RNA–Protein interactions for RNA: ENST00000608945.1

ITGB5-213, Transcript of integrin subunit beta 5, humanhuman

TSL 2

Gene ITGB5, Length 267 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB5-213ENST00000608945 MKNK1Q9BUB5 465 aa3.47□□□□□ -1.85
ITGB5-213ENST00000608945 CXXC1Q9P0U4 656 aaPredicted RBP3.47□□□□□ -1.85
ITGB5-213ENST00000608945 ZNF281Q9Y2X9 895 aa3.47□□□□□ -1.85
ITGB5-213ENST00000608945 MUSKO15146 869 aa3.46□□□□□ -1.86
ITGB5-213ENST00000608945 TEKQ02763 1124 aa3.46□□□□□ -1.86
ITGB5-213ENST00000608945 FAAP100Q0VG06 881 aa3.46□□□□□ -1.86
ITGB5-213ENST00000608945 OCLNQ16625 522 aa3.46□□□□□ -1.86
ITGB5-213ENST00000608945 C8orf34Q49A92 452 aa3.46□□□□□ -1.86
ITGB5-213ENST00000608945 KCNB2Q92953 911 aa3.46□□□□□ -1.86
ITGB5-213ENST00000608945 PPP4R1LQ9P1A2 415 aa3.46□□□□□ -1.86
ITGB5-213ENST00000608945 TESMINQ9Y4I5 508 aa3.46□□□□□ -1.86
ITGB5-213ENST00000608945 ZNF536O15090 1300 aa3.45□□□□□ -1.86
ITGB5-213ENST00000608945 GPR42O15529 346 aa3.45□□□□□ -1.86
ITGB5-213ENST00000608945 PDGFAP04085 211 aa3.45□□□□□ -1.86
ITGB5-213ENST00000608945 POLR3DP05423 398 aaPredicted RBP3.45□□□□□ -1.86
ITGB5-213ENST00000608945 LTKP29376 864 aa3.45□□□□□ -1.86
ITGB5-213ENST00000608945 FOXO4P98177 505 aa3.45□□□□□ -1.86
ITGB5-213ENST00000608945 LETMD1Q6P1Q0 360 aa3.45□□□□□ -1.86
ITGB5-213ENST00000608945 TSPYL5Q86VY4 417 aaPredicted RBP3.45□□□□□ -1.86
ITGB5-213ENST00000608945 ABTB2Q8N961 1025 aa3.45□□□□□ -1.86
ITGB5-213ENST00000608945 SNX29Q8TEQ0 813 aa3.45□□□□□ -1.86
ITGB5-213ENST00000608945 PLCD4Q9BRC7 762 aa3.45□□□□□ -1.86
ITGB5-213ENST00000608945 AMOTL2Q9Y2J4 779 aa3.45□□□□□ -1.86
ITGB5-213ENST00000608945 DMRT1Q9Y5R6 373 aa3.45□□□□□ -1.86
ITGB5-213ENST00000608945 SERINC4A6NH21 518 aa3.44□□□□□ -1.86
ITGB5-213ENST00000608945 TMEM88BA6NKF7 163 aa3.44□□□□□ -1.86
ITGB5-213ENST00000608945 COL10A1Q03692 680 aa3.44□□□□□ -1.86
ITGB5-213ENST00000608945 SLBPQ14493 270 aaKnown RBP eCLIP3.44□□□□□ -1.86
ITGB5-213ENST00000608945 NAA30Q147X3 362 aaPredicted RBP3.44□□□□□ -1.86
ITGB5-213ENST00000608945 GRM7Q14831 915 aa3.44□□□□□ -1.86
ITGB5-213ENST00000608945 RETREG2Q8NC44 543 aa3.44□□□□□ -1.86
ITGB5-213ENST00000608945 STK35Q8TDR2 534 aa3.44□□□□□ -1.86
ITGB5-213ENST00000608945 WASF1Q92558 559 aa3.44□□□□□ -1.86
ITGB5-213ENST00000608945 FBRSQ9HAH7 460 aa3.44□□□□□ -1.86
ITGB5-213ENST00000608945 PLA2G2DQ9UNK4 145 aa3.44□□□□□ -1.86
ITGB5-213ENST00000608945 ATF2P15336 505 aa3.43□□□□□ -1.86
ITGB5-213ENST00000608945 PFKLP17858 780 aa3.43□□□□□ -1.86
ITGB5-213ENST00000608945 SSFA2P28290 1259 aa3.43□□□□□ -1.86
ITGB5-213ENST00000608945 MCM7P33993 719 aa3.43□□□□□ -1.86
ITGB5-213ENST00000608945 ZNF200P98182 395 aaPredicted RBP3.43□□□□□ -1.86
ITGB5-213ENST00000608945 HNRNPUQ00839 825 aaKnown RBP eCLIP3.43□□□□□ -1.86
ITGB5-213ENST00000608945 KIR3DS1Q14943 382 aa3.43□□□□□ -1.86
ITGB5-213ENST00000608945 GRASPQ7Z6J2 395 aaPredicted RBP3.43□□□□□ -1.86
ITGB5-213ENST00000608945 TTC16Q8NEE8 873 aa3.43□□□□□ -1.86
ITGB5-213ENST00000608945 GPBAR1Q8TDU6 330 aa3.43□□□□□ -1.86
ITGB5-213ENST00000608945 NEU4Q8WWR8 484 aaPredicted RBP3.43□□□□□ -1.86
ITGB5-213ENST00000608945 DEF6Q9H4E7 631 aa3.43□□□□□ -1.86
ITGB5-213ENST00000608945 DCDC2CA8MYV0 355 aa3.42□□□□□ -1.86
ITGB5-213ENST00000608945 FANCGO15287 622 aa3.42□□□□□ -1.86
ITGB5-213ENST00000608945 MPOP05164 745 aa3.42□□□□□ -1.86
ITGB5-213ENST00000608945 PCSK2P16519 638 aa3.42□□□□□ -1.86
ITGB5-213ENST00000608945 RAB3GAP1Q15042 981 aa3.42□□□□□ -1.86
ITGB5-213ENST00000608945 COLEC12Q5KU26 742 aa3.42□□□□□ -1.86
ITGB5-213ENST00000608945 CDC37L1Q7L3B6 337 aa3.42□□□□□ -1.86
ITGB5-213ENST00000608945 C12orf40Q86WS4 652 aa3.42□□□□□ -1.86
ITGB5-213ENST00000608945 HELQQ8TDG4 1101 aa3.42□□□□□ -1.86
ITGB5-213ENST00000608945 COX4I2Q96KJ9 171 aa3.42□□□□□ -1.86
ITGB5-213ENST00000608945 TRIT1Q9H3H1 467 aaKnown RBP3.42□□□□□ -1.86
ITGB5-213ENST00000608945 NUDT19A8MXV4 375 aa3.41□□□□□ -1.86
ITGB5-213ENST00000608945 ABL1P00519 1130 aa3.41□□□□□ -1.86
ITGB5-213ENST00000608945 DNM1Q05193 864 aaKnown RBP3.41□□□□□ -1.86
ITGB5-213ENST00000608945 SF3B2Q13435 895 aaKnown RBP3.41□□□□□ -1.86
ITGB5-213ENST00000608945 AAMPQ13685 434 aa3.41□□□□□ -1.86
ITGB5-213ENST00000608945 NKG7Q16617 165 aa3.41□□□□□ -1.86
ITGB5-213ENST00000608945 ALKBH2Q6NS38 261 aa3.41□□□□□ -1.86
ITGB5-213ENST00000608945 ZNF746Q6NUN9 644 aaPredicted RBP3.41□□□□□ -1.86
ITGB5-213ENST00000608945 GTF3C2Q8WUA4 911 aaPredicted RBP3.41□□□□□ -1.86
ITGB5-213ENST00000608945 GPR62Q9BZJ7 368 aa3.41□□□□□ -1.86
ITGB5-213ENST00000608945 CACNA2D2Q9NY47 1150 aa3.41□□□□□ -1.86
ITGB5-213ENST00000608945 CARNS1A5YM72 827 aa3.4□□□□□ -1.87
ITGB5-213ENST00000608945 FAM13AO94988 1023 aa3.4□□□□□ -1.87
ITGB5-213ENST00000608945 SARSP49591 514 aaKnown RBP3.4□□□□□ -1.87
ITGB5-213ENST00000608945 CBX2Q14781 532 aaPredicted RBP3.4□□□□□ -1.87
ITGB5-213ENST00000608945 PLEKHN1Q494U1 663 aaPredicted RBP3.4□□□□□ -1.87
ITGB5-213ENST00000608945 NOM1Q5C9Z4 860 aaKnown RBP3.4□□□□□ -1.87
ITGB5-213ENST00000608945 RPTNQ6XPR3 784 aa3.4□□□□□ -1.87
ITGB5-213ENST00000608945 RNF207Q6ZRF8 634 aa3.4□□□□□ -1.87
ITGB5-213ENST00000608945 LGI4Q8N135 537 aa3.4□□□□□ -1.87
ITGB5-213ENST00000608945 KCT2Q8NC54 265 aa3.4□□□□□ -1.87
ITGB5-213ENST00000608945 ADAMTS17Q8TE56 1095 aa3.4□□□□□ -1.87
ITGB5-213ENST00000608945 SLAIN2Q9P270 581 aa3.4□□□□□ -1.87
ITGB5-213ENST00000608945 SEPT3Q9UH03 358 aa3.4□□□□□ -1.87
ITGB5-213ENST00000608945 PATL2C9JE40 543 aaKnown RBP3.39□□□□□ -1.87
ITGB5-213ENST00000608945 BRD1O95696 1058 aa3.39□□□□□ -1.87
ITGB5-213ENST00000608945 MPRIPQ6WCQ1 1025 aa3.39□□□□□ -1.87
ITGB5-213ENST00000608945 GLYCTKQ8IVS8 523 aa3.39□□□□□ -1.87
ITGB5-213ENST00000608945 MFSD2AQ8NA29 543 aa3.39□□□□□ -1.87
ITGB5-213ENST00000608945 SYTL4Q96C24 671 aaPredicted RBP3.39□□□□□ -1.87
ITGB5-213ENST00000608945 SPATA6Q9NWH7 488 aaPredicted RBP3.39□□□□□ -1.87
ITGB5-213ENST00000608945 EGFL7Q9UHF1 273 aa3.39□□□□□ -1.87
ITGB5-213ENST00000608945 PDIA4P13667 645 aaKnown RBP3.38□□□□□ -1.87
ITGB5-213ENST00000608945 MPSTP25325 297 aa3.38□□□□□ -1.87
ITGB5-213ENST00000608945 USP5P45974 858 aa3.38□□□□□ -1.87
ITGB5-213ENST00000608945 FKBP4Q02790 459 aaKnown RBP eCLIP3.38□□□□□ -1.87
ITGB5-213ENST00000608945 ZNF211Q13398 564 aaPredicted RBP3.38□□□□□ -1.87
ITGB5-213ENST00000608945 CDH24Q86UP0 819 aa3.38□□□□□ -1.87
ITGB5-213ENST00000608945 ZFYVE28Q9HCC9 887 aa3.38□□□□□ -1.87
ITGB5-213ENST00000608945 PICK1Q9NRD5 415 aa3.38□□□□□ -1.87
ITGB5-213ENST00000608945 GPATCH2Q9NW75 528 aa3.38□□□□□ -1.87
ITGB5-213ENST00000608945 TCAF1Q9Y4C2 921 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms