RNA–Protein interactions for RNA: ENST00000607814.5

CTSA-218, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-218ENST00000607814 ERC2O15083 957 aa16.33■□□□□ 0.2
CTSA-218ENST00000607814 STRNO43815 780 aa16.33■□□□□ 0.2
CTSA-218ENST00000607814 CYP2C19P33261 490 aa16.33■□□□□ 0.2
CTSA-218ENST00000607814 TATDN1Q6P1N9 297 aa16.33■□□□□ 0.2
CTSA-218ENST00000607814 SMC5Q8IY18 1101 aa16.33■□□□□ 0.2
CTSA-218ENST00000607814 MPHOSPH10O00566 681 aaKnown RBP16.32■□□□□ 0.2
CTSA-218ENST00000607814 FOSL2P15408 326 aa16.32■□□□□ 0.2
CTSA-218ENST00000607814 VCAM1P19320 739 aa16.32■□□□□ 0.2
CTSA-218ENST00000607814 PDE1AP54750 535 aa16.32■□□□□ 0.2
CTSA-218ENST00000607814 GABPAQ06546 454 aa16.32■□□□□ 0.2
CTSA-218ENST00000607814 ABCB5Q2M3G0 1257 aa16.32■□□□□ 0.2
CTSA-218ENST00000607814 C9orf50Q5SZB4 431 aa16.32■□□□□ 0.2
CTSA-218ENST00000607814 TRPV1Q8NER1 839 aa16.32■□□□□ 0.2
CTSA-218ENST00000607814 NPLOC4Q8TAT6 608 aa16.32■□□□□ 0.2
CTSA-218ENST00000607814 ACER1Q8TDN7 264 aa16.32■□□□□ 0.2
CTSA-218ENST00000607814 APPBP2Q92624 585 aa16.32■□□□□ 0.2
CTSA-218ENST00000607814 EHD4Q9H223 541 aa16.32■□□□□ 0.2
CTSA-218ENST00000607814 TTYH1Q9H313 450 aaPredicted RBP16.32■□□□□ 0.2
CTSA-218ENST00000607814 MYH7P12883 1935 aa16.31■□□□□ 0.2
CTSA-218ENST00000607814 BAZ2AQ9UIF9 1905 aaKnown RBP16.31■□□□□ 0.2
CTSA-218ENST00000607814 NAV1Q8NEY1 1877 aa16.31■□□□□ 0.2
CTSA-218ENST00000607814 ZNF236Q9UL36 1845 aa16.31■□□□□ 0.2
CTSA-218ENST00000607814 BDP1A6H8Y1 2624 aa16.31■□□□□ 0.2
CTSA-218ENST00000607814 SEPT4O43236 478 aa16.31■□□□□ 0.2
CTSA-218ENST00000607814 GUCY1A2P33402 732 aa16.31■□□□□ 0.2
CTSA-218ENST00000607814 SEPT2Q15019 361 aa16.31■□□□□ 0.2
CTSA-218ENST00000607814 GJC2Q5T442 439 aaPredicted RBP16.31■□□□□ 0.2
CTSA-218ENST00000607814 CTR9Q6PD62 1173 aa16.31■□□□□ 0.2
CTSA-218ENST00000607814 CCDC129Q6ZRS4 1044 aa16.31■□□□□ 0.2
CTSA-218ENST00000607814 MYLIPQ8WY64 445 aa16.31■□□□□ 0.2
CTSA-218ENST00000607814 BADQ92934 168 aa16.31■□□□□ 0.2
CTSA-218ENST00000607814 PRDM5Q9NQX1 630 aaPredicted RBP16.31■□□□□ 0.2
CTSA-218ENST00000607814 PDLIM7Q9NR12 457 aa16.31■□□□□ 0.2
CTSA-218ENST00000607814 BTBD7Q9P203 1132 aa16.31■□□□□ 0.2
CTSA-218ENST00000607814 GSG1L2A8MUP6 293 aa16.3■□□□□ 0.2
CTSA-218ENST00000607814 GPAA1O43292 621 aa16.3■□□□□ 0.2
CTSA-218ENST00000607814 APPP05067 770 aa16.3■□□□□ 0.2
CTSA-218ENST00000607814 AAMPQ13685 434 aa16.3■□□□□ 0.2
CTSA-218ENST00000607814 DPP9Q86TI2 863 aa16.3■□□□□ 0.2
CTSA-218ENST00000607814 CHD1LQ86WJ1 897 aa16.3■□□□□ 0.2
CTSA-218ENST00000607814 CLEC10AQ8IUN9 316 aa16.3■□□□□ 0.2
CTSA-218ENST00000607814 ATP8A2Q9NTI2 1148 aa16.3■□□□□ 0.2
CTSA-218ENST00000607814 SLC5A4Q9NY91 659 aa16.3■□□□□ 0.2
CTSA-218ENST00000607814 SPDYE16A6NNV3 312 aaPredicted RBP16.29■□□□□ 0.2
CTSA-218ENST00000607814 MINDY4BA8MYZ0 360 aa16.29■□□□□ 0.2
CTSA-218ENST00000607814 AKR1B1P15121 316 aa16.29■□□□□ 0.2
CTSA-218ENST00000607814 NUCB1Q02818 461 aa16.29■□□□□ 0.2
CTSA-218ENST00000607814 TRIM60Q495X7 471 aa16.29■□□□□ 0.2
CTSA-218ENST00000607814 C12orf60Q5U649 245 aa16.29■□□□□ 0.2
CTSA-218ENST00000607814 SHCBP1Q8NEM2 672 aa16.29■□□□□ 0.2
CTSA-218ENST00000607814 EPB41L4AQ9HCS5 686 aaPredicted RBP16.29■□□□□ 0.2
CTSA-218ENST00000607814 CABP5Q9NP86 173 aa16.29■□□□□ 0.2
CTSA-218ENST00000607814 HOXC10Q9NYD6 342 aa16.29■□□□□ 0.2
CTSA-218ENST00000607814 TACC3Q9Y6A5 838 aa16.29■□□□□ 0.2
CTSA-218ENST00000607814 ZFYP08048 801 aaPredicted RBP16.28■□□□□ 0.2
CTSA-218ENST00000607814 ADORA2AP29274 412 aa16.28■□□□□ 0.2
CTSA-218ENST00000607814 CDK8P49336 464 aa16.28■□□□□ 0.2
CTSA-218ENST00000607814 TJAP1Q5JTD0 557 aa16.28■□□□□ 0.2
CTSA-218ENST00000607814 PLEKHM2Q8IWE5 1019 aa16.28■□□□□ 0.2
CTSA-218ENST00000607814 ABRAQ8N0Z2 381 aa16.28■□□□□ 0.2
CTSA-218ENST00000607814 RILPL2Q969X0 211 aa16.28■□□□□ 0.2
CTSA-218ENST00000607814 RPAP3Q9H6T3 665 aaPredicted RBP16.28■□□□□ 0.2
CTSA-218ENST00000607814 A0A1W2PRG0 241 aa16.27■□□□□ 0.2
CTSA-218ENST00000607814 TRIM43BA6NCK2 446 aa16.27■□□□□ 0.2
CTSA-218ENST00000607814 TRIM6-TRIM34B2RNG4 842 aa16.27■□□□□ 0.2
CTSA-218ENST00000607814 COG2Q14746 738 aa16.27■□□□□ 0.2
CTSA-218ENST00000607814 ZMYM1Q5SVZ6 1142 aa16.27■□□□□ 0.2
CTSA-218ENST00000607814 MB21D1Q8N884 522 aa16.27■□□□□ 0.2
CTSA-218ENST00000607814 TRIM43Q96BQ3 446 aaPredicted RBP16.27■□□□□ 0.2
CTSA-218ENST00000607814 DDRGK1Q96HY6 314 aa16.27■□□□□ 0.2
CTSA-218ENST00000607814 MOV10L1Q9BXT6 1211 aaKnown RBP16.27■□□□□ 0.2
CTSA-218ENST00000607814 NRBP1Q9UHY1 535 aa16.27■□□□□ 0.2
CTSA-218ENST00000607814 ADCYAP1R1P41586 468 aa16.26■□□□□ 0.19
CTSA-218ENST00000607814 TDO2P48775 406 aa16.26■□□□□ 0.19
CTSA-218ENST00000607814 LRRC41Q15345 812 aa16.26■□□□□ 0.19
CTSA-218ENST00000607814 IFNL3Q8IZI9 196 aa16.26■□□□□ 0.19
CTSA-218ENST00000607814 EVI5LQ96CN4 794 aa16.26■□□□□ 0.19
CTSA-218ENST00000607814 RNPC3Q96LT9 517 aaKnown RBP16.26■□□□□ 0.19
CTSA-218ENST00000607814 FAM227BQ96M60 508 aa16.26■□□□□ 0.19
CTSA-218ENST00000607814 SPATC1LQ9H0A9 340 aa16.26■□□□□ 0.19
CTSA-218ENST00000607814 MROH8Q9H579 483 aa16.26■□□□□ 0.19
CTSA-218ENST00000607814 PATL2C9JE40 543 aaKnown RBP16.25■□□□□ 0.19
CTSA-218ENST00000607814 TNFRSF10AO00220 468 aa16.25■□□□□ 0.19
CTSA-218ENST00000607814 KIAA0355O15063 1070 aa16.25■□□□□ 0.19
CTSA-218ENST00000607814 PRDM1O75626 825 aa16.25■□□□□ 0.19
CTSA-218ENST00000607814 CLTBP09497 229 aa16.25■□□□□ 0.19
CTSA-218ENST00000607814 PDE4AP27815 886 aa16.25■□□□□ 0.19
CTSA-218ENST00000607814 TLE2Q04725 743 aa16.25■□□□□ 0.19
CTSA-218ENST00000607814 KIAA1755Q5JYT7 1200 aa16.25■□□□□ 0.19
CTSA-218ENST00000607814 VPS53Q5VIR6 699 aa16.25■□□□□ 0.19
CTSA-218ENST00000607814 C16orf86Q6ZW13 317 aa16.25■□□□□ 0.19
CTSA-218ENST00000607814 SH3RF1Q7Z6J0 888 aa16.25■□□□□ 0.19
CTSA-218ENST00000607814 SIAH1Q8IUQ4 282 aa16.25■□□□□ 0.19
CTSA-218ENST00000607814 AMOTL1Q8IY63 956 aa16.25■□□□□ 0.19
CTSA-218ENST00000607814 SWAP70Q9UH65 585 aa16.25■□□□□ 0.19
CTSA-218ENST00000607814 PHF24Q9UPV7 400 aa16.25■□□□□ 0.19
CTSA-218ENST00000607814 ERCC3P19447 782 aa16.24■□□□□ 0.19
CTSA-218ENST00000607814 INCENPQ9NQS7 918 aa16.24■□□□□ 0.19
CTSA-218ENST00000607814 CHD9Q3L8U1 2897 aa16.23■□□□□ 0.19
CTSA-218ENST00000607814 A0A0D9SFI3 127 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms