RNA–Protein interactions for RNA: ENST00000602516.1

HCG18-244, Transcript of HLA complex group 18, humanhuman

BASIC

Gene HCG18, Length 2,890 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-244ENST00000602516 TMEM87AQ8NBN3 555 aa8.6□□□□□ -1.03
HCG18-244ENST00000602516 PLA2G12BQ9BX93 195 aa8.6□□□□□ -1.03
HCG18-244ENST00000602516 KIF9Q9HAQ2 790 aa8.6□□□□□ -1.03
HCG18-244ENST00000602516 BTG4Q9NY30 223 aa8.6□□□□□ -1.03
HCG18-244ENST00000602516 ASAP1Q9ULH1 1129 aa8.6□□□□□ -1.03
HCG18-244ENST00000602516 IKBKGQ9Y6K9 419 aa8.6□□□□□ -1.03
HCG18-244ENST00000602516 BCL9O00512 1426 aa8.59□□□□□ -1.03
HCG18-244ENST00000602516 DYTNA2CJ06 578 aa8.59□□□□□ -1.03
HCG18-244ENST00000602516 ZSCAN22P10073 491 aaPredicted RBP8.59□□□□□ -1.03
HCG18-244ENST00000602516 SYT1P21579 422 aa8.59□□□□□ -1.03
HCG18-244ENST00000602516 USP11P51784 963 aa8.59□□□□□ -1.03
HCG18-244ENST00000602516 HDAC4P56524 1084 aa8.59□□□□□ -1.03
HCG18-244ENST00000602516 NEDD9Q14511 834 aa8.59□□□□□ -1.03
HCG18-244ENST00000602516 KIAA0753Q2KHM9 967 aa8.59□□□□□ -1.03
HCG18-244ENST00000602516 RRP12Q5JTH9 1297 aaKnown RBP8.59□□□□□ -1.03
HCG18-244ENST00000602516 FAM114A1Q8IWE2 563 aa8.59□□□□□ -1.03
HCG18-244ENST00000602516 PEX5LQ8IYB4 626 aa8.59□□□□□ -1.03
HCG18-244ENST00000602516 KBTBD3Q8NAB2 608 aa8.59□□□□□ -1.03
HCG18-244ENST00000602516 EXOC4Q96A65 974 aa8.59□□□□□ -1.03
HCG18-244ENST00000602516 ZBTB10Q96DT7 871 aa8.59□□□□□ -1.03
HCG18-244ENST00000602516 ZSCAN16Q9H4T2 348 aaPredicted RBP8.59□□□□□ -1.03
HCG18-244ENST00000602516 DCAF16Q9NXF7 216 aa8.59□□□□□ -1.03
HCG18-244ENST00000602516 MCM8Q9UJA3 840 aa8.59□□□□□ -1.03
HCG18-244ENST00000602516 NSFL1CQ9UNZ2 370 aaKnown RBP8.59□□□□□ -1.03
HCG18-244ENST00000602516 COLQQ9Y215 455 aaPredicted RBP8.59□□□□□ -1.03
HCG18-244ENST00000602516 SH3TC1Q8TE82 1336 aa8.59□□□□□ -1.03
HCG18-244ENST00000602516 STX6O43752 255 aa8.59□□□□□ -1.03
HCG18-244ENST00000602516 ME3Q16798 604 aa8.59□□□□□ -1.03
HCG18-244ENST00000602516 RELL1Q8IUW5 271 aa8.59□□□□□ -1.03
HCG18-244ENST00000602516 ANKRD18AQ8IVF6 992 aa8.59□□□□□ -1.03
HCG18-244ENST00000602516 B4GALNT2Q8NHY0 566 aa8.59□□□□□ -1.03
HCG18-244ENST00000602516 RSRC1Q96IZ7 334 aaKnown RBP8.59□□□□□ -1.03
HCG18-244ENST00000602516 C6orf203Q9P0P8 240 aaPredicted RBP8.59□□□□□ -1.03
HCG18-244ENST00000602516 CARNS1A5YM72 827 aa8.59□□□□□ -1.04
HCG18-244ENST00000602516 NUTM2BA6NNL0 878 aaPredicted RBP8.59□□□□□ -1.04
HCG18-244ENST00000602516 NUTM2EB1AL46 878 aaPredicted RBP8.59□□□□□ -1.04
HCG18-244ENST00000602516 PCCAP05165 728 aaPredicted RBP8.59□□□□□ -1.04
HCG18-244ENST00000602516 RPL17P18621 184 aaKnown RBP8.59□□□□□ -1.04
HCG18-244ENST00000602516 RPS6KB1P23443 525 aa8.59□□□□□ -1.04
HCG18-244ENST00000602516 TIE1P35590 1138 aa8.59□□□□□ -1.04
HCG18-244ENST00000602516 MNAT1P51948 309 aa8.59□□□□□ -1.04
HCG18-244ENST00000602516 LAMB3Q13751 1172 aa8.59□□□□□ -1.04
HCG18-244ENST00000602516 COL9A3Q14050 684 aaPredicted RBP8.59□□□□□ -1.04
HCG18-244ENST00000602516 MCMDC2Q4G0Z9 681 aa8.59□□□□□ -1.04
HCG18-244ENST00000602516 RC3H1Q5TC82 1133 aaKnown RBP8.59□□□□□ -1.04
HCG18-244ENST00000602516 NT5DC4Q86YG4 428 aa8.59□□□□□ -1.04
HCG18-244ENST00000602516 NUTM2AQ8IVF1 878 aaPredicted RBP8.59□□□□□ -1.04
HCG18-244ENST00000602516 DNAJC10Q8IXB1 793 aa8.59□□□□□ -1.04
HCG18-244ENST00000602516 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.59□□□□□ -1.04
HCG18-244ENST00000602516 GOLGA1Q92805 767 aa8.59□□□□□ -1.04
HCG18-244ENST00000602516 BRD8Q9H0E9 1235 aa8.59□□□□□ -1.04
HCG18-244ENST00000602516 SFMBT1Q9UHJ3 866 aa8.59□□□□□ -1.04
HCG18-244ENST00000602516 TPCN1Q9ULQ1 816 aa8.59□□□□□ -1.04
HCG18-244ENST00000602516 TAF6LQ9Y6J9 622 aa8.59□□□□□ -1.04
HCG18-244ENST00000602516 LAMA4Q16363 1823 aa8.59□□□□□ -1.04
HCG18-244ENST00000602516 C2orf72A6NCS6 295 aa8.58□□□□□ -1.04
HCG18-244ENST00000602516 EIF3CLB5ME19 914 aaKnown RBP8.58□□□□□ -1.04
HCG18-244ENST00000602516 HOXA2O43364 376 aa8.58□□□□□ -1.04
HCG18-244ENST00000602516 CSF1RP07333 972 aa8.58□□□□□ -1.04
HCG18-244ENST00000602516 CD53P19397 219 aa8.58□□□□□ -1.04
HCG18-244ENST00000602516 ZNF131P52739 623 aa8.58□□□□□ -1.04
HCG18-244ENST00000602516 ANKRD1Q15327 319 aa8.58□□□□□ -1.04
HCG18-244ENST00000602516 LRRC24Q50LG9 513 aa8.58□□□□□ -1.04
HCG18-244ENST00000602516 BLOC1S2Q6QNY1 142 aa8.58□□□□□ -1.04
HCG18-244ENST00000602516 CCDC83Q8IWF9 413 aa8.58□□□□□ -1.04
HCG18-244ENST00000602516 GOLGA5Q8TBA6 731 aa8.58□□□□□ -1.04
HCG18-244ENST00000602516 FAM81AQ8TBF8 368 aa8.58□□□□□ -1.04
HCG18-244ENST00000602516 SH3TC2Q8TF17 1288 aa8.58□□□□□ -1.04
HCG18-244ENST00000602516 EIF3CQ99613 913 aaKnown RBP8.58□□□□□ -1.04
HCG18-244ENST00000602516 MAK16Q9BXY0 300 aaKnown RBP8.58□□□□□ -1.04
HCG18-244ENST00000602516 CHMP3Q9Y3E7 222 aa8.58□□□□□ -1.04
HCG18-244ENST00000602516 NDUFB9Q9Y6M9 179 aa8.58□□□□□ -1.04
HCG18-244ENST00000602516 MYH3P11055 1940 aa8.58□□□□□ -1.04
HCG18-244ENST00000602516 STARD3NLO95772 234 aa8.58□□□□□ -1.04
HCG18-244ENST00000602516 CLCN2P51788 898 aa8.58□□□□□ -1.04
HCG18-244ENST00000602516 TIMM10P62072 90 aa8.58□□□□□ -1.04
HCG18-244ENST00000602516 TOB2Q14106 344 aaPredicted RBP8.58□□□□□ -1.04
HCG18-244ENST00000602516 KRT32Q14532 448 aa8.58□□□□□ -1.04
HCG18-244ENST00000602516 TTC39BQ5VTQ0 682 aaPredicted RBP8.58□□□□□ -1.04
HCG18-244ENST00000602516 OLFML1Q6UWY5 402 aa8.58□□□□□ -1.04
HCG18-244ENST00000602516 TMEM92Q6UXU6 159 aa8.58□□□□□ -1.04
HCG18-244ENST00000602516 GBP6Q6ZN66 633 aa8.58□□□□□ -1.04
HCG18-244ENST00000602516 SPIRE2Q8WWL2 714 aa8.58□□□□□ -1.04
HCG18-244ENST00000602516 GSDMAQ96QA5 445 aa8.58□□□□□ -1.04
HCG18-244ENST00000602516 MAP3K14Q99558 947 aa8.58□□□□□ -1.04
HCG18-244ENST00000602516 ACAD8Q9UKU7 415 aa8.58□□□□□ -1.04
HCG18-244ENST00000602516 ZNF652Q9Y2D9 606 aa8.58□□□□□ -1.04
HCG18-244ENST00000602516 NUP98P52948 1817 aa8.58□□□□□ -1.04
HCG18-244ENST00000602516 MAP3K15Q6ZN16 1313 aa8.57□□□□□ -1.04
HCG18-244ENST00000602516 MTRF1O75570 445 aaKnown RBP8.57□□□□□ -1.04
HCG18-244ENST00000602516 F13A1P00488 732 aa8.57□□□□□ -1.04
HCG18-244ENST00000602516 RPL13P26373 211 aaKnown RBP8.57□□□□□ -1.04
HCG18-244ENST00000602516 GJB2P29033 226 aa8.57□□□□□ -1.04
HCG18-244ENST00000602516 MRPL12P52815 198 aaKnown RBP8.57□□□□□ -1.04
HCG18-244ENST00000602516 CORO7P57737 925 aa8.57□□□□□ -1.04
HCG18-244ENST00000602516 TRIM29Q14134 588 aa8.57□□□□□ -1.04
HCG18-244ENST00000602516 SEPT2Q15019 361 aa8.57□□□□□ -1.04
HCG18-244ENST00000602516 MEX3CQ5U5Q3 659 aaKnown RBP8.57□□□□□ -1.04
HCG18-244ENST00000602516 LMBRD2Q68DH5 695 aaPredicted RBP8.57□□□□□ -1.04
HCG18-244ENST00000602516 CPLX2Q6PUV4 134 aaKnown RBP8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms