RNA–Protein interactions for RNA: ENST00000609021.1

HDDC2-208, Transcript of HD domain containing 2, humanhuman

Gene HDDC2, Length 3,529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-208ENST00000609021 CLMNQ96JQ2 1002 aa5.27□□□□□ -1.57
HDDC2-208ENST00000609021 TRIM5Q9C035 493 aa5.27□□□□□ -1.57
HDDC2-208ENST00000609021 PFDN4Q9NQP4 134 aa5.27□□□□□ -1.57
HDDC2-208ENST00000609021 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.27□□□□□ -1.57
HDDC2-208ENST00000609021 KCTD5Q9NXV2 234 aa5.27□□□□□ -1.57
HDDC2-208ENST00000609021 ATXN10Q9UBB4 475 aa5.27□□□□□ -1.57
HDDC2-208ENST00000609021 DDX20Q9UHI6 824 aaKnown RBP5.27□□□□□ -1.57
HDDC2-208ENST00000609021 GTF3C4Q9UKN8 822 aa5.27□□□□□ -1.57
HDDC2-208ENST00000609021 TMA7Q9Y2S6 64 aaKnown RBP5.27□□□□□ -1.57
HDDC2-208ENST00000609021 CCDC7Q96M83 1385 aa5.27□□□□□ -1.57
HDDC2-208ENST00000609021 STRCQ7RTU9 1775 aa5.26□□□□□ -1.57
HDDC2-208ENST00000609021 K7ELQ4 463 aaPredicted RBP5.26□□□□□ -1.57
HDDC2-208ENST00000609021 GIGYF1O75420 1035 aaPredicted RBP5.26□□□□□ -1.57
HDDC2-208ENST00000609021 PRKAR2BP31323 418 aa5.26□□□□□ -1.57
HDDC2-208ENST00000609021 PDE6CP51160 858 aa5.26□□□□□ -1.57
HDDC2-208ENST00000609021 ISM2Q6H9L7 571 aa5.26□□□□□ -1.57
HDDC2-208ENST00000609021 APLFQ8IW19 511 aaPredicted RBP5.26□□□□□ -1.57
HDDC2-208ENST00000609021 CKAP2LQ8IYA6 745 aa5.26□□□□□ -1.57
HDDC2-208ENST00000609021 FAM9CQ8IZT9 166 aa5.26□□□□□ -1.57
HDDC2-208ENST00000609021 ZNF713Q8N859 430 aaPredicted RBP5.26□□□□□ -1.57
HDDC2-208ENST00000609021 RBM46Q8TBY0 533 aaKnown RBP5.26□□□□□ -1.57
HDDC2-208ENST00000609021 AFAP1L1Q8TED9 768 aa5.26□□□□□ -1.57
HDDC2-208ENST00000609021 ZWILCHQ9H900 591 aa5.26□□□□□ -1.57
HDDC2-208ENST00000609021 PARVBQ9HBI1 364 aa5.26□□□□□ -1.57
HDDC2-208ENST00000609021 SLC5A4Q9NY91 659 aa5.26□□□□□ -1.57
HDDC2-208ENST00000609021 RABGAP1Q9Y3P9 1069 aa5.26□□□□□ -1.57
HDDC2-208ENST00000609021 ZFYVE9O95405 1425 aa5.26□□□□□ -1.57
HDDC2-208ENST00000609021 ADGRB2O60241 1585 aa5.26□□□□□ -1.57
HDDC2-208ENST00000609021 MON2Q7Z3U7 1717 aa5.26□□□□□ -1.57
HDDC2-208ENST00000609021 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.26□□□□□ -1.57
HDDC2-208ENST00000609021 TSPAN9O75954 239 aa5.26□□□□□ -1.57
HDDC2-208ENST00000609021 TUBB4AP04350 444 aa5.26□□□□□ -1.57
HDDC2-208ENST00000609021 CYP1A2P05177 515 aa5.26□□□□□ -1.57
HDDC2-208ENST00000609021 CNGA1P29973 690 aa5.26□□□□□ -1.57
HDDC2-208ENST00000609021 CTCFP49711 727 aaPredicted RBP5.26□□□□□ -1.57
HDDC2-208ENST00000609021 OXCT1P55809 520 aa5.26□□□□□ -1.57
HDDC2-208ENST00000609021 CCDC153Q494R4 210 aa5.26□□□□□ -1.57
HDDC2-208ENST00000609021 PLPP6Q8IY26 295 aa5.26□□□□□ -1.57
HDDC2-208ENST00000609021 HELQQ8TDG4 1101 aa5.26□□□□□ -1.57
HDDC2-208ENST00000609021 GIPC2Q8TF65 315 aa5.26□□□□□ -1.57
HDDC2-208ENST00000609021 MRPL46Q9H2W6 279 aaKnown RBP5.26□□□□□ -1.57
HDDC2-208ENST00000609021 ANO10Q9NW15 660 aa5.26□□□□□ -1.57
HDDC2-208ENST00000609021 SUCLA2Q9P2R7 463 aaPredicted RBP5.26□□□□□ -1.57
HDDC2-208ENST00000609021 ATPIF1Q9UII2 106 aa5.26□□□□□ -1.57
HDDC2-208ENST00000609021 SBNO2Q9Y2G9 1366 aa5.26□□□□□ -1.57
HDDC2-208ENST00000609021 ERVK-7P63135 1459 aa5.26□□□□□ -1.57
HDDC2-208ENST00000609021 PITPNM1O00562 1244 aa5.26□□□□□ -1.57
HDDC2-208ENST00000609021 TACC1O75410 805 aa5.26□□□□□ -1.57
HDDC2-208ENST00000609021 HCLS1P14317 486 aaPredicted RBP5.26□□□□□ -1.57
HDDC2-208ENST00000609021 S100A5P33763 92 aa5.26□□□□□ -1.57
HDDC2-208ENST00000609021 RASSF7Q02833 373 aa5.26□□□□□ -1.57
HDDC2-208ENST00000609021 SAFBQ15424 915 aaKnown RBP eCLIP5.26□□□□□ -1.57
HDDC2-208ENST00000609021 CREB3L3Q68CJ9 461 aa5.26□□□□□ -1.57
HDDC2-208ENST00000609021 ADALQ6DHV7 355 aa5.26□□□□□ -1.57
HDDC2-208ENST00000609021 DSTYKQ6XUX3 929 aa5.26□□□□□ -1.57
HDDC2-208ENST00000609021 KRT27Q7Z3Y8 459 aa5.26□□□□□ -1.57
HDDC2-208ENST00000609021 CCDC144CPQ8IYA2 1237 aa5.26□□□□□ -1.57
HDDC2-208ENST00000609021 BCAS4Q8TDM0 211 aa5.26□□□□□ -1.57
HDDC2-208ENST00000609021 UQCC2Q9BRT2 126 aa5.26□□□□□ -1.57
HDDC2-208ENST00000609021 SIL1Q9H173 461 aa5.26□□□□□ -1.57
HDDC2-208ENST00000609021 PREBQ9HCU5 417 aa5.26□□□□□ -1.57
HDDC2-208ENST00000609021 TMCO1Q9UM00 188 aa5.26□□□□□ -1.57
HDDC2-208ENST00000609021 GMEB1Q9Y692 573 aa5.26□□□□□ -1.57
HDDC2-208ENST00000609021 CCDC144AA2RUR9 1427 aa5.25□□□□□ -1.57
HDDC2-208ENST00000609021 PIK3C2GO75747 1445 aa5.25□□□□□ -1.57
HDDC2-208ENST00000609021 TMEM221A6NGB7 291 aa5.25□□□□□ -1.57
HDDC2-208ENST00000609021 PDLIM1O00151 329 aa5.25□□□□□ -1.57
HDDC2-208ENST00000609021 TTI1O43156 1089 aa5.25□□□□□ -1.57
HDDC2-208ENST00000609021 APOEP02649 317 aa5.25□□□□□ -1.57
HDDC2-208ENST00000609021 TCF3P15923 654 aa5.25□□□□□ -1.57
HDDC2-208ENST00000609021 MYO1EQ12965 1108 aa5.25□□□□□ -1.57
HDDC2-208ENST00000609021 PTPROQ16827 1216 aa5.25□□□□□ -1.57
HDDC2-208ENST00000609021 NEK5Q6P3R8 708 aa5.25□□□□□ -1.57
HDDC2-208ENST00000609021 BARGINQ6ZT62 677 aa5.25□□□□□ -1.57
HDDC2-208ENST00000609021 TAOK1Q7L7X3 1001 aa5.25□□□□□ -1.57
HDDC2-208ENST00000609021 DPH6Q7L8W6 267 aa5.25□□□□□ -1.57
HDDC2-208ENST00000609021 NLRP9Q7RTR0 991 aa5.25□□□□□ -1.57
HDDC2-208ENST00000609021 ARL6IP6Q8N6S5 226 aa5.25□□□□□ -1.57
HDDC2-208ENST00000609021 NSMCE1Q8WV22 266 aa5.25□□□□□ -1.57
HDDC2-208ENST00000609021 CASP10Q92851 521 aa5.25□□□□□ -1.57
HDDC2-208ENST00000609021 MPHOSPH9Q99550 1183 aa5.25□□□□□ -1.57
HDDC2-208ENST00000609021 VCXQ9H320 206 aa5.25□□□□□ -1.57
HDDC2-208ENST00000609021 PDE11AQ9HCR9 933 aa5.25□□□□□ -1.57
HDDC2-208ENST00000609021 STK39Q9UEW8 545 aa5.25□□□□□ -1.57
HDDC2-208ENST00000609021 ZNF711Q9Y462 761 aa5.25□□□□□ -1.57
HDDC2-208ENST00000609021 H0YC42 278 aa5.25□□□□□ -1.57
HDDC2-208ENST00000609021 MUSKO15146 869 aa5.25□□□□□ -1.57
HDDC2-208ENST00000609021 BBOX1O75936 387 aa5.25□□□□□ -1.57
HDDC2-208ENST00000609021 STAMBPO95630 424 aa5.25□□□□□ -1.57
HDDC2-208ENST00000609021 SLC16A2P36021 539 aa5.25□□□□□ -1.57
HDDC2-208ENST00000609021 ITGB3BPQ13352 177 aaPredicted RBP5.25□□□□□ -1.57
HDDC2-208ENST00000609021 SNW1Q13573 536 aaKnown RBP5.25□□□□□ -1.57
HDDC2-208ENST00000609021 BOLA3Q53S33 107 aa5.25□□□□□ -1.57
HDDC2-208ENST00000609021 TMEM53Q6P2H8 277 aa5.25□□□□□ -1.57
HDDC2-208ENST00000609021 BZW1Q7L1Q6 419 aaKnown RBP5.25□□□□□ -1.57
HDDC2-208ENST00000609021 BRSK2Q8IWQ3 736 aa5.25□□□□□ -1.57
HDDC2-208ENST00000609021 GALNT6Q8NCL4 622 aa5.25□□□□□ -1.57
HDDC2-208ENST00000609021 ANKK1Q8NFD2 765 aa5.25□□□□□ -1.57
HDDC2-208ENST00000609021 FAM71BQ8TC56 605 aa5.25□□□□□ -1.57
HDDC2-208ENST00000609021 GFM2Q969S9 779 aaKnown RBP5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms