RNA–Protein interactions for RNA: ENST00000599165.5

LIG1-217, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-217ENST00000599165 HOXC10Q9NYD6 342 aa14.48□□□□□ -0.09
LIG1-217ENST00000599165 FLRT1Q9NZU1 646 aa14.48□□□□□ -0.09
LIG1-217ENST00000599165 ANAPC4Q9UJX5 808 aa14.48□□□□□ -0.09
LIG1-217ENST00000599165 TRIM6-TRIM34B2RNG4 842 aa14.47□□□□□ -0.09
LIG1-217ENST00000599165 F5H6K3 240 aa14.47□□□□□ -0.09
LIG1-217ENST00000599165 SGPL1O95470 568 aa14.47□□□□□ -0.09
LIG1-217ENST00000599165 FGAP02671 866 aa14.47□□□□□ -0.09
LIG1-217ENST00000599165 HSPD1P10809 573 aaKnown RBP14.47□□□□□ -0.09
LIG1-217ENST00000599165 GSPT1P15170 499 aaKnown RBP14.47□□□□□ -0.09
LIG1-217ENST00000599165 KLRC3Q07444 240 aa14.47□□□□□ -0.09
LIG1-217ENST00000599165 MAP2K5Q13163 448 aa14.47□□□□□ -0.09
LIG1-217ENST00000599165 TMEM132BQ14DG7 1078 aa14.47□□□□□ -0.09
LIG1-217ENST00000599165 NPLOC4Q8TAT6 608 aa14.47□□□□□ -0.09
LIG1-217ENST00000599165 RILPL2Q969X0 211 aa14.47□□□□□ -0.09
LIG1-217ENST00000599165 SPATC1LQ9H0A9 340 aa14.47□□□□□ -0.09
LIG1-217ENST00000599165 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.47□□□□□ -0.09
LIG1-217ENST00000599165 IL17RBQ9NRM6 502 aa14.47□□□□□ -0.09
LIG1-217ENST00000599165 PLXNA1Q9UIW2 1896 aa14.46□□□□□ -0.09
LIG1-217ENST00000599165 ZMYM6O95789 1325 aa14.46□□□□□ -0.09
LIG1-217ENST00000599165 CCDC171Q6TFL3 1326 aa14.46□□□□□ -0.09
LIG1-217ENST00000599165 NMT2O60551 498 aa14.46□□□□□ -0.09
LIG1-217ENST00000599165 NOVP48745 357 aa14.46□□□□□ -0.09
LIG1-217ENST00000599165 MNX1P50219 401 aaPredicted RBP14.46□□□□□ -0.09
LIG1-217ENST00000599165 CCNA1P78396 465 aa14.46□□□□□ -0.09
LIG1-217ENST00000599165 TFAP4Q01664 338 aa14.46□□□□□ -0.09
LIG1-217ENST00000599165 RASGRP2Q7LDG7 609 aa14.46□□□□□ -0.09
LIG1-217ENST00000599165 ZNF444Q8N0Y2 327 aaPredicted RBP14.46□□□□□ -0.09
LIG1-217ENST00000599165 LRRC47Q8N1G4 583 aaKnown RBP14.46□□□□□ -0.09
LIG1-217ENST00000599165 DEFB118Q96PH6 123 aa14.46□□□□□ -0.09
LIG1-217ENST00000599165 APBA2Q99767 749 aa14.46□□□□□ -0.09
LIG1-217ENST00000599165 GOPCQ9HD26 462 aa14.46□□□□□ -0.09
LIG1-217ENST00000599165 CLIP2Q9UDT6 1046 aa14.46□□□□□ -0.09
LIG1-217ENST00000599165 ZNF214Q9UL59 606 aaPredicted RBP14.46□□□□□ -0.09
LIG1-217ENST00000599165 PPP1R9AQ9ULJ8 1098 aa14.46□□□□□ -0.09
LIG1-217ENST00000599165 SMCHD1A6NHR9 2005 aa14.45□□□□□ -0.1
LIG1-217ENST00000599165 SLC15A5A6NIM6 579 aa14.45□□□□□ -0.1
LIG1-217ENST00000599165 VWA5AO00534 786 aa14.45□□□□□ -0.1
LIG1-217ENST00000599165 ORC4O43929 436 aa14.45□□□□□ -0.1
LIG1-217ENST00000599165 HOXC6P09630 235 aa14.45□□□□□ -0.1
LIG1-217ENST00000599165 ERCC3P19447 782 aa14.45□□□□□ -0.1
LIG1-217ENST00000599165 RGS2P41220 211 aa14.45□□□□□ -0.1
LIG1-217ENST00000599165 CACNB2Q08289 660 aaPredicted RBP14.45□□□□□ -0.1
LIG1-217ENST00000599165 PRPF38BQ5VTL8 546 aaKnown RBP14.45□□□□□ -0.1
LIG1-217ENST00000599165 MB21D1Q8N884 522 aa14.45□□□□□ -0.1
LIG1-217ENST00000599165 SHCBP1Q8NEM2 672 aa14.45□□□□□ -0.1
LIG1-217ENST00000599165 RPTORQ8N122 1335 aa14.44□□□□□ -0.1
LIG1-217ENST00000599165 COBLO75128 1261 aa14.44□□□□□ -0.1
LIG1-217ENST00000599165 TTLL1O95922 423 aa14.44□□□□□ -0.1
LIG1-217ENST00000599165 PRKAR2AP13861 404 aaKnown RBP14.44□□□□□ -0.1
LIG1-217ENST00000599165 CCND3P30281 292 aaPredicted RBP14.44□□□□□ -0.1
LIG1-217ENST00000599165 PDE4BQ07343 736 aa14.44□□□□□ -0.1
LIG1-217ENST00000599165 TBC1D10CQ8IV04 446 aa14.44□□□□□ -0.1
LIG1-217ENST00000599165 GMCL1P1Q8NEA9 526 aa14.44□□□□□ -0.1
LIG1-217ENST00000599165 ZNF287Q9HBT7 754 aa14.44□□□□□ -0.1
LIG1-217ENST00000599165 SYNPO2Q9UMS6 1093 aa14.44□□□□□ -0.1
LIG1-217ENST00000599165 TSPY3P0CV98 308 aa14.43□□□□□ -0.1
LIG1-217ENST00000599165 TSPY8P0CW00 308 aa14.43□□□□□ -0.1
LIG1-217ENST00000599165 ZKSCAN1P17029 563 aaPredicted RBP14.43□□□□□ -0.1
LIG1-217ENST00000599165 ADORA2AP29274 412 aa14.43□□□□□ -0.1
LIG1-217ENST00000599165 TTC22Q5TAA0 569 aa14.43□□□□□ -0.1
LIG1-217ENST00000599165 WDR78Q5VTH9 848 aa14.43□□□□□ -0.1
LIG1-217ENST00000599165 SAMD1Q6SPF0 538 aaPredicted RBP14.43□□□□□ -0.1
LIG1-217ENST00000599165 CWC27Q6UX04 472 aaKnown RBP14.43□□□□□ -0.1
LIG1-217ENST00000599165 CCAR1Q8IX12 1150 aaKnown RBP14.43□□□□□ -0.1
LIG1-217ENST00000599165 DIS3LQ8TF46 1054 aaKnown RBP14.43□□□□□ -0.1
LIG1-217ENST00000599165 RAD21O60216 631 aa14.42□□□□□ -0.1
LIG1-217ENST00000599165 FARP2O94887 1054 aaPredicted RBP14.42□□□□□ -0.1
LIG1-217ENST00000599165 SLC3A2P08195 630 aaKnown RBP14.42□□□□□ -0.1
LIG1-217ENST00000599165 HAND2P61296 217 aa14.42□□□□□ -0.1
LIG1-217ENST00000599165 LHX8Q68G74 356 aa14.42□□□□□ -0.1
LIG1-217ENST00000599165 RIOX2Q8IUF8 465 aa14.42□□□□□ -0.1
LIG1-217ENST00000599165 TRPV1Q8NER1 839 aa14.42□□□□□ -0.1
LIG1-217ENST00000599165 SLF1Q9BQI6 1058 aa14.42□□□□□ -0.1
LIG1-217ENST00000599165 HMX1Q9NP08 348 aaPredicted RBP14.42□□□□□ -0.1
LIG1-217ENST00000599165 RIPK3Q9Y572 518 aa14.42□□□□□ -0.1
LIG1-217ENST00000599165 CYP2C19P33261 490 aa14.41□□□□□ -0.1
LIG1-217ENST00000599165 PLS1Q14651 629 aa14.41□□□□□ -0.1
LIG1-217ENST00000599165 SLFN13Q68D06 897 aa14.41□□□□□ -0.1
LIG1-217ENST00000599165 NCAPG2Q86XI2 1143 aa14.41□□□□□ -0.1
LIG1-217ENST00000599165 TRMT44Q8IYL2 757 aaKnown RBP14.41□□□□□ -0.1
LIG1-217ENST00000599165 MROH8Q9H579 483 aa14.41□□□□□ -0.1
LIG1-217ENST00000599165 OGDHLQ9ULD0 1010 aa14.41□□□□□ -0.1
LIG1-217ENST00000599165 NEDD4P46934 1319 aa14.41□□□□□ -0.1
LIG1-217ENST00000599165 MCM3APO60318 1980 aa14.4□□□□□ -0.1
LIG1-217ENST00000599165 TSPY2A6NKD2 308 aa14.4□□□□□ -0.1
LIG1-217ENST00000599165 STRNO43815 780 aa14.4□□□□□ -0.1
LIG1-217ENST00000599165 RANBP6O60518 1105 aaKnown RBP14.4□□□□□ -0.1
LIG1-217ENST00000599165 STAT3P40763 770 aa14.4□□□□□ -0.1
LIG1-217ENST00000599165 RCSD1Q6JBY9 416 aa14.4□□□□□ -0.1
LIG1-217ENST00000599165 ABRAQ8N0Z2 381 aa14.4□□□□□ -0.1
LIG1-217ENST00000599165 STAG1Q8WVM7 1258 aa14.4□□□□□ -0.1
LIG1-217ENST00000599165 GMCL1Q96IK5 515 aa14.4□□□□□ -0.1
LIG1-217ENST00000599165 IVNS1ABPQ9Y6Y0 642 aa14.4□□□□□ -0.1
LIG1-217ENST00000599165 LCTP09848 1927 aa14.4□□□□□ -0.1
LIG1-217ENST00000599165 ATP2A1O14983 1001 aa14.39□□□□□ -0.11
LIG1-217ENST00000599165 SLC25A27O95847 323 aa14.39□□□□□ -0.11
LIG1-217ENST00000599165 TFRCP02786 760 aaKnown RBP14.39□□□□□ -0.11
LIG1-217ENST00000599165 BMP3P12645 472 aa14.39□□□□□ -0.11
LIG1-217ENST00000599165 CYBAP13498 195 aa14.39□□□□□ -0.11
LIG1-217ENST00000599165 AKNAD1Q5T1N1 836 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms