RNA–Protein interactions for RNA: ENST00000600552.5

SHKBP1-223, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-223ENST00000600552 FCER1AP12319 257 aa21.05■□□□□ 0.96
SHKBP1-223ENST00000600552 TDO2P48775 406 aa21.05■□□□□ 0.96
SHKBP1-223ENST00000600552 FRMPD3Q5JV73 1810 aa21.05■□□□□ 0.96
SHKBP1-223ENST00000600552 ZNFX1Q9P2E3 1918 aaKnown RBP21.04■□□□□ 0.96
SHKBP1-223ENST00000600552 RANBP2P49792 3224 aaKnown RBP21.04■□□□□ 0.96
SHKBP1-223ENST00000600552 M0R2C6 588 aa21.04■□□□□ 0.96
SHKBP1-223ENST00000600552 MSCO60682 206 aa21.04■□□□□ 0.96
SHKBP1-223ENST00000600552 PGK2P07205 417 aa21.04■□□□□ 0.96
SHKBP1-223ENST00000600552 CYBAP13498 195 aa21.04■□□□□ 0.96
SHKBP1-223ENST00000600552 OLFML2BQ68BL8 750 aa21.04■□□□□ 0.96
SHKBP1-223ENST00000600552 APPBP2Q92624 585 aa21.04■□□□□ 0.96
SHKBP1-223ENST00000600552 MMP19Q99542 508 aa21.04■□□□□ 0.96
SHKBP1-223ENST00000600552 COL11A1P12107 1806 aaPredicted RBP21.04■□□□□ 0.96
SHKBP1-223ENST00000600552 GPAA1O43292 621 aa21.03■□□□□ 0.96
SHKBP1-223ENST00000600552 PRDM1O75626 825 aa21.03■□□□□ 0.96
SHKBP1-223ENST00000600552 BMP8BP34820 402 aa21.03■□□□□ 0.96
SHKBP1-223ENST00000600552 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.03■□□□□ 0.96
SHKBP1-223ENST00000600552 SLC25A27O95847 323 aa21.02■□□□□ 0.96
SHKBP1-223ENST00000600552 RASA1P20936 1047 aa21.02■□□□□ 0.96
SHKBP1-223ENST00000600552 STAT3P40763 770 aa21.02■□□□□ 0.96
SHKBP1-223ENST00000600552 SBK1Q52WX2 424 aa21.02■□□□□ 0.96
SHKBP1-223ENST00000600552 ZNF444Q8N0Y2 327 aaPredicted RBP21.02■□□□□ 0.96
SHKBP1-223ENST00000600552 ARRDC4Q8NCT1 418 aa21.02■□□□□ 0.96
SHKBP1-223ENST00000600552 CHMP4CQ96CF2 233 aa21.02■□□□□ 0.96
SHKBP1-223ENST00000600552 CLIP2Q9UDT6 1046 aa21.02■□□□□ 0.96
SHKBP1-223ENST00000600552 ISY1Q9ULR0 285 aaKnown RBP21.02■□□□□ 0.96
SHKBP1-223ENST00000600552 ATP11BQ9Y2G3 1177 aa21.02■□□□□ 0.96
SHKBP1-223ENST00000600552 KBTBD13C9JR72 458 aa21.01■□□□□ 0.95
SHKBP1-223ENST00000600552 VWA5AO00534 786 aa21.01■□□□□ 0.95
SHKBP1-223ENST00000600552 KCTD2Q14681 263 aa21.01■□□□□ 0.95
SHKBP1-223ENST00000600552 OTUD7AQ8TE49 926 aaPredicted RBP21.01■□□□□ 0.95
SHKBP1-223ENST00000600552 FERMT2Q96AC1 680 aa21.01■□□□□ 0.95
SHKBP1-223ENST00000600552 MAML3Q96JK9 1138 aa21.01■□□□□ 0.95
SHKBP1-223ENST00000600552 SEC62Q99442 399 aaKnown RBP21.01■□□□□ 0.95
SHKBP1-223ENST00000600552 LBHD1Q9BQE6 289 aaPredicted RBP21.01■□□□□ 0.95
SHKBP1-223ENST00000600552 PPP1R9AQ9ULJ8 1098 aa21.01■□□□□ 0.95
SHKBP1-223ENST00000600552 CTDP1Q9Y5B0 961 aaPredicted RBP21.01■□□□□ 0.95
SHKBP1-223ENST00000600552 PCDHB15Q9Y5E8 787 aa21.01■□□□□ 0.95
SHKBP1-223ENST00000600552 A0A0G2JMZ2 1700 aa21.01■□□□□ 0.95
SHKBP1-223ENST00000600552 DNM1LO00429 736 aa21■□□□□ 0.95
SHKBP1-223ENST00000600552 SEPT4O43236 478 aa21■□□□□ 0.95
SHKBP1-223ENST00000600552 ZFYP08048 801 aaPredicted RBP21■□□□□ 0.95
SHKBP1-223ENST00000600552 RTP1P59025 263 aa21■□□□□ 0.95
SHKBP1-223ENST00000600552 TDHQ8IZJ6 230 aa21■□□□□ 0.95
SHKBP1-223ENST00000600552 ABRAQ8N0Z2 381 aa21■□□□□ 0.95
SHKBP1-223ENST00000600552 FSD1Q9BTV5 496 aa21■□□□□ 0.95
SHKBP1-223ENST00000600552 EPB41L4AQ9HCS5 686 aaPredicted RBP21■□□□□ 0.95
SHKBP1-223ENST00000600552 PRKAG2Q9UGJ0 569 aa21■□□□□ 0.95
SHKBP1-223ENST00000600552 PARP14Q460N5 1801 aa20.99■□□□□ 0.95
SHKBP1-223ENST00000600552 F5H6K3 240 aa20.99■□□□□ 0.95
SHKBP1-223ENST00000600552 KLRC3Q07444 240 aa20.99■□□□□ 0.95
SHKBP1-223ENST00000600552 GIMAP6Q6P9H5 292 aa20.99■□□□□ 0.95
SHKBP1-223ENST00000600552 RIOX2Q8IUF8 465 aa20.99■□□□□ 0.95
SHKBP1-223ENST00000600552 CPXCR1Q8N123 301 aa20.99■□□□□ 0.95
SHKBP1-223ENST00000600552 SLF1Q9BQI6 1058 aa20.99■□□□□ 0.95
SHKBP1-223ENST00000600552 PRDM5Q9NQX1 630 aaPredicted RBP20.99■□□□□ 0.95
SHKBP1-223ENST00000600552 ZBTB47Q9UFB7 747 aaPredicted RBP20.99■□□□□ 0.95
SHKBP1-223ENST00000600552 SZT2Q5T011 3432 aa20.99■□□□□ 0.95
SHKBP1-223ENST00000600552 PATL2C9JE40 543 aaKnown RBP20.98■□□□□ 0.95
SHKBP1-223ENST00000600552 ERC2O15083 957 aa20.98■□□□□ 0.95
SHKBP1-223ENST00000600552 NDUFB10O96000 172 aa20.98■□□□□ 0.95
SHKBP1-223ENST00000600552 GNAT2P19087 354 aa20.98■□□□□ 0.95
SHKBP1-223ENST00000600552 ADCYAP1R1P41586 468 aa20.98■□□□□ 0.95
SHKBP1-223ENST00000600552 LRRFIP1Q32MZ4 808 aaKnown RBP20.98■□□□□ 0.95
SHKBP1-223ENST00000600552 SNRNP48Q6IEG0 339 aaKnown RBP20.98■□□□□ 0.95
SHKBP1-223ENST00000600552 Q7L0L9 218 aa20.98■□□□□ 0.95
SHKBP1-223ENST00000600552 IFNL3Q8IZI9 196 aa20.98■□□□□ 0.95
SHKBP1-223ENST00000600552 KIFC2Q96AC6 838 aa20.98■□□□□ 0.95
SHKBP1-223ENST00000600552 NYAP2Q9P242 653 aa20.98■□□□□ 0.95
SHKBP1-223ENST00000600552 ADAMTS5Q9UNA0 930 aa20.98■□□□□ 0.95
SHKBP1-223ENST00000600552 SMCHD1A6NHR9 2005 aa20.98■□□□□ 0.95
SHKBP1-223ENST00000600552 ZNF236Q9UL36 1845 aa20.97■□□□□ 0.95
SHKBP1-223ENST00000600552 IGHA2P01877 340 aa20.97■□□□□ 0.95
SHKBP1-223ENST00000600552 TAL1P17542 331 aaPredicted RBP20.97■□□□□ 0.95
SHKBP1-223ENST00000600552 FAM47AQ5JRC9 791 aa20.97■□□□□ 0.95
SHKBP1-223ENST00000600552 LRRC47Q8N1G4 583 aaKnown RBP20.97■□□□□ 0.95
SHKBP1-223ENST00000600552 DEFB123Q8N688 67 aa20.97■□□□□ 0.95
SHKBP1-223ENST00000600552 NACAP1Q9BZK3 213 aa20.97■□□□□ 0.95
SHKBP1-223ENST00000600552 ZBED4O75132 1171 aa20.96■□□□□ 0.95
SHKBP1-223ENST00000600552 SLC39A5Q6ZMH5 540 aa20.96■□□□□ 0.95
SHKBP1-223ENST00000600552 DDX11Q96FC9 970 aa20.96■□□□□ 0.95
SHKBP1-223ENST00000600552 CEP95Q96GE4 821 aa20.96■□□□□ 0.95
SHKBP1-223ENST00000600552 TINF2Q9BSI4 451 aa20.96■□□□□ 0.95
SHKBP1-223ENST00000600552 NAPBQ9H115 298 aa20.96■□□□□ 0.95
SHKBP1-223ENST00000600552 ZNF287Q9HBT7 754 aa20.96■□□□□ 0.95
SHKBP1-223ENST00000600552 ZNF214Q9UL59 606 aaPredicted RBP20.96■□□□□ 0.95
SHKBP1-223ENST00000600552 TTC41PQ6P2S7 1318 aa20.96■□□□□ 0.95
SHKBP1-223ENST00000600552 RARBP10826 455 aa20.95■□□□□ 0.94
SHKBP1-223ENST00000600552 LRRC41Q15345 812 aa20.95■□□□□ 0.94
SHKBP1-223ENST00000600552 REPS2Q8NFH8 660 aa20.95■□□□□ 0.94
SHKBP1-223ENST00000600552 RAVER2Q9HCJ3 691 aaKnown RBP20.95■□□□□ 0.94
SHKBP1-223ENST00000600552 MYH4Q9Y623 1939 aa20.95■□□□□ 0.94
SHKBP1-223ENST00000600552 PLXNA1Q9UIW2 1896 aa20.94■□□□□ 0.94
SHKBP1-223ENST00000600552 PGK1P00558 417 aa20.94■□□□□ 0.94
SHKBP1-223ENST00000600552 TSPY3P0CV98 308 aa20.94■□□□□ 0.94
SHKBP1-223ENST00000600552 TSPY8P0CW00 308 aa20.94■□□□□ 0.94
SHKBP1-223ENST00000600552 COPB2P35606 906 aa20.94■□□□□ 0.94
SHKBP1-223ENST00000600552 ZNF792Q3KQV3 632 aa20.94■□□□□ 0.94
SHKBP1-223ENST00000600552 TRIM60Q495X7 471 aa20.94■□□□□ 0.94
SHKBP1-223ENST00000600552 ANKRD45Q5TZF3 282 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms