RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 TDO2P48775 406 aa22.4■■□□□ 1.18
PNKP-213ENST00000599543 STK11IPQ8N1F8 1099 aa22.4■■□□□ 1.18
PNKP-213ENST00000599543 MKNK2Q9HBH9 465 aa22.4■■□□□ 1.18
PNKP-213ENST00000599543 SLC5A4Q9NY91 659 aa22.4■■□□□ 1.18
PNKP-213ENST00000599543 A0A1W2PPC1 479 aa22.39■■□□□ 1.17
PNKP-213ENST00000599543 STAP2Q9UGK3 403 aa22.39■■□□□ 1.17
PNKP-213ENST00000599543 DDX20Q9UHI6 824 aaKnown RBP22.39■■□□□ 1.17
PNKP-213ENST00000599543 ZMYND8Q9ULU4 1186 aaPredicted RBP22.39■■□□□ 1.17
PNKP-213ENST00000599543 M0R2C6 588 aa22.38■■□□□ 1.17
PNKP-213ENST00000599543 APPP05067 770 aa22.38■■□□□ 1.17
PNKP-213ENST00000599543 OLFML2BQ68BL8 750 aa22.38■■□□□ 1.17
PNKP-213ENST00000599543 PLXNA1Q9UIW2 1896 aa22.38■■□□□ 1.17
PNKP-213ENST00000599543 COL6A1P12109 1028 aa22.37■■□□□ 1.17
PNKP-213ENST00000599543 RASA1P20936 1047 aa22.37■■□□□ 1.17
PNKP-213ENST00000599543 ABRAQ8N0Z2 381 aa22.37■■□□□ 1.17
PNKP-213ENST00000599543 ZNF287Q9HBT7 754 aa22.37■■□□□ 1.17
PNKP-213ENST00000599543 EPB41L4AQ9HCS5 686 aaPredicted RBP22.37■■□□□ 1.17
PNKP-213ENST00000599543 SLC25A27O95847 323 aa22.36■■□□□ 1.17
PNKP-213ENST00000599543 FCER1AP12319 257 aa22.36■■□□□ 1.17
PNKP-213ENST00000599543 CYBAP13498 195 aa22.36■■□□□ 1.17
PNKP-213ENST00000599543 TMEM132BQ14DG7 1078 aa22.36■■□□□ 1.17
PNKP-213ENST00000599543 FAM83BQ5T0W9 1011 aa22.36■■□□□ 1.17
PNKP-213ENST00000599543 PI4K2BQ8TCG2 481 aa22.36■■□□□ 1.17
PNKP-213ENST00000599543 FSD1Q9BTV5 496 aa22.36■■□□□ 1.17
PNKP-213ENST00000599543 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.36■■□□□ 1.17
PNKP-213ENST00000599543 FBXO28Q9NVF7 368 aa22.36■■□□□ 1.17
PNKP-213ENST00000599543 ZBTB47Q9UFB7 747 aaPredicted RBP22.36■■□□□ 1.17
PNKP-213ENST00000599543 COBLO75128 1261 aa22.35■■□□□ 1.17
PNKP-213ENST00000599543 SYN1P17600 705 aa22.35■■□□□ 1.17
PNKP-213ENST00000599543 MX1P20591 662 aa22.35■■□□□ 1.17
PNKP-213ENST00000599543 OTUD7AQ8TE49 926 aaPredicted RBP22.35■■□□□ 1.17
PNKP-213ENST00000599543 NACAP1Q9BZK3 213 aa22.35■■□□□ 1.17
PNKP-213ENST00000599543 PPP1R9AQ9ULJ8 1098 aa22.35■■□□□ 1.17
PNKP-213ENST00000599543 ADAMTS5Q9UNA0 930 aa22.35■■□□□ 1.17
PNKP-213ENST00000599543 PATL2C9JE40 543 aaKnown RBP22.34■■□□□ 1.17
PNKP-213ENST00000599543 VWA5AO00534 786 aa22.34■■□□□ 1.17
PNKP-213ENST00000599543 IGHA2P01877 340 aa22.34■■□□□ 1.17
PNKP-213ENST00000599543 TRPV1Q8NER1 839 aa22.34■■□□□ 1.17
PNKP-213ENST00000599543 NYAP2Q9P242 653 aa22.34■■□□□ 1.17
PNKP-213ENST00000599543 IGHDP01880 384 aa22.33■■□□□ 1.17
PNKP-213ENST00000599543 LRRC26Q2I0M4 334 aa22.33■■□□□ 1.17
PNKP-213ENST00000599543 RIOX2Q8IUF8 465 aa22.33■■□□□ 1.17
PNKP-213ENST00000599543 IFNL3Q8IZI9 196 aa22.33■■□□□ 1.17
PNKP-213ENST00000599543 ZNF444Q8N0Y2 327 aaPredicted RBP22.33■■□□□ 1.17
PNKP-213ENST00000599543 MMP19Q99542 508 aa22.33■■□□□ 1.17
PNKP-213ENST00000599543 GDF15Q99988 308 aa22.33■■□□□ 1.17
PNKP-213ENST00000599543 DNM1LO00429 736 aa22.32■■□□□ 1.16
PNKP-213ENST00000599543 PRDM1O75626 825 aa22.32■■□□□ 1.16
PNKP-213ENST00000599543 BMP8BP34820 402 aa22.32■■□□□ 1.16
PNKP-213ENST00000599543 COPB2P35606 906 aa22.32■■□□□ 1.16
PNKP-213ENST00000599543 STAT3P40763 770 aa22.32■■□□□ 1.16
PNKP-213ENST00000599543 KCTD2Q14681 263 aa22.32■■□□□ 1.16
PNKP-213ENST00000599543 MAML3Q96JK9 1138 aa22.32■■□□□ 1.16
PNKP-213ENST00000599543 SEC62Q99442 399 aaKnown RBP22.32■■□□□ 1.16
PNKP-213ENST00000599543 NUP88Q99567 741 aaPredicted RBP22.32■■□□□ 1.16
PNKP-213ENST00000599543 SLF1Q9BQI6 1058 aa22.32■■□□□ 1.16
PNKP-213ENST00000599543 SENP6Q9GZR1 1112 aaPredicted RBP22.32■■□□□ 1.16
PNKP-213ENST00000599543 F5H6K3 240 aa22.31■■□□□ 1.16
PNKP-213ENST00000599543 SLC3A2P08195 630 aaKnown RBP22.31■■□□□ 1.16
PNKP-213ENST00000599543 KLRC3Q07444 240 aa22.31■■□□□ 1.16
PNKP-213ENST00000599543 HDAC1Q13547 482 aaPredicted RBP22.31■■□□□ 1.16
PNKP-213ENST00000599543 NAPBQ9H115 298 aa22.31■■□□□ 1.16
PNKP-213ENST00000599543 CLIP2Q9UDT6 1046 aa22.31■■□□□ 1.16
PNKP-213ENST00000599543 ZNF214Q9UL59 606 aaPredicted RBP22.31■■□□□ 1.16
PNKP-213ENST00000599543 SEPT4O43236 478 aa22.3■■□□□ 1.16
PNKP-213ENST00000599543 NDUFB10O96000 172 aa22.3■■□□□ 1.16
PNKP-213ENST00000599543 MAGEA10P43363 369 aaPredicted RBP22.3■■□□□ 1.16
PNKP-213ENST00000599543 PDE4BQ07343 736 aa22.3■■□□□ 1.16
PNKP-213ENST00000599543 ZMYM1Q5SVZ6 1142 aa22.3■■□□□ 1.16
PNKP-213ENST00000599543 ARRDC4Q8NCT1 418 aa22.3■■□□□ 1.16
PNKP-213ENST00000599543 CEP95Q96GE4 821 aa22.3■■□□□ 1.16
PNKP-213ENST00000599543 SMCHD1A6NHR9 2005 aa22.3■■□□□ 1.16
PNKP-213ENST00000599543 IGKV6D-41A0A0C4DH26 115 aa22.29■■□□□ 1.16
PNKP-213ENST00000599543 PGK2P07205 417 aa22.29■■□□□ 1.16
PNKP-213ENST00000599543 TSPY3P0CV98 308 aa22.29■■□□□ 1.16
PNKP-213ENST00000599543 TSPY8P0CW00 308 aa22.29■■□□□ 1.16
PNKP-213ENST00000599543 ANKRD45Q5TZF3 282 aa22.29■■□□□ 1.16
PNKP-213ENST00000599543 ANO1Q5XXA6 986 aa22.29■■□□□ 1.16
PNKP-213ENST00000599543 B4GALNT3Q6L9W6 998 aa22.29■■□□□ 1.16
PNKP-213ENST00000599543 REPS2Q8NFH8 660 aa22.29■■□□□ 1.16
PNKP-213ENST00000599543 TEX13BQ9BXU2 312 aa22.29■■□□□ 1.16
PNKP-213ENST00000599543 PLIN4Q96Q06 1357 aa22.28■■□□□ 1.16
PNKP-213ENST00000599543 KBTBD13C9JR72 458 aa22.28■■□□□ 1.16
PNKP-213ENST00000599543 TTLL1O95922 423 aa22.28■■□□□ 1.16
PNKP-213ENST00000599543 MYCNP04198 464 aaPredicted RBP22.28■■□□□ 1.16
PNKP-213ENST00000599543 AAMPQ13685 434 aa22.28■■□□□ 1.16
PNKP-213ENST00000599543 PRAMEF19Q5SWL8 479 aa22.28■■□□□ 1.16
PNKP-213ENST00000599543 GJC2Q5T442 439 aaPredicted RBP22.28■■□□□ 1.16
PNKP-213ENST00000599543 PRPF38AQ8NAV1 312 aaKnown RBP22.28■■□□□ 1.16
PNKP-213ENST00000599543 RWDD1Q9H446 243 aaPredicted RBP22.28■■□□□ 1.16
PNKP-213ENST00000599543 MTMR4Q9NYA4 1195 aa22.28■■□□□ 1.16
PNKP-213ENST00000599543 SYNPO2Q9UMS6 1093 aa22.28■■□□□ 1.16
PNKP-213ENST00000599543 CTDP1Q9Y5B0 961 aaPredicted RBP22.28■■□□□ 1.16
PNKP-213ENST00000599543 SALL3Q9BXA9 1300 aa22.28■■□□□ 1.16
PNKP-213ENST00000599543 ATN1P54259 1190 aaPredicted RBP22.27■■□□□ 1.16
PNKP-213ENST00000599543 PPARAQ07869 468 aa22.27■■□□□ 1.16
PNKP-213ENST00000599543 SNRNP48Q6IEG0 339 aaKnown RBP22.27■■□□□ 1.16
PNKP-213ENST00000599543 LRRC47Q8N1G4 583 aaKnown RBP22.27■■□□□ 1.16
PNKP-213ENST00000599543 MKL1Q969V6 931 aa22.27■■□□□ 1.16
PNKP-213ENST00000599543 UBE2OQ9C0C9 1292 aaKnown RBP22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms