 aa21.58■■□□□ 1.04
SEMA3B-210ENST00000611067 JAG2Q9Y219 1238 aa21.58■■□□□ 1.04
SEMA3B-210ENST00000611067 ATP6V0A2Q9Y487 856 aa21.58■■□□□ 1.04
SEMA3B-210ENST00000611067 MAST2Q6P0Q8 1798 aa21.57■■□□□ 1.04
SEMA3B-210ENST00000611067 C6orf229H3BNL8 230 aa21.57■■□□□ 1.04
SEMA3B-210ENST00000611067 PRKAB2O43741 272 aa21.57■■□□□ 1.04
SEMA3B-210ENST00000611067 PRDX5P30044 214 aa21.57■■□□□ 1.04
SEMA3B-210ENST00000611067 PDE4CQ08493 712 aa21.57■■□□□ 1.04
SEMA3B-210ENST00000611067 CT47A1Q5JQC4 288 aaPredicted RBP21.57■■□□□ 1.04
SEMA3B-210ENST00000611067 APTXQ7Z2E3 356 aaKnown RBP21.57■■□□□ 1.04
SEMA3B-210ENST00000611067 NKX2-3Q8TAU0 364 aa21.57■■□□□ 1.04
SEMA3B-210ENST00000611067 TBC1D16Q8TBP0 767 aa21.57■■□□□ 1.04
SEMA3B-210ENST00000611067 COL11A2P13942 1736 aaPredicted RBP21.57■■□□□ 1.04
SEMA3B-210ENST00000611067 TEX33O43247 280 aa21.57■■□□□ 1.04
SEMA3B-210ENST00000611067 RBL2Q08999 1139 aa21.57■■□□□ 1.04
SEMA3B-210ENST00000611067 ZNF569Q5MCW4 686 aa21.57■■□□□ 1.04
SEMA3B-210ENST00000611067 DZIP1Q86YF9 867 aaKnown RBP21.57■■□□□ 1.04
SEMA3B-210ENST00000611067 IGSF22Q8N9C0 903 aa21.57■■□□□ 1.04
SEMA3B-210ENST00000611067 ZNF579Q8NAF0 562 aaKnown RBP21.57■■□□□ 1.04
SEMA3B-210ENST00000611067 FAM217BQ9NTX9 383 aaPredicted RBP21.57■■□□□ 1.04
SEMA3B-210ENST00000611067 CTAGE9A4FU28 777 aa21.56■■□□□ 1.04
SEMA3B-210ENST00000611067 GOLGA8AA7E2F4 631 aa21.56■■□□□ 1.04
SEMA3B-210ENST00000611067 TUBBP07437 444 aa21.56■■□□□ 1.04
SEMA3B-210ENST00000611067 PBX1P40424 430 aa21.56■■□□□ 1.04
SEMA3B-210ENST00000611067 TOB1P50616 345 aaPredicted RBP21.56■■□□□ 1.04
SEMA3B-210ENST00000611067 GRIN1Q05586 938 aa21.56■■□□□ 1.04
SEMA3B-210ENST00000611067 KIF4BQ2VIQ3 1234 aa21.56■■□□□ 1.04
SEMA3B-210ENST00000611067 SGMS1Q86VZ5 419 aa21.56■■□□□ 1.04
SEMA3B-210ENST00000611067 IGDCC4Q8TDY8 1250 aa21.56■■□□□ 1.04
SEMA3B-210ENST00000611067 GBP3Q9H0R5 595 aa21.56■■□□□ 1.04
SEMA3B-210ENST00000611067 SENP2Q9HC62 589 aa21.56■■□□□ 1.04
SEMA3B-210ENST00000611067 POLLQ9UGP5 575 aa21.56■■□□□ 1.04
SEMA3B-210ENST00000611067 RIOK1Q9BRS2 568 aaKnown RBP21.55■■□□□ 1.04
SEMA3B-210ENST00000611067 A0A0U1RQJ8 604 aa21.55■■□□□ 1.04
SEMA3B-210ENST00000611067 SSRP1Q08945 709 aaKnown RBP21.55■■□□□ 1.04
SEMA3B-210ENST00000611067 DEFB132Q7Z7B7 95 aa21.55■■□□□ 1.04
SEMA3B-210ENST00000611067 ZNF384Q8TF68 577 aa21.55■■□□□ 1.04
SEMA3B-210ENST00000611067 ATRIPQ8WXE1 791 aa21.55■■□□□ 1.04
SEMA3B-210ENST00000611067 WASF1Q92558 559 aa21.55■■□□□ 1.04
SEMA3B-210ENST00000611067 CD209Q9NNX6 404 aa21.55■■□□□ 1.04
SEMA3B-210ENST00000611067 TTF2Q9UNY4 1162 aaKnown RBP21.55■■□□□ 1.04
SEMA3B-210ENST00000611067 FAN1Q9Y2M0 1017 aa21.55■■□□□ 1.04
SEMA3B-210ENST00000611067 LTBP1Q14766 1721 aa21.54■■□□□ 1.04
SEMA3B-210ENST00000611067 ACTN4O43707 911 aaKnown RBP21.54■■□□□ 1.04
SEMA3B-210ENST00000611067 N4BP1O75113 896 aaKnown RBP21.54■■□□□ 1.04
SEMA3B-210ENST00000611067 LDHBP07195 334 aaKnown RBP21.54■■□□□ 1.04
SEMA3B-210ENST00000611067 RILPL1Q5EBL4 403 aa21.54■■□□□ 1.04
SEMA3B-210ENST00000611067 FAM71BQ8TC56 605 aa21.54■■□□□ 1.04
SEMA3B-210ENST00000611067 ZNF622Q969S3 477 aaKnown RBP eCLIP21.54■■□□□ 1.04
SEMA3B-210ENST00000611067 SLC26A6Q9BXS9 759 aa21.54■■□□□ 1.04
SEMA3B-210ENST00000611067 LY9Q9HBG7 655 aa21.54■■□□□ 1.04
SEMA3B-210ENST00000611067 BTBD18B2RXH4 712 aa21.54■■□□□ 1.04
SEMA3B-210ENST00000611067 B4E1Z4 1266 aa21.54■■□□□ 1.04
SEMA3B-210ENST00000611067 MFAP3LO75121 409 aa21.54■■□□□ 1.04
SEMA3B-210ENST00000611067 FMNL1O95466 1100 aaPredicted RBP21.54■■□□□ 1.04
SEMA3B-210ENST00000611067 MMP1P03956 469 aa21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms