RNA–Protein interactions for RNA: ENST00000601357.6

SSBP4-209, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 606 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-209ENST00000601357 NPLOC4Q8TAT6 608 aa27.01■■□□□ 1.91
SSBP4-209ENST00000601357 PAWRQ96IZ0 340 aaKnown RBP27.01■■□□□ 1.91
SSBP4-209ENST00000601357 LNPKQ9C0E8 428 aa27.01■■□□□ 1.91
SSBP4-209ENST00000601357 NAPBQ9H115 298 aa27.01■■□□□ 1.91
SSBP4-209ENST00000601357 RWDD1Q9H446 243 aaPredicted RBP27.01■■□□□ 1.91
SSBP4-209ENST00000601357 FRMPD3Q5JV73 1810 aa27■■□□□ 1.91
SSBP4-209ENST00000601357 CCND3P30281 292 aaPredicted RBP27■■□□□ 1.91
SSBP4-209ENST00000601357 PPARAQ07869 468 aa27■■□□□ 1.91
SSBP4-209ENST00000601357 FAM83BQ5T0W9 1011 aa27■■□□□ 1.91
SSBP4-209ENST00000601357 MROH8Q9H579 483 aa27■■□□□ 1.91
SSBP4-209ENST00000601357 PPP1R9AQ9ULJ8 1098 aa27■■□□□ 1.91
SSBP4-209ENST00000601357 IGHDP01880 384 aa26.99■■□□□ 1.91
SSBP4-209ENST00000601357 ADORA2AP29274 412 aa26.99■■□□□ 1.91
SSBP4-209ENST00000601357 HABP4Q5JVS0 413 aaKnown RBP26.99■■□□□ 1.91
SSBP4-209ENST00000601357 LHX8Q68G74 356 aa26.99■■□□□ 1.91
SSBP4-209ENST00000601357 MKL1Q969V6 931 aa26.99■■□□□ 1.91
SSBP4-209ENST00000601357 MTMR4Q9NYA4 1195 aa26.99■■□□□ 1.91
SSBP4-209ENST00000601357 SYNPO2Q9UMS6 1093 aa26.99■■□□□ 1.91
SSBP4-209ENST00000601357 F5H6K3 240 aa26.98■■□□□ 1.91
SSBP4-209ENST00000601357 VWA5AO00534 786 aa26.98■■□□□ 1.91
SSBP4-209ENST00000601357 PDE4BQ07343 736 aa26.98■■□□□ 1.91
SSBP4-209ENST00000601357 KLRC3Q07444 240 aa26.98■■□□□ 1.91
SSBP4-209ENST00000601357 PLS1Q14651 629 aa26.98■■□□□ 1.91
SSBP4-209ENST00000601357 NECAB2Q7Z6G3 386 aa26.98■■□□□ 1.91
SSBP4-209ENST00000601357 ABRAQ8N0Z2 381 aa26.98■■□□□ 1.91
SSBP4-209ENST00000601357 CEP95Q96GE4 821 aa26.98■■□□□ 1.91
SSBP4-209ENST00000601357 HELLSQ9NRZ9 838 aa26.98■■□□□ 1.91
SSBP4-209ENST00000601357 CLIP2Q9UDT6 1046 aa26.98■■□□□ 1.91
SSBP4-209ENST00000601357 NDUFB10O96000 172 aa26.97■■□□□ 1.91
SSBP4-209ENST00000601357 VPS53Q5VIR6 699 aa26.97■■□□□ 1.91
SSBP4-209ENST00000601357 MFSD14CQ5VZR4 134 aa26.97■■□□□ 1.91
SSBP4-209ENST00000601357 REPS2Q8NFH8 660 aa26.97■■□□□ 1.91
SSBP4-209ENST00000601357 NEDD1Q8NHV4 660 aa26.97■■□□□ 1.91
SSBP4-209ENST00000601357 NUP88Q99567 741 aaPredicted RBP26.97■■□□□ 1.91
SSBP4-209ENST00000601357 ZNF214Q9UL59 606 aaPredicted RBP26.97■■□□□ 1.91
SSBP4-209ENST00000601357 CEP290O15078 2479 aa26.97■■□□□ 1.91
SSBP4-209ENST00000601357 RAD21O60216 631 aa26.96■■□□□ 1.91
SSBP4-209ENST00000601357 SLC25A27O95847 323 aa26.96■■□□□ 1.91
SSBP4-209ENST00000601357 SLC3A2P08195 630 aaKnown RBP26.96■■□□□ 1.91
SSBP4-209ENST00000601357 NUCB1Q02818 461 aa26.96■■□□□ 1.91
SSBP4-209ENST00000601357 OLFML2BQ68BL8 750 aa26.96■■□□□ 1.91
SSBP4-209ENST00000601357 SAMD1Q6SPF0 538 aaPredicted RBP26.96■■□□□ 1.91
SSBP4-209ENST00000601357 CHD1LQ86WJ1 897 aa26.96■■□□□ 1.91
SSBP4-209ENST00000601357 NCAPG2Q86XI2 1143 aa26.96■■□□□ 1.91
SSBP4-209ENST00000601357 COLQQ9Y215 455 aaPredicted RBP26.96■■□□□ 1.91
SSBP4-209ENST00000601357 DDX52Q9Y2R4 599 aaKnown RBP eCLIP26.96■■□□□ 1.911e-6■■■□□ 16.2
SSBP4-209ENST00000601357 COBLO75128 1261 aa26.95■■□□□ 1.9
SSBP4-209ENST00000601357 TTLL1O95922 423 aa26.95■■□□□ 1.9
SSBP4-209ENST00000601357 B4GALNT3Q6L9W6 998 aa26.95■■□□□ 1.9
SSBP4-209ENST00000601357 DPP9Q86TI2 863 aa26.95■■□□□ 1.9
SSBP4-209ENST00000601357 RIOX2Q8IUF8 465 aa26.95■■□□□ 1.9
SSBP4-209ENST00000601357 FAM227BQ96M60 508 aa26.95■■□□□ 1.9
SSBP4-209ENST00000601357 NBPF3Q9H094 633 aa26.95■■□□□ 1.9
SSBP4-209ENST00000601357 ZNFX1Q9P2E3 1918 aaKnown RBP26.94■■□□□ 1.9
SSBP4-209ENST00000601357 RANBP2P49792 3224 aaKnown RBP26.94■■□□□ 1.9
SSBP4-209ENST00000601357 A0A0D9SFI3 127 aa26.94■■□□□ 1.9
SSBP4-209ENST00000601357 TSPY3P0CV98 308 aa26.94■■□□□ 1.9
SSBP4-209ENST00000601357 TSPY8P0CW00 308 aa26.94■■□□□ 1.9
SSBP4-209ENST00000601357 CYP2C19P33261 490 aa26.94■■□□□ 1.9
SSBP4-209ENST00000601357 ALX1Q15699 326 aa26.94■■□□□ 1.9
SSBP4-209ENST00000601357 FAM47AQ5JRC9 791 aa26.94■■□□□ 1.9
SSBP4-209ENST00000601357 GMCL1P1Q8NEA9 526 aa26.94■■□□□ 1.9
SSBP4-209ENST00000601357 SLF1Q9BQI6 1058 aa26.94■■□□□ 1.9
SSBP4-209ENST00000601357 OSBPL3Q9H4L5 887 aa26.94■■□□□ 1.9
SSBP4-209ENST00000601357 ANAPC4Q9UJX5 808 aa26.94■■□□□ 1.9
SSBP4-209ENST00000601357 NR2E3Q9Y5X4 410 aa26.94■■□□□ 1.9
SSBP4-209ENST00000601357 TFAP4Q01664 338 aa26.93■■□□□ 1.9
SSBP4-209ENST00000601357 PLEKHM2Q8IWE5 1019 aa26.93■■□□□ 1.9
SSBP4-209ENST00000601357 TRPV1Q8NER1 839 aa26.93■■□□□ 1.9
SSBP4-209ENST00000601357 EVI5O60447 810 aa26.92■■□□□ 1.9
SSBP4-209ENST00000601357 FCER1AP12319 257 aa26.92■■□□□ 1.9
SSBP4-209ENST00000601357 CYBAP13498 195 aa26.92■■□□□ 1.9
SSBP4-209ENST00000601357 STAT3P40763 770 aa26.92■■□□□ 1.9
SSBP4-209ENST00000601357 MCMDC2Q4G0Z9 681 aa26.92■■□□□ 1.9
SSBP4-209ENST00000601357 C11orf49Q9H6J7 331 aa26.92■■□□□ 1.9
SSBP4-209ENST00000601357 TACC3Q9Y6A5 838 aa26.92■■□□□ 1.9
SSBP4-209ENST00000601357 COL6A1P12109 1028 aa26.91■■□□□ 1.9
SSBP4-209ENST00000601357 CTDSPL2Q05D32 466 aa26.91■■□□□ 1.9
SSBP4-209ENST00000601357 LRRC47Q8N1G4 583 aaKnown RBP26.91■■□□□ 1.9
SSBP4-209ENST00000601357 PRPF38AQ8NAV1 312 aaKnown RBP26.91■■□□□ 1.9
SSBP4-209ENST00000601357 SUPT16HQ9Y5B9 1047 aaKnown RBP26.91■■□□□ 1.9
SSBP4-209ENST00000601357 PFASO15067 1338 aa26.9■■□□□ 1.9
SSBP4-209ENST00000601357 PLXNA1Q9UIW2 1896 aa26.9■■□□□ 1.9
SSBP4-209ENST00000601357 COPB2P35606 906 aa26.9■■□□□ 1.9
SSBP4-209ENST00000601357 MAML3Q96JK9 1138 aa26.9■■□□□ 1.9
SSBP4-209ENST00000601357 INCENPQ9NQS7 918 aa26.9■■□□□ 1.9
SSBP4-209ENST00000601357 SLC5A4Q9NY91 659 aa26.9■■□□□ 1.9
SSBP4-209ENST00000601357 DDX20Q9UHI6 824 aaKnown RBP26.9■■□□□ 1.9
SSBP4-209ENST00000601357 ZMYM6O95789 1325 aa26.9■■□□□ 1.9
SSBP4-209ENST00000601357 TRIM6-TRIM34B2RNG4 842 aa26.89■■□□□ 1.9
SSBP4-209ENST00000601357 ATP2A1O14983 1001 aa26.89■■□□□ 1.9
SSBP4-209ENST00000601357 MSCO60682 206 aa26.89■■□□□ 1.9
SSBP4-209ENST00000601357 FGRP09769 529 aa26.89■■□□□ 1.9
SSBP4-209ENST00000601357 NMIQ13287 307 aaPredicted RBP26.89■■□□□ 1.9
SSBP4-209ENST00000601357 ZNF589Q86UQ0 364 aaPredicted RBP26.89■■□□□ 1.9
SSBP4-209ENST00000601357 MMP19Q99542 508 aa26.89■■□□□ 1.9
SSBP4-209ENST00000601357 TEX13BQ9BXU2 312 aa26.89■■□□□ 1.9
SSBP4-209ENST00000601357 PRO3102Q9H379 93 aa26.89■■□□□ 1.9
SSBP4-209ENST00000601357 DNAH12Q6ZR08 3092 aa26.88■■□□□ 1.89
SSBP4-209ENST00000601357 ORC4O43929 436 aa26.88■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms