RNA–Protein interactions for RNA: ENST00000600791.5

SHKBP1-226, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 494 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-226ENST00000600791 PATL2C9JE40 543 aaKnown RBP17.96■□□□□ 0.47
SHKBP1-226ENST00000600791 APPP05067 770 aa17.96■□□□□ 0.47
SHKBP1-226ENST00000600791 CYP2C19P33261 490 aa17.96■□□□□ 0.47
SHKBP1-226ENST00000600791 TMEM132BQ14DG7 1078 aa17.96■□□□□ 0.47
SHKBP1-226ENST00000600791 FAM83BQ5T0W9 1011 aa17.96■□□□□ 0.47
SHKBP1-226ENST00000600791 DPP9Q86TI2 863 aa17.96■□□□□ 0.47
SHKBP1-226ENST00000600791 NCAPG2Q86XI2 1143 aa17.96■□□□□ 0.47
SHKBP1-226ENST00000600791 IFNL3Q8IZI9 196 aa17.96■□□□□ 0.47
SHKBP1-226ENST00000600791 MROH8Q9H579 483 aa17.96■□□□□ 0.47
SHKBP1-226ENST00000600791 PCDH10Q9P2E7 1040 aa17.96■□□□□ 0.47
SHKBP1-226ENST00000600791 ADAMTS5Q9UNA0 930 aa17.96■□□□□ 0.47
SHKBP1-226ENST00000600791 PRDM1O75626 825 aa17.95■□□□□ 0.46
SHKBP1-226ENST00000600791 COL6A1P12109 1028 aa17.95■□□□□ 0.46
SHKBP1-226ENST00000600791 ZMYM1Q5SVZ6 1142 aa17.95■□□□□ 0.46
SHKBP1-226ENST00000600791 C7orf61Q8IZ16 206 aa17.95■□□□□ 0.46
SHKBP1-226ENST00000600791 YTHDC1Q96MU7 727 aaKnown RBP17.95■□□□□ 0.46
SHKBP1-226ENST00000600791 NYAP2Q9P242 653 aa17.95■□□□□ 0.46
SHKBP1-226ENST00000600791 PPP1R9AQ9ULJ8 1098 aa17.95■□□□□ 0.46
SHKBP1-226ENST00000600791 MYH4Q9Y623 1939 aa17.95■□□□□ 0.46
SHKBP1-226ENST00000600791 DNAH12Q6ZR08 3092 aa17.94■□□□□ 0.46
SHKBP1-226ENST00000600791 IGKV6D-41A0A0C4DH26 115 aa17.94■□□□□ 0.46
SHKBP1-226ENST00000600791 COBLO75128 1261 aa17.94■□□□□ 0.46
SHKBP1-226ENST00000600791 CYBAP13498 195 aa17.94■□□□□ 0.46
SHKBP1-226ENST00000600791 HDAC1Q13547 482 aaPredicted RBP17.94■□□□□ 0.46
SHKBP1-226ENST00000600791 ANKRD45Q5TZF3 282 aa17.94■□□□□ 0.46
SHKBP1-226ENST00000600791 OLFML2BQ68BL8 750 aa17.94■□□□□ 0.46
SHKBP1-226ENST00000600791 ABRAQ8N0Z2 381 aa17.94■□□□□ 0.46
SHKBP1-226ENST00000600791 TRPV1Q8NER1 839 aa17.94■□□□□ 0.46
SHKBP1-226ENST00000600791 NUP88Q99567 741 aaPredicted RBP17.94■□□□□ 0.46
SHKBP1-226ENST00000600791 NACAP1Q9BZK3 213 aa17.94■□□□□ 0.46
SHKBP1-226ENST00000600791 ZNF287Q9HBT7 754 aa17.94■□□□□ 0.46
SHKBP1-226ENST00000600791 DDX20Q9UHI6 824 aaKnown RBP17.94■□□□□ 0.46
SHKBP1-226ENST00000600791 VWA5AO00534 786 aa17.93■□□□□ 0.46
SHKBP1-226ENST00000600791 SLC25A27O95847 323 aa17.93■□□□□ 0.46
SHKBP1-226ENST00000600791 CNGA1P29973 690 aa17.93■□□□□ 0.46
SHKBP1-226ENST00000600791 ZBTB47Q9UFB7 747 aaPredicted RBP17.93■□□□□ 0.46
SHKBP1-226ENST00000600791 ZNF214Q9UL59 606 aaPredicted RBP17.93■□□□□ 0.46
SHKBP1-226ENST00000600791 PLIN4Q96Q06 1357 aa17.92■□□□□ 0.46
SHKBP1-226ENST00000600791 F5H6K3 240 aa17.92■□□□□ 0.46
SHKBP1-226ENST00000600791 MSCO60682 206 aa17.92■□□□□ 0.46
SHKBP1-226ENST00000600791 NDUFB10O96000 172 aa17.92■□□□□ 0.46
SHKBP1-226ENST00000600791 FCER1AP12319 257 aa17.92■□□□□ 0.46
SHKBP1-226ENST00000600791 KLRC3Q07444 240 aa17.92■□□□□ 0.46
SHKBP1-226ENST00000600791 RIOX2Q8IUF8 465 aa17.92■□□□□ 0.46
SHKBP1-226ENST00000600791 ZNF444Q8N0Y2 327 aaPredicted RBP17.92■□□□□ 0.46
SHKBP1-226ENST00000600791 REPS2Q8NFH8 660 aa17.92■□□□□ 0.46
SHKBP1-226ENST00000600791 CEP95Q96GE4 821 aa17.92■□□□□ 0.46
SHKBP1-226ENST00000600791 SLF1Q9BQI6 1058 aa17.92■□□□□ 0.46
SHKBP1-226ENST00000600791 NAPBQ9H115 298 aa17.92■□□□□ 0.46
SHKBP1-226ENST00000600791 SLC5A4Q9NY91 659 aa17.92■□□□□ 0.46
SHKBP1-226ENST00000600791 CLIP2Q9UDT6 1046 aa17.92■□□□□ 0.46
SHKBP1-226ENST00000600791 ZMYND8Q9ULU4 1186 aaPredicted RBP17.92■□□□□ 0.46
SHKBP1-226ENST00000600791 ZNFX1Q9P2E3 1918 aaKnown RBP17.92■□□□□ 0.46
SHKBP1-226ENST00000600791 FOXP2O15409 715 aa17.91■□□□□ 0.46
SHKBP1-226ENST00000600791 STAT3P40763 770 aa17.91■□□□□ 0.46
SHKBP1-226ENST00000600791 PPARAQ07869 468 aa17.91■□□□□ 0.46
SHKBP1-226ENST00000600791 CCDC129Q6ZRS4 1044 aa17.91■□□□□ 0.46
SHKBP1-226ENST00000600791 MAML3Q96JK9 1138 aa17.91■□□□□ 0.46
SHKBP1-226ENST00000600791 MTMR4Q9NYA4 1195 aa17.91■□□□□ 0.46
SHKBP1-226ENST00000600791 STAP2Q9UGK3 403 aa17.91■□□□□ 0.46
SHKBP1-226ENST00000600791 PLXNA1Q9UIW2 1896 aa17.9■□□□□ 0.46
SHKBP1-226ENST00000600791 PDE1AP54750 535 aa17.9■□□□□ 0.46
SHKBP1-226ENST00000600791 PDE4BQ07343 736 aa17.9■□□□□ 0.46
SHKBP1-226ENST00000600791 LRRC47Q8N1G4 583 aaKnown RBP17.9■□□□□ 0.46
SHKBP1-226ENST00000600791 EVI5LQ96CN4 794 aa17.9■□□□□ 0.46
SHKBP1-226ENST00000600791 MMP19Q99542 508 aa17.9■□□□□ 0.46
SHKBP1-226ENST00000600791 A0A1W2PPC1 479 aa17.89■□□□□ 0.45
SHKBP1-226ENST00000600791 TTLL1O95922 423 aa17.89■□□□□ 0.45
SHKBP1-226ENST00000600791 SLC3A2P08195 630 aaKnown RBP17.89■□□□□ 0.45
SHKBP1-226ENST00000600791 TSPY3P0CV98 308 aa17.89■□□□□ 0.45
SHKBP1-226ENST00000600791 TSPY8P0CW00 308 aa17.89■□□□□ 0.45
SHKBP1-226ENST00000600791 SYN1P17600 705 aa17.89■□□□□ 0.45
SHKBP1-226ENST00000600791 COPB2P35606 906 aa17.89■□□□□ 0.45
SHKBP1-226ENST00000600791 LRRC26Q2I0M4 334 aa17.89■□□□□ 0.45
SHKBP1-226ENST00000600791 FAM47AQ5JRC9 791 aa17.89■□□□□ 0.45
SHKBP1-226ENST00000600791 NEDD1Q8NHV4 660 aa17.89■□□□□ 0.45
SHKBP1-226ENST00000600791 MKL1Q969V6 931 aa17.89■□□□□ 0.45
SHKBP1-226ENST00000600791 GDF15Q99988 308 aa17.89■□□□□ 0.45
SHKBP1-226ENST00000600791 SYNPO2Q9UMS6 1093 aa17.89■□□□□ 0.45
SHKBP1-226ENST00000600791 DNM1LO00429 736 aa17.88■□□□□ 0.45
SHKBP1-226ENST00000600791 SEPT4O43236 478 aa17.88■□□□□ 0.45
SHKBP1-226ENST00000600791 PGK2P07205 417 aa17.88■□□□□ 0.45
SHKBP1-226ENST00000600791 KCTD2Q14681 263 aa17.88■□□□□ 0.45
SHKBP1-226ENST00000600791 VPS53Q5VIR6 699 aa17.88■□□□□ 0.45
SHKBP1-226ENST00000600791 PRPF38AQ8NAV1 312 aaKnown RBP17.88■□□□□ 0.45
SHKBP1-226ENST00000600791 GMCL1P1Q8NEA9 526 aa17.88■□□□□ 0.45
SHKBP1-226ENST00000600791 TEX13BQ9BXU2 312 aa17.88■□□□□ 0.45
SHKBP1-226ENST00000600791 TFAP4Q01664 338 aa17.87■□□□□ 0.45
SHKBP1-226ENST00000600791 ZNF792Q3KQV3 632 aa17.87■□□□□ 0.45
SHKBP1-226ENST00000600791 PRAMEF19Q5SWL8 479 aa17.87■□□□□ 0.45
SHKBP1-226ENST00000600791 ANO1Q5XXA6 986 aa17.87■□□□□ 0.45
SHKBP1-226ENST00000600791 SNRNP48Q6IEG0 339 aaKnown RBP17.87■□□□□ 0.45
SHKBP1-226ENST00000600791 LNPKQ9C0E8 428 aa17.87■□□□□ 0.45
SHKBP1-226ENST00000600791 SENP6Q9GZR1 1112 aaPredicted RBP17.87■□□□□ 0.45
SHKBP1-226ENST00000600791 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.87■□□□□ 0.45
SHKBP1-226ENST00000600791 AAMPQ13685 434 aa17.86■□□□□ 0.45
SHKBP1-226ENST00000600791 GJC2Q5T442 439 aaPredicted RBP17.86■□□□□ 0.45
SHKBP1-226ENST00000600791 KIFC2Q96AC6 838 aa17.86■□□□□ 0.45
SHKBP1-226ENST00000600791 DIS3Q9Y2L1 958 aaKnown RBP17.86■□□□□ 0.45
SHKBP1-226ENST00000600791 RIPK3Q9Y572 518 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms