RNA–Protein interactions for RNA: ENST00000608621.5

POLR2J3-219, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 4

Gene POLR2J3, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-219ENST00000608621 GOPCQ9HD26 462 aa16.06■□□□□ 0.16
POLR2J3-219ENST00000608621 ADAMTS5Q9UNA0 930 aa16.06■□□□□ 0.16
POLR2J3-219ENST00000608621 ZNFX1Q9P2E3 1918 aaKnown RBP16.06■□□□□ 0.16
POLR2J3-219ENST00000608621 SEPT4O43236 478 aa16.05■□□□□ 0.16
POLR2J3-219ENST00000608621 SLC25A27O95847 323 aa16.05■□□□□ 0.16
POLR2J3-219ENST00000608621 SBK1Q52WX2 424 aa16.05■□□□□ 0.16
POLR2J3-219ENST00000608621 KBTBD3Q8NAB2 608 aa16.05■□□□□ 0.16
POLR2J3-219ENST00000608621 OSBP2Q969R2 916 aa16.05■□□□□ 0.16
POLR2J3-219ENST00000608621 MAML3Q96JK9 1138 aa16.05■□□□□ 0.16
POLR2J3-219ENST00000608621 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.05■□□□□ 0.16
POLR2J3-219ENST00000608621 ARPP21Q9UBL0 812 aaPredicted RBP16.05■□□□□ 0.16
POLR2J3-219ENST00000608621 A0A0G2JMZ2 1700 aa16.05■□□□□ 0.16
POLR2J3-219ENST00000608621 MINDY4BA8MYZ0 360 aa16.04■□□□□ 0.16
POLR2J3-219ENST00000608621 STAT3P40763 770 aa16.04■□□□□ 0.16
POLR2J3-219ENST00000608621 FAM83BQ5T0W9 1011 aa16.04■□□□□ 0.16
POLR2J3-219ENST00000608621 GPR153Q6NV75 609 aa16.04■□□□□ 0.16
POLR2J3-219ENST00000608621 RIOX2Q8IUF8 465 aa16.04■□□□□ 0.16
POLR2J3-219ENST00000608621 MKNK2Q9HBH9 465 aa16.04■□□□□ 0.16
POLR2J3-219ENST00000608621 ZNF236Q9UL36 1845 aa16.03■□□□□ 0.16
POLR2J3-219ENST00000608621 KBTBD13C9JR72 458 aa16.03■□□□□ 0.16
POLR2J3-219ENST00000608621 VWA5AO00534 786 aa16.03■□□□□ 0.16
POLR2J3-219ENST00000608621 RNF113AO15541 343 aaKnown RBP16.03■□□□□ 0.16
POLR2J3-219ENST00000608621 MYCNP04198 464 aaPredicted RBP16.03■□□□□ 0.16
POLR2J3-219ENST00000608621 RASA1P20936 1047 aa16.03■□□□□ 0.16
POLR2J3-219ENST00000608621 RTP1P59025 263 aa16.03■□□□□ 0.16
POLR2J3-219ENST00000608621 TSHZ3Q63HK5 1081 aa16.03■□□□□ 0.16
POLR2J3-219ENST00000608621 GIMAP6Q6P9H5 292 aa16.03■□□□□ 0.16
POLR2J3-219ENST00000608621 SLC39A5Q6ZMH5 540 aa16.03■□□□□ 0.16
POLR2J3-219ENST00000608621 Q7L0L9 218 aa16.03■□□□□ 0.16
POLR2J3-219ENST00000608621 DEFB123Q8N688 67 aa16.03■□□□□ 0.16
POLR2J3-219ENST00000608621 SLC17A8Q8NDX2 589 aa16.03■□□□□ 0.16
POLR2J3-219ENST00000608621 APPBP2Q92624 585 aa16.03■□□□□ 0.16
POLR2J3-219ENST00000608621 GPATCH3Q96I76 525 aa16.03■□□□□ 0.16
POLR2J3-219ENST00000608621 MMP19Q99542 508 aa16.03■□□□□ 0.16
POLR2J3-219ENST00000608621 LBHD1Q9BQE6 289 aaPredicted RBP16.03■□□□□ 0.16
POLR2J3-219ENST00000608621 PPP1R9AQ9ULJ8 1098 aa16.03■□□□□ 0.16
POLR2J3-219ENST00000608621 SMCHD1A6NHR9 2005 aa16.02■□□□□ 0.16
POLR2J3-219ENST00000608621 PGK2P07205 417 aa16.02■□□□□ 0.16
POLR2J3-219ENST00000608621 REPS2Q8NFH8 660 aa16.02■□□□□ 0.16
POLR2J3-219ENST00000608621 NUP88Q99567 741 aaPredicted RBP16.02■□□□□ 0.16
POLR2J3-219ENST00000608621 NYAP2Q9P242 653 aa16.02■□□□□ 0.16
POLR2J3-219ENST00000608621 ATP11BQ9Y2G3 1177 aa16.02■□□□□ 0.16
POLR2J3-219ENST00000608621 COL11A1P12107 1806 aaPredicted RBP16.02■□□□□ 0.16
POLR2J3-219ENST00000608621 PARP14Q460N5 1801 aa16.02■□□□□ 0.16
POLR2J3-219ENST00000608621 F5H6K3 240 aa16.01■□□□□ 0.15
POLR2J3-219ENST00000608621 GPAA1O43292 621 aa16.01■□□□□ 0.15
POLR2J3-219ENST00000608621 ADCYAP1R1P41586 468 aa16.01■□□□□ 0.15
POLR2J3-219ENST00000608621 KLRC3Q07444 240 aa16.01■□□□□ 0.15
POLR2J3-219ENST00000608621 KCTD2Q14681 263 aa16.01■□□□□ 0.15
POLR2J3-219ENST00000608621 LRRC41Q15345 812 aa16.01■□□□□ 0.15
POLR2J3-219ENST00000608621 ZNF792Q3KQV3 632 aa16.01■□□□□ 0.15
POLR2J3-219ENST00000608621 TINF2Q9BSI4 451 aa16.01■□□□□ 0.15
POLR2J3-219ENST00000608621 CLIP2Q9UDT6 1046 aa16.01■□□□□ 0.15
POLR2J3-219ENST00000608621 PRKAG2Q9UGJ0 569 aa16.01■□□□□ 0.15
POLR2J3-219ENST00000608621 ZNF214Q9UL59 606 aaPredicted RBP16.01■□□□□ 0.15
POLR2J3-219ENST00000608621 LAMA3Q16787 3333 aa16.01■□□□□ 0.15
POLR2J3-219ENST00000608621 M0R2C6 588 aa16■□□□□ 0.15
POLR2J3-219ENST00000608621 APPP05067 770 aa16■□□□□ 0.15
POLR2J3-219ENST00000608621 ZFYP08048 801 aaPredicted RBP16■□□□□ 0.15
POLR2J3-219ENST00000608621 FAM47AQ5JRC9 791 aa16■□□□□ 0.15
POLR2J3-219ENST00000608621 ZNF444Q8N0Y2 327 aaPredicted RBP16■□□□□ 0.15
POLR2J3-219ENST00000608621 FERMT2Q96AC1 680 aa16■□□□□ 0.15
POLR2J3-219ENST00000608621 SLF1Q9BQI6 1058 aa16■□□□□ 0.15
POLR2J3-219ENST00000608621 EPB41L4AQ9HCS5 686 aaPredicted RBP16■□□□□ 0.15
POLR2J3-219ENST00000608621 DIS3Q9Y2L1 958 aaKnown RBP16■□□□□ 0.15
POLR2J3-219ENST00000608621 DNAH12Q6ZR08 3092 aa16■□□□□ 0.15
POLR2J3-219ENST00000608621 PATL2C9JE40 543 aaKnown RBP15.99■□□□□ 0.15
POLR2J3-219ENST00000608621 PRDM1O75626 825 aa15.99■□□□□ 0.15
POLR2J3-219ENST00000608621 TAL1P17542 331 aaPredicted RBP15.99■□□□□ 0.15
POLR2J3-219ENST00000608621 GNAT2P19087 354 aa15.99■□□□□ 0.15
POLR2J3-219ENST00000608621 COPB2P35606 906 aa15.99■□□□□ 0.15
POLR2J3-219ENST00000608621 TDO2P48775 406 aa15.99■□□□□ 0.15
POLR2J3-219ENST00000608621 IFNL3Q8IZI9 196 aa15.99■□□□□ 0.15
POLR2J3-219ENST00000608621 MTMR10Q9NXD2 777 aa15.99■□□□□ 0.15
POLR2J3-219ENST00000608621 NRBP1Q9UHY1 535 aa15.99■□□□□ 0.15
POLR2J3-219ENST00000608621 IGKV6D-41A0A0C4DH26 115 aa15.98■□□□□ 0.15
POLR2J3-219ENST00000608621 NDUFB10O96000 172 aa15.98■□□□□ 0.15
POLR2J3-219ENST00000608621 RARBP10826 455 aa15.98■□□□□ 0.15
POLR2J3-219ENST00000608621 SLC4A3P48751 1232 aa15.98■□□□□ 0.15
POLR2J3-219ENST00000608621 PRPF38AQ8NAV1 312 aaKnown RBP15.98■□□□□ 0.15
POLR2J3-219ENST00000608621 MKL1Q969V6 931 aa15.98■□□□□ 0.15
POLR2J3-219ENST00000608621 SEC62Q99442 399 aaKnown RBP15.98■□□□□ 0.15
POLR2J3-219ENST00000608621 ZNF287Q9HBT7 754 aa15.98■□□□□ 0.15
POLR2J3-219ENST00000608621 XPNPEP3Q9NQH7 507 aa15.98■□□□□ 0.15
POLR2J3-219ENST00000608621 RIPK3Q9Y572 518 aa15.98■□□□□ 0.15
POLR2J3-219ENST00000608621 ROBO3Q96MS0 1386 aa15.98■□□□□ 0.15
POLR2J3-219ENST00000608621 GREB1LQ9C091 1923 aaPredicted RBP15.98■□□□□ 0.15
POLR2J3-219ENST00000608621 ZBED4O75132 1171 aa15.97■□□□□ 0.15
POLR2J3-219ENST00000608621 PGK1P00558 417 aa15.97■□□□□ 0.15
POLR2J3-219ENST00000608621 ZNF865P0CJ78 1059 aaPredicted RBP15.97■□□□□ 0.15
POLR2J3-219ENST00000608621 SNX17Q15036 470 aa15.97■□□□□ 0.15
POLR2J3-219ENST00000608621 LRRFIP1Q32MZ4 808 aaKnown RBP15.97■□□□□ 0.15
POLR2J3-219ENST00000608621 TRIM60Q495X7 471 aa15.97■□□□□ 0.15
POLR2J3-219ENST00000608621 SNRNP48Q6IEG0 339 aaKnown RBP15.97■□□□□ 0.15
POLR2J3-219ENST00000608621 CPXCR1Q8N123 301 aa15.97■□□□□ 0.15
POLR2J3-219ENST00000608621 DDX11Q96FC9 970 aa15.97■□□□□ 0.15
POLR2J3-219ENST00000608621 TEX13BQ9BXU2 312 aa15.97■□□□□ 0.15
POLR2J3-219ENST00000608621 PRDM5Q9NQX1 630 aaPredicted RBP15.97■□□□□ 0.15
POLR2J3-219ENST00000608621 PCDHB15Q9Y5E8 787 aa15.97■□□□□ 0.15
POLR2J3-219ENST00000608621 PLXNA1Q9UIW2 1896 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms