RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 OXER1Q8TDS5 423 aa24.86■■□□□ 1.57
USP6NL-204ENST00000606752 MYH15Q9Y2K3 1946 aa24.86■■□□□ 1.57
USP6NL-204ENST00000606752 JAG1P78504 1218 aa24.86■■□□□ 1.57
USP6NL-204ENST00000606752 MAP3K10Q02779 954 aa24.86■■□□□ 1.57
USP6NL-204ENST00000606752 ZNF543Q08ER8 600 aa24.86■■□□□ 1.57
USP6NL-204ENST00000606752 NR5A1Q13285 461 aa24.86■■□□□ 1.57
USP6NL-204ENST00000606752 CDAN1Q8IWY9 1227 aa24.86■■□□□ 1.57
USP6NL-204ENST00000606752 RIOX1Q9H6W3 641 aa24.86■■□□□ 1.57
USP6NL-204ENST00000606752 GPATCH4Q5T3I0 446 aaKnown RBP24.85■■□□□ 1.57
USP6NL-204ENST00000606752 KCNG4Q8TDN1 519 aa24.85■■□□□ 1.57
USP6NL-204ENST00000606752 RRP36Q96EU6 259 aaKnown RBP24.85■■□□□ 1.57
USP6NL-204ENST00000606752 CPVLQ9H3G5 476 aa24.85■■□□□ 1.57
USP6NL-204ENST00000606752 FRMPD2Q68DX3 1309 aaPredicted RBP24.85■■□□□ 1.57
USP6NL-204ENST00000606752 NLRP5P59047 1200 aa24.84■■□□□ 1.57
USP6NL-204ENST00000606752 STK38Q15208 465 aa24.84■■□□□ 1.57
USP6NL-204ENST00000606752 FAM177A1Q8N128 213 aaPredicted RBP24.84■■□□□ 1.57
USP6NL-204ENST00000606752 UBA5Q9GZZ9 404 aa24.84■■□□□ 1.57
USP6NL-204ENST00000606752 GPRC5DQ9NZD1 345 aa24.84■■□□□ 1.57
USP6NL-204ENST00000606752 CALML3P27482 149 aa24.84■■□□□ 1.57
USP6NL-204ENST00000606752 NPY5RQ15761 445 aa24.84■■□□□ 1.57
USP6NL-204ENST00000606752 HACL1Q9UJ83 578 aa24.84■■□□□ 1.57
USP6NL-204ENST00000606752 ME1P48163 572 aa24.83■■□□□ 1.57
USP6NL-204ENST00000606752 RILPL1Q5EBL4 403 aa24.83■■□□□ 1.57
USP6NL-204ENST00000606752 MIGA2Q7L4E1 593 aa24.83■■□□□ 1.57
USP6NL-204ENST00000606752 GPCPD1Q9NPB8 672 aa24.83■■□□□ 1.57
USP6NL-204ENST00000606752 BARHL2Q9NY43 387 aa24.83■■□□□ 1.57
USP6NL-204ENST00000606752 SPTLC2O15270 562 aa24.82■■□□□ 1.56
USP6NL-204ENST00000606752 YBX3P16989 372 aaKnown RBP eCLIP24.82■■□□□ 1.56
USP6NL-204ENST00000606752 ZNF445P59923 1031 aa24.82■■□□□ 1.56
USP6NL-204ENST00000606752 SLC39A14Q15043 492 aa24.82■■□□□ 1.56
USP6NL-204ENST00000606752 SF3A1Q15459 793 aaKnown RBP24.82■■□□□ 1.56
USP6NL-204ENST00000606752 DCAF4Q8WV16 495 aa24.82■■□□□ 1.56
USP6NL-204ENST00000606752 GPKOWQ92917 476 aaPredicted RBP eCLIP24.82■■□□□ 1.56
USP6NL-204ENST00000606752 TEPSINQ96N21 525 aa24.82■■□□□ 1.56
USP6NL-204ENST00000606752 VAT1LQ9HCJ6 419 aa24.82■■□□□ 1.56
USP6NL-204ENST00000606752 SEC63Q9UGP8 760 aaKnown RBP24.82■■□□□ 1.56
USP6NL-204ENST00000606752 SYNPO2Q9UMS6 1093 aa24.82■■□□□ 1.56
USP6NL-204ENST00000606752 WWC2Q6AWC2 1192 aa24.82■■□□□ 1.56
USP6NL-204ENST00000606752 HEATR3Q7Z4Q2 680 aa24.82■■□□□ 1.56
USP6NL-204ENST00000606752 BICD2Q8TD16 824 aa24.82■■□□□ 1.56
USP6NL-204ENST00000606752 TOB1P50616 345 aaPredicted RBP24.81■■□□□ 1.56
USP6NL-204ENST00000606752 CCDC96Q2M329 555 aa24.81■■□□□ 1.56
USP6NL-204ENST00000606752 CCDC183Q5T5S1 534 aa24.81■■□□□ 1.56
USP6NL-204ENST00000606752 SLFN13Q68D06 897 aa24.81■■□□□ 1.56
USP6NL-204ENST00000606752 GMCL1P1Q8NEA9 526 aa24.81■■□□□ 1.56
USP6NL-204ENST00000606752 CCDC148Q8NFR7 591 aa24.81■■□□□ 1.56
USP6NL-204ENST00000606752 PCDHA7Q9UN72 937 aa24.81■■□□□ 1.56
USP6NL-204ENST00000606752 SCAF8Q9UPN6 1271 aaKnown RBP24.81■■□□□ 1.56
USP6NL-204ENST00000606752 DICER1Q9UPY3 1922 aaKnown RBP24.81■■□□□ 1.56
USP6NL-204ENST00000606752 ASTN2O75129 1339 aaPredicted RBP24.81■■□□□ 1.56
USP6NL-204ENST00000606752 STXBP3O00186 592 aa24.8■■□□□ 1.56
USP6NL-204ENST00000606752 ADALQ6DHV7 355 aa24.8■■□□□ 1.56
USP6NL-204ENST00000606752 GALNT17Q6IS24 598 aa24.8■■□□□ 1.56
USP6NL-204ENST00000606752 HOMER1Q86YM7 354 aa24.8■■□□□ 1.56
USP6NL-204ENST00000606752 TNFRSF25Q93038 417 aa24.8■■□□□ 1.56
USP6NL-204ENST00000606752 PIGSQ96S52 555 aa24.8■■□□□ 1.56
USP6NL-204ENST00000606752 RNF181Q9P0P0 153 aa24.8■■□□□ 1.56
USP6NL-204ENST00000606752 ZBTB21Q9ULJ3 1066 aa24.8■■□□□ 1.56
USP6NL-204ENST00000606752 F5H6K3 240 aa24.79■■□□□ 1.56
USP6NL-204ENST00000606752 LIG1P18858 919 aa24.79■■□□□ 1.56
USP6NL-204ENST00000606752 CAP2P40123 477 aa24.79■■□□□ 1.56
USP6NL-204ENST00000606752 SLC1A4P43007 532 aa24.79■■□□□ 1.56
USP6NL-204ENST00000606752 KLRC3Q07444 240 aa24.79■■□□□ 1.56
USP6NL-204ENST00000606752 DEFB129Q9H1M3 183 aa24.79■■□□□ 1.56
USP6NL-204ENST00000606752 MYH4Q9Y623 1939 aa24.79■■□□□ 1.56
USP6NL-204ENST00000606752 DEKP35659 375 aaKnown RBP24.79■■□□□ 1.56
USP6NL-204ENST00000606752 PTPAQ15257 358 aa24.79■■□□□ 1.56
USP6NL-204ENST00000606752 TTBK2Q6IQ55 1244 aa24.79■■□□□ 1.56
USP6NL-204ENST00000606752 TYW1BQ6NUM6 668 aa24.79■■□□□ 1.56
USP6NL-204ENST00000606752 KCTD1Q719H9 257 aa24.79■■□□□ 1.56
USP6NL-204ENST00000606752 CCDC12Q8WUD4 166 aaPredicted RBP24.79■■□□□ 1.56
USP6NL-204ENST00000606752 ISY1Q9ULR0 285 aaKnown RBP24.79■■□□□ 1.56
USP6NL-204ENST00000606752 PCDHA4Q9UN74 947 aa24.79■■□□□ 1.56
USP6NL-204ENST00000606752 RAD21O60216 631 aa24.78■■□□□ 1.56
USP6NL-204ENST00000606752 PPP6R2O75170 966 aa24.78■■□□□ 1.56
USP6NL-204ENST00000606752 ADGRF4Q8IZF3 695 aa24.78■■□□□ 1.56
USP6NL-204ENST00000606752 BLIDQ8IZY5 108 aa24.78■■□□□ 1.56
USP6NL-204ENST00000606752 JMYQ8N9B5 988 aa24.78■■□□□ 1.56
USP6NL-204ENST00000606752 GMCL1Q96IK5 515 aa24.78■■□□□ 1.56
USP6NL-204ENST00000606752 ARHGEF10LQ9HCE6 1279 aa24.78■■□□□ 1.56
USP6NL-204ENST00000606752 EIF4ENIF1Q9NRA8 985 aaKnown RBP24.78■■□□□ 1.56
USP6NL-204ENST00000606752 SBF1O95248 1867 aa24.78■■□□□ 1.56
USP6NL-204ENST00000606752 A0A1W2PRG0 241 aa24.77■■□□□ 1.56
USP6NL-204ENST00000606752 FSD2A1L4K1 749 aa24.77■■□□□ 1.56
USP6NL-204ENST00000606752 GOLGA6L3A6NEY3 463 aa24.77■■□□□ 1.56
USP6NL-204ENST00000606752 hCG_1984214I3L0E3 225 aa24.77■■□□□ 1.56
USP6NL-204ENST00000606752 LETM1O95202 739 aaPredicted RBP24.77■■□□□ 1.56
USP6NL-204ENST00000606752 EPS15P42566 896 aa24.77■■□□□ 1.56
USP6NL-204ENST00000606752 ZNF713Q8N859 430 aaPredicted RBP24.77■■□□□ 1.56
USP6NL-204ENST00000606752 DAGLBQ8NCG7 672 aa24.77■■□□□ 1.56
USP6NL-204ENST00000606752 TRPM4Q8TD43 1214 aa24.77■■□□□ 1.56
USP6NL-204ENST00000606752 JMJD4Q9H9V9 463 aa24.77■■□□□ 1.56
USP6NL-204ENST00000606752 A0A1W2PQ27 194 aa24.77■■□□□ 1.56
USP6NL-204ENST00000606752 A0A1W2PQ64 194 aa24.77■■□□□ 1.56
USP6NL-204ENST00000606752 A0A1W2PQD8 194 aa24.77■■□□□ 1.56
USP6NL-204ENST00000606752 EARS2Q5JPH6 523 aaKnown RBP24.77■■□□□ 1.56
USP6NL-204ENST00000606752 APOBEC3FQ8IUX4 373 aaKnown RBP24.77■■□□□ 1.56
USP6NL-204ENST00000606752 CCAR1Q8IX12 1150 aaKnown RBP24.77■■□□□ 1.56
USP6NL-204ENST00000606752 SYCE3A1L190 88 aa24.76■■□□□ 1.55
USP6NL-204ENST00000606752 PHF20L1A8MW92 1017 aa24.76■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 177.1 ms