RNA–Protein interactions for RNA: ENST00000601656.5

FARP1-235, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 806 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-235ENST00000601656 IRF2BPLQ9H1B7 796 aa11.53□□□□□ -0.56
FARP1-235ENST00000601656 FZD1Q9UP38 647 aa11.53□□□□□ -0.56
FARP1-235ENST00000601656 FAN1Q9Y2M0 1017 aa11.53□□□□□ -0.56
FARP1-235ENST00000601656 SOX1O00570 391 aaPredicted RBP11.52□□□□□ -0.57
FARP1-235ENST00000601656 ZBTB48P10074 688 aaPredicted RBP11.52□□□□□ -0.57
FARP1-235ENST00000601656 RPS8P62241 208 aaKnown RBP11.52□□□□□ -0.57
FARP1-235ENST00000601656 DDX10Q13206 875 aaKnown RBP11.52□□□□□ -0.57
FARP1-235ENST00000601656 C11orf91Q3C1V1 193 aa11.52□□□□□ -0.57
FARP1-235ENST00000601656 INTS6LQ5JSJ4 861 aaKnown RBP11.52□□□□□ -0.57
FARP1-235ENST00000601656 WNK4Q96J92 1243 aa11.52□□□□□ -0.57
FARP1-235ENST00000601656 CFAP53Q96M91 514 aa11.52□□□□□ -0.57
FARP1-235ENST00000601656 SRPK1Q96SB4 655 aaKnown RBP11.52□□□□□ -0.57
FARP1-235ENST00000601656 COL25A1Q9BXS0 654 aaPredicted RBP11.52□□□□□ -0.57
FARP1-235ENST00000601656 ANKIB1Q9P2G1 1089 aa11.52□□□□□ -0.57
FARP1-235ENST00000601656 ERBB4Q15303 1308 aa11.52□□□□□ -0.57
FARP1-235ENST00000601656 WNT10BO00744 389 aa11.51□□□□□ -0.57
FARP1-235ENST00000601656 UFL1O94874 794 aa11.51□□□□□ -0.57
FARP1-235ENST00000601656 ADH1BP00325 375 aa11.51□□□□□ -0.57
FARP1-235ENST00000601656 ANXA1P04083 346 aa11.51□□□□□ -0.57
FARP1-235ENST00000601656 EIF2S2P20042 333 aaKnown RBP11.51□□□□□ -0.57
FARP1-235ENST00000601656 SMTNP53814 917 aa11.51□□□□□ -0.57
FARP1-235ENST00000601656 AIMP1Q12904 312 aaKnown RBP11.51□□□□□ -0.57
FARP1-235ENST00000601656 SF3B3Q15393 1217 aaKnown RBP11.51□□□□□ -0.57
FARP1-235ENST00000601656 MEI1Q5TIA1 1274 aa11.51□□□□□ -0.57
FARP1-235ENST00000601656 LRP10Q7Z4F1 713 aa11.51□□□□□ -0.57
FARP1-235ENST00000601656 SH3TC2Q8TF17 1288 aa11.51□□□□□ -0.57
FARP1-235ENST00000601656 CLMNQ96JQ2 1002 aa11.51□□□□□ -0.57
FARP1-235ENST00000601656 OSBPL7Q9BZF2 842 aa11.51□□□□□ -0.57
FARP1-235ENST00000601656 FAM8A1Q9UBU6 413 aa11.51□□□□□ -0.57
FARP1-235ENST00000601656 NR2E3Q9Y5X4 410 aa11.51□□□□□ -0.57
FARP1-235ENST00000601656 U2AF1L5P0DN76 240 aaPredicted RBP11.5□□□□□ -0.57
FARP1-235ENST00000601656 U2AF1Q01081 240 aaKnown RBP eCLIP11.5□□□□□ -0.57
FARP1-235ENST00000601656 COPS6Q7L5N1 327 aa11.5□□□□□ -0.57
FARP1-235ENST00000601656 SLKQ9H2G2 1235 aaPredicted RBP11.5□□□□□ -0.57
FARP1-235ENST00000601656 DDX56Q9NY93 547 aaKnown RBP11.5□□□□□ -0.57
FARP1-235ENST00000601656 GGA1Q9UJY5 639 aa11.5□□□□□ -0.57
FARP1-235ENST00000601656 NUDCQ9Y266 331 aa11.5□□□□□ -0.57
FARP1-235ENST00000601656 MAP4K5Q9Y4K4 846 aa11.5□□□□□ -0.57
FARP1-235ENST00000601656 COL4A1P02462 1669 aa11.49□□□□□ -0.57
FARP1-235ENST00000601656 UNC80Q8N2C7 3258 aa11.49□□□□□ -0.57
FARP1-235ENST00000601656 A0A1W2PPC1 479 aa11.49□□□□□ -0.57
FARP1-235ENST00000601656 GNRH1P01148 92 aa11.49□□□□□ -0.57
FARP1-235ENST00000601656 RPLP1P05386 114 aaKnown RBP11.49□□□□□ -0.57
FARP1-235ENST00000601656 PROSER3Q2NL68 480 aa11.49□□□□□ -0.57
FARP1-235ENST00000601656 PODNQ7Z5L7 613 aa11.49□□□□□ -0.57
FARP1-235ENST00000601656 EXOC8Q8IYI6 725 aa11.49□□□□□ -0.57
FARP1-235ENST00000601656 FAM89AQ96GI7 184 aa11.49□□□□□ -0.57
FARP1-235ENST00000601656 PTPN18Q99952 460 aa11.49□□□□□ -0.57
FARP1-235ENST00000601656 HTATIP2Q9BUP3 242 aa11.49□□□□□ -0.57
FARP1-235ENST00000601656 LAMB1P07942 1786 aa11.49□□□□□ -0.57
FARP1-235ENST00000601656 LAMA3Q16787 3333 aa11.48□□□□□ -0.57
FARP1-235ENST00000601656 CCDC194A0A1B0GVG4 234 aa11.48□□□□□ -0.57
FARP1-235ENST00000601656 NRG2O14511 850 aaPredicted RBP11.48□□□□□ -0.57
FARP1-235ENST00000601656 SASH1O94885 1247 aa11.48□□□□□ -0.57
FARP1-235ENST00000601656 MAP3K11Q16584 847 aa11.48□□□□□ -0.57
FARP1-235ENST00000601656 RTN1Q16799 776 aa11.48□□□□□ -0.57
FARP1-235ENST00000601656 APOBEC3FQ8IUX4 373 aaKnown RBP11.48□□□□□ -0.57
FARP1-235ENST00000601656 TTC16Q8NEE8 873 aa11.48□□□□□ -0.57
FARP1-235ENST00000601656 MXD3Q9BW11 206 aa11.48□□□□□ -0.57
FARP1-235ENST00000601656 TRIM55Q9BYV6 548 aa11.48□□□□□ -0.57
FARP1-235ENST00000601656 CDK2AP1O14519 115 aa11.47□□□□□ -0.57
FARP1-235ENST00000601656 MAP4K4O95819 1239 aaPredicted RBP11.47□□□□□ -0.57
FARP1-235ENST00000601656 RALBP1Q15311 655 aa11.47□□□□□ -0.57
FARP1-235ENST00000601656 ANKS3Q6ZW76 656 aa11.47□□□□□ -0.57
FARP1-235ENST00000601656 DEFB123Q8N688 67 aa11.47□□□□□ -0.57
FARP1-235ENST00000601656 XAGE3Q8WTP9 111 aa11.47□□□□□ -0.57
FARP1-235ENST00000601656 SHISA4Q96DD7 197 aa11.47□□□□□ -0.57
FARP1-235ENST00000601656 IFT43Q96FT9 208 aa11.47□□□□□ -0.57
FARP1-235ENST00000601656 SPON2Q9BUD6 331 aa11.47□□□□□ -0.57
FARP1-235ENST00000601656 SRCIN1Q9C0H9 1055 aa11.47□□□□□ -0.57
FARP1-235ENST00000601656 COPRSQ9NQ92 184 aa11.47□□□□□ -0.57
FARP1-235ENST00000601656 SNTG2Q9NY99 539 aa11.47□□□□□ -0.57
FARP1-235ENST00000601656 STRIP2Q9ULQ0 834 aa11.47□□□□□ -0.57
FARP1-235ENST00000601656 KLF4O43474 513 aa11.46□□□□□ -0.57
FARP1-235ENST00000601656 S100BP04271 92 aaPredicted RBP11.46□□□□□ -0.57
FARP1-235ENST00000601656 RAB33AQ14088 237 aa11.46□□□□□ -0.57
FARP1-235ENST00000601656 CYP2U1Q7Z449 544 aa11.46□□□□□ -0.57
FARP1-235ENST00000601656 DEFB129Q9H1M3 183 aa11.46□□□□□ -0.57
FARP1-235ENST00000601656 ZFYVE28Q9HCC9 887 aa11.46□□□□□ -0.57
FARP1-235ENST00000601656 SEC31BQ9NQW1 1179 aa11.46□□□□□ -0.57
FARP1-235ENST00000601656 STAP2Q9UGK3 403 aa11.46□□□□□ -0.57
FARP1-235ENST00000601656 STXBP5LQ9Y2K9 1186 aa11.46□□□□□ -0.57
FARP1-235ENST00000601656 ZNF646O15015 1829 aaPredicted RBP11.46□□□□□ -0.58
FARP1-235ENST00000601656 USP17L7P0C7H9 530 aa11.45□□□□□ -0.58
FARP1-235ENST00000601656 WNT7BP56706 349 aa11.45□□□□□ -0.58
FARP1-235ENST00000601656 SH3BP2P78314 561 aa11.45□□□□□ -0.58
FARP1-235ENST00000601656 C8orf34Q49A92 452 aa11.45□□□□□ -0.58
FARP1-235ENST00000601656 DACT2Q5SW24 774 aa11.45□□□□□ -0.58
FARP1-235ENST00000601656 VASH1Q7L8A9 365 aaPredicted RBP11.45□□□□□ -0.58
FARP1-235ENST00000601656 KIAA0825Q8IV33 1275 aa11.45□□□□□ -0.58
FARP1-235ENST00000601656 STAG1Q8WVM7 1258 aa11.45□□□□□ -0.58
FARP1-235ENST00000601656 CCDC74AQ96AQ1 378 aa11.45□□□□□ -0.58
FARP1-235ENST00000601656 DEPDC7Q96QD5 511 aa11.45□□□□□ -0.58
FARP1-235ENST00000601656 MYO3BQ8WXR4 1341 aa11.44□□□□□ -0.58
FARP1-235ENST00000601656 MYBBP1AQ9BQG0 1328 aaKnown RBP11.44□□□□□ -0.58
FARP1-235ENST00000601656 SERTM1A2A2V5 107 aa11.44□□□□□ -0.58
FARP1-235ENST00000601656 EML1O00423 815 aa11.44□□□□□ -0.58
FARP1-235ENST00000601656 IRS4O14654 1257 aaPredicted RBP11.44□□□□□ -0.58
FARP1-235ENST00000601656 CDC45O75419 566 aa11.44□□□□□ -0.58
FARP1-235ENST00000601656 IREB2P48200 963 aaKnown RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms