RNA–Protein interactions for RNA: ENST00000600927.1

ZNF548-211, Transcript of zinc finger protein 548, humanhuman

TSL 3

Gene ZNF548, Length 616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-211ENST00000600927 EMILIN3Q9NT22 766 aa13.45□□□□□ -0.26
ZNF548-211ENST00000600927 ZSWIM5Q9P217 1185 aa13.45□□□□□ -0.26
ZNF548-211ENST00000600927 CPA4Q9UI42 421 aa13.45□□□□□ -0.26
ZNF548-211ENST00000600927 CENPFP49454 3210 aa13.45□□□□□ -0.26
ZNF548-211ENST00000600927 MYH8P13535 1937 aa13.45□□□□□ -0.26
ZNF548-211ENST00000600927 ERICH2A1L162 156 aa13.44□□□□□ -0.26
ZNF548-211ENST00000600927 STX6O43752 255 aa13.44□□□□□ -0.26
ZNF548-211ENST00000600927 AKR1B1P15121 316 aa13.44□□□□□ -0.26
ZNF548-211ENST00000600927 ST3GAL1Q11201 340 aa13.44□□□□□ -0.26
ZNF548-211ENST00000600927 COL9A3Q14050 684 aaPredicted RBP13.44□□□□□ -0.26
ZNF548-211ENST00000600927 TMEM179Q6ZVK1 233 aa13.44□□□□□ -0.26
ZNF548-211ENST00000600927 ACER1Q8TDN7 264 aa13.44□□□□□ -0.26
ZNF548-211ENST00000600927 ARHGAP39Q9C0H5 1083 aa13.44□□□□□ -0.26
ZNF548-211ENST00000600927 CABP5Q9NP86 173 aa13.44□□□□□ -0.26
ZNF548-211ENST00000600927 PNMA3Q9UL41 463 aa13.44□□□□□ -0.26
ZNF548-211ENST00000600927 HPS5Q9UPZ3 1129 aa13.44□□□□□ -0.26
ZNF548-211ENST00000600927 ZDHHC9Q9Y397 364 aa13.44□□□□□ -0.26
ZNF548-211ENST00000600927 TRIM17Q9Y577 477 aa13.44□□□□□ -0.26
ZNF548-211ENST00000600927 BRCA2P51587 3418 aa13.44□□□□□ -0.26
ZNF548-211ENST00000600927 A0A1W2PRG0 241 aa13.43□□□□□ -0.26
ZNF548-211ENST00000600927 B4E1Z4 1266 aa13.43□□□□□ -0.26
ZNF548-211ENST00000600927 SYT1P21579 422 aa13.43□□□□□ -0.26
ZNF548-211ENST00000600927 CTDSPL2Q05D32 466 aa13.43□□□□□ -0.26
ZNF548-211ENST00000600927 APOBRQ0VD83 1088 aa13.43□□□□□ -0.26
ZNF548-211ENST00000600927 SCRN1Q12765 414 aa13.43□□□□□ -0.26
ZNF548-211ENST00000600927 PABPC4Q13310 644 aaKnown RBP eCLIP13.43□□□□□ -0.26
ZNF548-211ENST00000600927 SEPT2Q15019 361 aa13.43□□□□□ -0.26
ZNF548-211ENST00000600927 LARP1BQ659C4 914 aaKnown RBP13.43□□□□□ -0.26
ZNF548-211ENST00000600927 CPLX2Q6PUV4 134 aaKnown RBP13.43□□□□□ -0.26
ZNF548-211ENST00000600927 USP17L2Q6R6M4 530 aa13.43□□□□□ -0.26
ZNF548-211ENST00000600927 SYNE3Q6ZMZ3 975 aa13.43□□□□□ -0.26
ZNF548-211ENST00000600927 CYB5R4Q7L1T6 521 aa13.43□□□□□ -0.26
ZNF548-211ENST00000600927 SIAH1Q8IUQ4 282 aa13.43□□□□□ -0.26
ZNF548-211ENST00000600927 CCDC17Q96LX7 622 aa13.43□□□□□ -0.26
ZNF548-211ENST00000600927 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.43□□□□□ -0.26
ZNF548-211ENST00000600927 ASCC2Q9H1I8 757 aaPredicted RBP13.43□□□□□ -0.26
ZNF548-211ENST00000600927 EFCC1Q9HA90 598 aa13.43□□□□□ -0.26
ZNF548-211ENST00000600927 PTPN22Q9Y2R2 807 aa13.43□□□□□ -0.26
ZNF548-211ENST00000600927 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.43□□□□□ -0.26
ZNF548-211ENST00000600927 NID2Q14112 1375 aa13.43□□□□□ -0.26
ZNF548-211ENST00000600927 NEDD4P46934 1319 aa13.42□□□□□ -0.26
ZNF548-211ENST00000600927 A0A0G2JMZ2 1700 aa13.42□□□□□ -0.26
ZNF548-211ENST00000600927 MINDY4BA8MYZ0 360 aa13.42□□□□□ -0.26
ZNF548-211ENST00000600927 IFIT3O14879 490 aaKnown RBP13.42□□□□□ -0.26
ZNF548-211ENST00000600927 KDM4AO75164 1064 aa13.42□□□□□ -0.26
ZNF548-211ENST00000600927 CDKL5O76039 1030 aa13.42□□□□□ -0.26
ZNF548-211ENST00000600927 BAG4O95429 457 aaKnown RBP13.42□□□□□ -0.26
ZNF548-211ENST00000600927 GNRH1P01148 92 aa13.42□□□□□ -0.26
ZNF548-211ENST00000600927 ZSCAN22P10073 491 aaPredicted RBP13.42□□□□□ -0.26
ZNF548-211ENST00000600927 RASA1P20936 1047 aa13.42□□□□□ -0.26
ZNF548-211ENST00000600927 USP14P54578 494 aa13.42□□□□□ -0.26
ZNF548-211ENST00000600927 FAM110CQ1W6H9 321 aa13.42□□□□□ -0.26
ZNF548-211ENST00000600927 POTEEQ6S8J3 1075 aa13.42□□□□□ -0.26
ZNF548-211ENST00000600927 IQCA1Q86XH1 822 aa13.42□□□□□ -0.26
ZNF548-211ENST00000600927 NECAB1Q8N987 351 aa13.42□□□□□ -0.26
ZNF548-211ENST00000600927 TRIM47Q96LD4 638 aa13.42□□□□□ -0.26
ZNF548-211ENST00000600927 LARP6Q9BRS8 491 aaKnown RBP13.42□□□□□ -0.26
ZNF548-211ENST00000600927 TCP11L1Q9NUJ3 509 aa13.42□□□□□ -0.26
ZNF548-211ENST00000600927 TMOD4Q9NZQ9 345 aa13.42□□□□□ -0.26
ZNF548-211ENST00000600927 PLIN4Q96Q06 1357 aa13.42□□□□□ -0.26
ZNF548-211ENST00000600927 KLF18A0A0U1RQI7 1052 aa13.41□□□□□ -0.26
ZNF548-211ENST00000600927 CCDC196A0A1B0GTZ2 297 aa13.41□□□□□ -0.26
ZNF548-211ENST00000600927 VCAM1P19320 739 aa13.41□□□□□ -0.26
ZNF548-211ENST00000600927 GCLCP48506 637 aaPredicted RBP13.41□□□□□ -0.26
ZNF548-211ENST00000600927 TMEM67Q5HYA8 995 aa13.41□□□□□ -0.26
ZNF548-211ENST00000600927 NSUN7Q8NE18 718 aaKnown RBP13.41□□□□□ -0.26
ZNF548-211ENST00000600927 SMCR8Q8TEV9 937 aaPredicted RBP13.41□□□□□ -0.26
ZNF548-211ENST00000600927 LRRC2Q9BYS8 371 aa13.41□□□□□ -0.26
ZNF548-211ENST00000600927 LY9Q9HBG7 655 aa13.41□□□□□ -0.26
ZNF548-211ENST00000600927 MORF4L1Q9UBU8 362 aa13.41□□□□□ -0.26
ZNF548-211ENST00000600927 MGAMO43451 1857 aa13.4□□□□□ -0.26
ZNF548-211ENST00000600927 IGKV6D-41A0A0C4DH26 115 aa13.4□□□□□ -0.26
ZNF548-211ENST00000600927 CCDC69A6NI79 296 aa13.4□□□□□ -0.26
ZNF548-211ENST00000600927 MPHOSPH10O00566 681 aaKnown RBP13.4□□□□□ -0.26
ZNF548-211ENST00000600927 CALM1P0DP23 149 aa13.4□□□□□ -0.26
ZNF548-211ENST00000600927 CALM2P0DP24 149 aa13.4□□□□□ -0.26
ZNF548-211ENST00000600927 CALM3P0DP25 149 aa13.4□□□□□ -0.26
ZNF548-211ENST00000600927 OSBPP22059 807 aa13.4□□□□□ -0.26
ZNF548-211ENST00000600927 PRMT2P55345 433 aa13.4□□□□□ -0.26
ZNF548-211ENST00000600927 ICA1Q05084 483 aa13.4□□□□□ -0.26
ZNF548-211ENST00000600927 NBR1Q14596 966 aa13.4□□□□□ -0.26
ZNF548-211ENST00000600927 WTAPQ15007 396 aa13.4□□□□□ -0.26
ZNF548-211ENST00000600927 ARHGEF6Q15052 776 aa13.4□□□□□ -0.26
ZNF548-211ENST00000600927 APOA5Q6Q788 366 aa13.4□□□□□ -0.26
ZNF548-211ENST00000600927 LBX2Q6XYB7 198 aa13.4□□□□□ -0.26
ZNF548-211ENST00000600927 CHST3Q7LGC8 479 aa13.4□□□□□ -0.26
ZNF548-211ENST00000600927 CLEC10AQ8IUN9 316 aa13.4□□□□□ -0.26
ZNF548-211ENST00000600927 ANKS1AQ92625 1134 aa13.4□□□□□ -0.26
ZNF548-211ENST00000600927 UBAC1Q9BSL1 405 aa13.4□□□□□ -0.26
ZNF548-211ENST00000600927 ZSCAN16Q9H4T2 348 aaPredicted RBP13.4□□□□□ -0.26
ZNF548-211ENST00000600927 BRPF3Q9ULD4 1205 aa13.4□□□□□ -0.26
ZNF548-211ENST00000600927 TMX2Q9Y320 296 aa13.4□□□□□ -0.26
ZNF548-211ENST00000600927 SLC12A7Q9Y666 1083 aa13.4□□□□□ -0.26
ZNF548-211ENST00000600927 TACC3Q9Y6A5 838 aa13.4□□□□□ -0.26
ZNF548-211ENST00000600927 RLFQ13129 1914 aa13.39□□□□□ -0.27
ZNF548-211ENST00000600927 ZBTB43O43298 467 aa13.39□□□□□ -0.27
ZNF548-211ENST00000600927 CAPN15O75808 1086 aa13.39□□□□□ -0.27
ZNF548-211ENST00000600927 F13A1P00488 732 aa13.39□□□□□ -0.27
ZNF548-211ENST00000600927 PSMC4P43686 418 aa13.39□□□□□ -0.27
ZNF548-211ENST00000600927 HERVK_113P62684 666 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms