RNA–Protein interactions for RNA: ENST00000602861.5

HCG18-248, Transcript of HLA complex group 18, humanhuman

TSL 3

Gene HCG18, Length 372 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-248ENST00000602861 CLP1Q92989 425 aaKnown RBP9.25□□□□□ -0.93
HCG18-248ENST00000602861 DDX11Q96FC9 970 aa9.25□□□□□ -0.93
HCG18-248ENST00000602861 MRFAP1L1Q96HT8 127 aa9.25□□□□□ -0.93
HCG18-248ENST00000602861 RBM17Q96I25 401 aaKnown RBP9.25□□□□□ -0.93
HCG18-248ENST00000602861 DSCC1Q9BVC3 393 aa9.25□□□□□ -0.93
HCG18-248ENST00000602861 C1QTNF2Q9BXJ5 285 aa9.25□□□□□ -0.93
HCG18-248ENST00000602861 HELLSQ9NRZ9 838 aa9.25□□□□□ -0.93
HCG18-248ENST00000602861 CDV3Q9UKY7 258 aaKnown RBP9.25□□□□□ -0.93
HCG18-248ENST00000602861 ABT1Q9ULW3 272 aaKnown RBP9.25□□□□□ -0.93
HCG18-248ENST00000602861 PTPDC1A2A3K4 754 aa9.24□□□□□ -0.93
HCG18-248ENST00000602861 NTSR2O95665 410 aa9.24□□□□□ -0.93
HCG18-248ENST00000602861 HSP90B1P14625 803 aaKnown RBP9.24□□□□□ -0.93
HCG18-248ENST00000602861 HOXA10P31260 410 aaPredicted RBP9.24□□□□□ -0.93
HCG18-248ENST00000602861 GTF2IP78347 998 aa9.24□□□□□ -0.93
HCG18-248ENST00000602861 FOXO4P98177 505 aa9.24□□□□□ -0.93
HCG18-248ENST00000602861 KCNC4Q03721 635 aa9.24□□□□□ -0.93
HCG18-248ENST00000602861 NCBP1Q09161 790 aaKnown RBP9.24□□□□□ -0.93
HCG18-248ENST00000602861 CHAF1AQ13111 956 aaPredicted RBP9.24□□□□□ -0.93
HCG18-248ENST00000602861 SNW1Q13573 536 aaKnown RBP9.24□□□□□ -0.93
HCG18-248ENST00000602861 STX1AQ16623 288 aa9.24□□□□□ -0.93
HCG18-248ENST00000602861 SWI5Q1ZZU3 235 aa9.24□□□□□ -0.93
HCG18-248ENST00000602861 SUSD4Q5VX71 490 aa9.24□□□□□ -0.93
HCG18-248ENST00000602861 ATL3Q6DD88 541 aa9.24□□□□□ -0.93
HCG18-248ENST00000602861 PHLDB3Q6NSJ2 640 aa9.24□□□□□ -0.93
HCG18-248ENST00000602861 SND1Q7KZF4 910 aaKnown RBP eCLIP9.24□□□□□ -0.93
HCG18-248ENST00000602861 DHX32Q7L7V1 743 aaKnown RBP9.24□□□□□ -0.93
HCG18-248ENST00000602861 ATG9AQ7Z3C6 839 aa9.24□□□□□ -0.93
HCG18-248ENST00000602861 UBE3BQ7Z3V4 1068 aa9.24□□□□□ -0.93
HCG18-248ENST00000602861 SLC51AQ86UW1 340 aa9.24□□□□□ -0.93
HCG18-248ENST00000602861 CCAR1Q8IX12 1150 aaKnown RBP9.24□□□□□ -0.93
HCG18-248ENST00000602861 NIM1KQ8IY84 436 aa9.24□□□□□ -0.93
HCG18-248ENST00000602861 PDCL2Q8N4E4 241 aa9.24□□□□□ -0.93
HCG18-248ENST00000602861 LRRC2Q9BYS8 371 aa9.24□□□□□ -0.93
HCG18-248ENST00000602861 GPR108Q9NPR9 543 aa9.24□□□□□ -0.93
HCG18-248ENST00000602861 CFAP45Q9UL16 551 aa9.24□□□□□ -0.93
HCG18-248ENST00000602861 PCNTO95613 3336 aa9.23□□□□□ -0.93
HCG18-248ENST00000602861 AKAP11Q9UKA4 1901 aa9.23□□□□□ -0.93
HCG18-248ENST00000602861 RASSF10A6NK89 507 aa9.23□□□□□ -0.93
HCG18-248ENST00000602861 H3BQV1 296 aa9.23□□□□□ -0.93
HCG18-248ENST00000602861 H7C1W4 665 aa9.23□□□□□ -0.93
HCG18-248ENST00000602861 PPIP5K2O43314 1243 aa9.23□□□□□ -0.93
HCG18-248ENST00000602861 HMGB1P09429 215 aaKnown RBP9.23□□□□□ -0.93
HCG18-248ENST00000602861 ZSCAN20P17040 1043 aaPredicted RBP9.23□□□□□ -0.93
HCG18-248ENST00000602861 ARID4AP29374 1257 aaPredicted RBP9.23□□□□□ -0.93
HCG18-248ENST00000602861 APOBRQ0VD83 1088 aa9.23□□□□□ -0.93
HCG18-248ENST00000602861 USP4Q13107 963 aa9.23□□□□□ -0.93
HCG18-248ENST00000602861 PARP10Q53GL7 1025 aa9.23□□□□□ -0.93
HCG18-248ENST00000602861 DDX46Q7L014 1031 aaKnown RBP9.23□□□□□ -0.93
HCG18-248ENST00000602861 DHX40Q8IX18 779 aaKnown RBP9.23□□□□□ -0.93
HCG18-248ENST00000602861 DRC7Q8IY82 874 aa9.23□□□□□ -0.93
HCG18-248ENST00000602861 TRMT44Q8IYL2 757 aaKnown RBP9.23□□□□□ -0.93
HCG18-248ENST00000602861 ZNF34Q8IZ26 560 aa9.23□□□□□ -0.93
HCG18-248ENST00000602861 ZNF396Q96N95 335 aaPredicted RBP9.23□□□□□ -0.93
HCG18-248ENST00000602861 USP28Q96RU2 1077 aa9.23□□□□□ -0.93
HCG18-248ENST00000602861 CRAMP1Q96RY5 1269 aa9.23□□□□□ -0.93
HCG18-248ENST00000602861 DNAJC2Q99543 621 aaKnown RBP9.23□□□□□ -0.93
HCG18-248ENST00000602861 FTOQ9C0B1 505 aaKnown RBP eCLIP9.23□□□□□ -0.93
HCG18-248ENST00000602861 TMX4Q9H1E5 349 aaPredicted RBP9.23□□□□□ -0.93
HCG18-248ENST00000602861 PRDM10Q9NQV6 1147 aa9.23□□□□□ -0.93
HCG18-248ENST00000602861 KCND1Q9NSA2 647 aa9.23□□□□□ -0.93
HCG18-248ENST00000602861 CLIP2Q9UDT6 1046 aa9.23□□□□□ -0.93
HCG18-248ENST00000602861 PCDHB11Q9Y5F2 797 aa9.23□□□□□ -0.93
HCG18-248ENST00000602861 MYO5AQ9Y4I1 1855 aaKnown RBP9.23□□□□□ -0.93
HCG18-248ENST00000602861 E7EWF7 191 aa9.22□□□□□ -0.93
HCG18-248ENST00000602861 NEMFO60524 1076 aa9.22□□□□□ -0.93
HCG18-248ENST00000602861 TNNT1P13805 278 aa9.22□□□□□ -0.93
HCG18-248ENST00000602861 SCNN1DP51172 638 aa9.22□□□□□ -0.93
HCG18-248ENST00000602861 LBX1P52954 281 aa9.22□□□□□ -0.93
HCG18-248ENST00000602861 EVCP57679 992 aa9.22□□□□□ -0.93
HCG18-248ENST00000602861 DEFB115Q30KQ5 88 aa9.22□□□□□ -0.93
HCG18-248ENST00000602861 LRRC8AQ8IWT6 810 aa9.22□□□□□ -0.93
HCG18-248ENST00000602861 SIX5Q8N196 739 aa9.22□□□□□ -0.93
HCG18-248ENST00000602861 FBXL16Q8N461 479 aa9.22□□□□□ -0.93
HCG18-248ENST00000602861 PLBD2Q8NHP8 589 aa9.22□□□□□ -0.93
HCG18-248ENST00000602861 ZNF274Q96GC6 653 aaPredicted RBP9.22□□□□□ -0.93
HCG18-248ENST00000602861 UTP14AQ9BVJ6 771 aaKnown RBP9.22□□□□□ -0.93
HCG18-248ENST00000602861 KIAA1024Q9UPX6 916 aa9.22□□□□□ -0.93
HCG18-248ENST00000602861 MAST3O60307 1309 aa9.22□□□□□ -0.93
HCG18-248ENST00000602861 RNF113AO15541 343 aaKnown RBP9.21□□□□□ -0.94
HCG18-248ENST00000602861 FDPSP14324 419 aaKnown RBP9.21□□□□□ -0.94
HCG18-248ENST00000602861 ATP2B4P23634 1241 aa9.21□□□□□ -0.94
HCG18-248ENST00000602861 PDIA3P30101 505 aaKnown RBP9.21□□□□□ -0.94
HCG18-248ENST00000602861 GGCXP38435 758 aa9.21□□□□□ -0.94
HCG18-248ENST00000602861 EPS15P42566 896 aa9.21□□□□□ -0.94
HCG18-248ENST00000602861 SEC13P55735 322 aa9.21□□□□□ -0.94
HCG18-248ENST00000602861 RAB15P59190 212 aa9.21□□□□□ -0.94
HCG18-248ENST00000602861 CBX1P83916 185 aa9.21□□□□□ -0.94
HCG18-248ENST00000602861 CCZ1BP86790 482 aa9.21□□□□□ -0.94
HCG18-248ENST00000602861 CCZ1P86791 482 aaPredicted RBP9.21□□□□□ -0.94
HCG18-248ENST00000602861 FAM160A1Q05DH4 1040 aa9.21□□□□□ -0.94
HCG18-248ENST00000602861 GRM1Q13255 1194 aa9.21□□□□□ -0.94
HCG18-248ENST00000602861 ARID5BQ14865 1188 aa9.21□□□□□ -0.94
HCG18-248ENST00000602861 AOC3Q16853 763 aa9.21□□□□□ -0.94
HCG18-248ENST00000602861 CCDC102BQ68D86 513 aa9.21□□□□□ -0.94
HCG18-248ENST00000602861 LMBR1LQ6UX01 489 aa9.21□□□□□ -0.94
HCG18-248ENST00000602861 CCDC73Q6ZRK6 1079 aa9.21□□□□□ -0.94
HCG18-248ENST00000602861 FSIP1Q8NA03 581 aa9.21□□□□□ -0.94
HCG18-248ENST00000602861 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.21□□□□□ -0.94
HCG18-248ENST00000602861 C16orf45Q96MC5 204 aaPredicted RBP9.21□□□□□ -0.94
HCG18-248ENST00000602861 NLRP3Q96P20 1036 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms