RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 B4DLN1 442 aa23■■□□□ 1.27
SSBP3-216ENST00000610401 BRINP3Q76B58 766 aa23■■□□□ 1.27
SSBP3-216ENST00000610401 IQUBQ8NA54 791 aa23■■□□□ 1.27
SSBP3-216ENST00000610401 PLA2G12BQ9BX93 195 aa23■■□□□ 1.27
SSBP3-216ENST00000610401 RNF41Q9H4P4 317 aaPredicted RBP23■■□□□ 1.27
SSBP3-216ENST00000610401 FAM204AQ9H8W3 233 aa23■■□□□ 1.27
SSBP3-216ENST00000610401 CXCR5P32302 372 aa22.99■■□□□ 1.27
SSBP3-216ENST00000610401 ATP2B2Q01814 1243 aa22.99■■□□□ 1.27
SSBP3-216ENST00000610401 BRD3Q15059 726 aa22.99■■□□□ 1.27
SSBP3-216ENST00000610401 ANKRD20A12PQ8NF67 263 aa22.99■■□□□ 1.27
SSBP3-216ENST00000610401 EPN1Q9Y6I3 576 aaPredicted RBP22.99■■□□□ 1.27
SSBP3-216ENST00000610401 FGFR2P21802 821 aa22.99■■□□□ 1.27
SSBP3-216ENST00000610401 CDKAL1Q5VV42 579 aa22.99■■□□□ 1.27
SSBP3-216ENST00000610401 ANKRD13CQ8N6S4 541 aa22.99■■□□□ 1.27
SSBP3-216ENST00000610401 KLRK1P26718 216 aa22.99■■□□□ 1.27
SSBP3-216ENST00000610401 TCP11X2Q5H9J9 407 aa22.99■■□□□ 1.27
SSBP3-216ENST00000610401 CTCFLQ8NI51 663 aaPredicted RBP22.99■■□□□ 1.27
SSBP3-216ENST00000610401 CTAGE1Q96RT6 745 aa22.99■■□□□ 1.27
SSBP3-216ENST00000610401 PHF20Q9BVI0 1012 aa22.99■■□□□ 1.27
SSBP3-216ENST00000610401 L1RE1Q9UN81 338 aa22.99■■□□□ 1.27
SSBP3-216ENST00000610401 USP54Q70EL1 1684 aa22.98■■□□□ 1.27
SSBP3-216ENST00000610401 ARHGAP25P42331 645 aa22.98■■□□□ 1.27
SSBP3-216ENST00000610401 ENOX2Q16206 610 aaKnown RBP22.98■■□□□ 1.27
SSBP3-216ENST00000610401 TSR1Q2NL82 804 aaKnown RBP22.98■■□□□ 1.27
SSBP3-216ENST00000610401 CYP26C1Q6V0L0 522 aa22.98■■□□□ 1.27
SSBP3-216ENST00000610401 KRT26Q7Z3Y9 468 aa22.98■■□□□ 1.27
SSBP3-216ENST00000610401 SLC51AQ86UW1 340 aa22.98■■□□□ 1.27
SSBP3-216ENST00000610401 GOLGA8HP0CJ92 632 aa22.98■■□□□ 1.27
SSBP3-216ENST00000610401 TRIM21P19474 475 aaKnown RBP22.98■■□□□ 1.27
SSBP3-216ENST00000610401 ZNF579Q8NAF0 562 aaKnown RBP22.98■■□□□ 1.27
SSBP3-216ENST00000610401 GSDMAQ96QA5 445 aa22.98■■□□□ 1.27
SSBP3-216ENST00000610401 TSPY2A6NKD2 308 aa22.97■■□□□ 1.27
SSBP3-216ENST00000610401 ALX1Q15699 326 aa22.97■■□□□ 1.27
SSBP3-216ENST00000610401 SPATA20Q8TB22 786 aa22.97■■□□□ 1.27
SSBP3-216ENST00000610401 RNF26Q9BY78 433 aaPredicted RBP22.97■■□□□ 1.27
SSBP3-216ENST00000610401 UBXN6Q9BZV1 441 aa22.97■■□□□ 1.27
SSBP3-216ENST00000610401 NDUFA10O95299 355 aa22.97■■□□□ 1.27
SSBP3-216ENST00000610401 RPN1P04843 607 aaKnown RBP22.97■■□□□ 1.27
SSBP3-216ENST00000610401 PARP1P09874 1014 aaKnown RBP22.97■■□□□ 1.27
SSBP3-216ENST00000610401 SEC23AQ15436 765 aa22.97■■□□□ 1.27
SSBP3-216ENST00000610401 TMTC2Q8N394 836 aa22.97■■□□□ 1.27
SSBP3-216ENST00000610401 REXO2Q9Y3B8 237 aaKnown RBP22.97■■□□□ 1.27
SSBP3-216ENST00000610401 MROH5Q6ZUA9 1318 aa22.97■■□□□ 1.27
SSBP3-216ENST00000610401 CCDC178Q5BJE1 867 aa22.97■■□□□ 1.27
SSBP3-216ENST00000610401 VAT1LQ9HCJ6 419 aa22.97■■□□□ 1.27
SSBP3-216ENST00000610401 TTF2Q9UNY4 1162 aaKnown RBP22.97■■□□□ 1.27
SSBP3-216ENST00000610401 LUC7L2Q9Y383 392 aaKnown RBP22.97■■□□□ 1.27
SSBP3-216ENST00000610401 EIF3JO75822 258 aaKnown RBP22.96■■□□□ 1.27
SSBP3-216ENST00000610401 ACTN2P35609 894 aa22.96■■□□□ 1.27
SSBP3-216ENST00000610401 C2orf54Q08AI8 447 aa22.96■■□□□ 1.27
SSBP3-216ENST00000610401 TMTC1Q8IUR5 882 aa22.96■■□□□ 1.27
SSBP3-216ENST00000610401 LACRTQ9GZZ8 138 aa22.96■■□□□ 1.27
SSBP3-216ENST00000610401 EHD2Q9NZN4 543 aa22.96■■□□□ 1.27
SSBP3-216ENST00000610401 RRP15Q9Y3B9 282 aaKnown RBP22.96■■□□□ 1.27
SSBP3-216ENST00000610401 MAP2K7O14733 419 aa22.96■■□□□ 1.27
SSBP3-216ENST00000610401 TNS3Q68CZ2 1445 aa22.96■■□□□ 1.27
SSBP3-216ENST00000610401 C4AP0C0L4 1744 aa22.96■■□□□ 1.27
SSBP3-216ENST00000610401 C4BP0C0L5 1744 aa22.96■■□□□ 1.27
SSBP3-216ENST00000610401 RCCD1A6NED2 376 aa22.95■■□□□ 1.27
SSBP3-216ENST00000610401 PBX1P40424 430 aa22.95■■□□□ 1.27
SSBP3-216ENST00000610401 SLC7A5Q01650 507 aa22.95■■□□□ 1.27
SSBP3-216ENST00000610401 STAG2Q8N3U4 1231 aa22.95■■□□□ 1.27
SSBP3-216ENST00000610401 CAMTA1Q9Y6Y1 1673 aa22.95■■□□□ 1.26
SSBP3-216ENST00000610401 MYO1BO43795 1136 aa22.95■■□□□ 1.26
SSBP3-216ENST00000610401 INF2Q27J81 1249 aa22.95■■□□□ 1.26
SSBP3-216ENST00000610401 CCDC148Q8NFR7 591 aa22.95■■□□□ 1.26
SSBP3-216ENST00000610401 CARD10Q9BWT7 1032 aa22.95■■□□□ 1.26
SSBP3-216ENST00000610401 PLEKP08567 350 aaPredicted RBP22.95■■□□□ 1.26
SSBP3-216ENST00000610401 C3orf67Q6ZVT6 689 aa22.95■■□□□ 1.26
SSBP3-216ENST00000610401 MST1RQ04912 1400 aa22.95■■□□□ 1.26
SSBP3-216ENST00000610401 MYBL2P10244 700 aa22.94■■□□□ 1.26
SSBP3-216ENST00000610401 TROAPQ12815 778 aa22.94■■□□□ 1.26
SSBP3-216ENST00000610401 HEATR3Q7Z4Q2 680 aa22.94■■□□□ 1.26
SSBP3-216ENST00000610401 EHD4Q9H223 541 aa22.94■■□□□ 1.26
SSBP3-216ENST00000610401 FAM205AQ6ZU69 1335 aa22.94■■□□□ 1.26
SSBP3-216ENST00000610401 TJP1Q07157 1748 aa22.94■■□□□ 1.26
SSBP3-216ENST00000610401 MYH8P13535 1937 aa22.94■■□□□ 1.26
SSBP3-216ENST00000610401 RNF40O75150 1001 aa22.94■■□□□ 1.26
SSBP3-216ENST00000610401 RNASE9P60153 205 aaKnown RBP22.94■■□□□ 1.26
SSBP3-216ENST00000610401 EZH2Q15910 746 aaKnown RBP22.94■■□□□ 1.26
SSBP3-216ENST00000610401 DYNLL2Q96FJ2 89 aa22.94■■□□□ 1.26
SSBP3-216ENST00000610401 KCPQ6ZWJ8 1503 aa22.93■■□□□ 1.26
SSBP3-216ENST00000610401 ATP8B1O43520 1251 aa22.93■■□□□ 1.26
SSBP3-216ENST00000610401 GOLGA6L1Q8N7Z2 621 aa22.93■■□□□ 1.26
SSBP3-216ENST00000610401 EXOC4Q96A65 974 aa22.93■■□□□ 1.26
SSBP3-216ENST00000610401 TMEM60Q9H2L4 133 aa22.93■■□□□ 1.26
SSBP3-216ENST00000610401 RASSF4Q9H2L5 321 aa22.93■■□□□ 1.26
SSBP3-216ENST00000610401 TULP2O00295 520 aa22.93■■□□□ 1.26
SSBP3-216ENST00000610401 ATP6V1AP38606 617 aa22.93■■□□□ 1.26
SSBP3-216ENST00000610401 PTPROQ16827 1216 aa22.93■■□□□ 1.26
SSBP3-216ENST00000610401 NAA15Q9BXJ9 866 aaKnown RBP22.93■■□□□ 1.26
SSBP3-216ENST00000610401 NPY5RQ15761 445 aa22.93■■□□□ 1.26
SSBP3-216ENST00000610401 SH3RF1Q7Z6J0 888 aa22.93■■□□□ 1.26
SSBP3-216ENST00000610401 CWC15Q9P013 229 aaKnown RBP22.93■■□□□ 1.26
SSBP3-216ENST00000610401 STX8Q9UNK0 236 aa22.93■■□□□ 1.26
SSBP3-216ENST00000610401 AKAP11Q9UKA4 1901 aa22.92■■□□□ 1.26
SSBP3-216ENST00000610401 CDHR2Q9BYE9 1310 aa22.92■■□□□ 1.26
SSBP3-216ENST00000610401 GNAT2P19087 354 aa22.92■■□□□ 1.26
SSBP3-216ENST00000610401 FERMT2Q96AC1 680 aa22.92■■□□□ 1.26
SSBP3-216ENST00000610401 PRDX5P30044 214 aa22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 156.7 ms