RNA–Protein interactions for RNA: ENST00000597651.5

SOX2-OT-227, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 629 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-227ENST00000597651 SDSP20132 328 aa16.28■□□□□ 0.2
SOX2-OT-227ENST00000597651 CYP2C19P33261 490 aa16.28■□□□□ 0.2
SOX2-OT-227ENST00000597651 WDR78Q5VTH9 848 aa16.28■□□□□ 0.2
SOX2-OT-227ENST00000597651 GIMAP6Q6P9H5 292 aa16.28■□□□□ 0.2
SOX2-OT-227ENST00000597651 DDRGK1Q96HY6 314 aa16.28■□□□□ 0.2
SOX2-OT-227ENST00000597651 TANGO6Q9C0B7 1094 aa16.28■□□□□ 0.2
SOX2-OT-227ENST00000597651 NBPF3Q9H094 633 aa16.28■□□□□ 0.2
SOX2-OT-227ENST00000597651 SPATC1LQ9H0A9 340 aa16.28■□□□□ 0.2
SOX2-OT-227ENST00000597651 HELLSQ9NRZ9 838 aa16.28■□□□□ 0.2
SOX2-OT-227ENST00000597651 FBXO28Q9NVF7 368 aa16.28■□□□□ 0.2
SOX2-OT-227ENST00000597651 NR2E3Q9Y5X4 410 aa16.28■□□□□ 0.2
SOX2-OT-227ENST00000597651 LAMA2P24043 3122 aaKnown RBP16.27■□□□□ 0.2
SOX2-OT-227ENST00000597651 PATL2C9JE40 543 aaKnown RBP16.27■□□□□ 0.2
SOX2-OT-227ENST00000597651 SOX1O00570 391 aaPredicted RBP16.27■□□□□ 0.2
SOX2-OT-227ENST00000597651 ERCC3P19447 782 aa16.27■□□□□ 0.2
SOX2-OT-227ENST00000597651 RASA1P20936 1047 aa16.27■□□□□ 0.2
SOX2-OT-227ENST00000597651 CCNA1P78396 465 aa16.27■□□□□ 0.2
SOX2-OT-227ENST00000597651 CCAR1Q8IX12 1150 aaKnown RBP16.27■□□□□ 0.2
SOX2-OT-227ENST00000597651 TRMT44Q8IYL2 757 aaKnown RBP16.27■□□□□ 0.2
SOX2-OT-227ENST00000597651 C7orf61Q8IZ16 206 aa16.27■□□□□ 0.2
SOX2-OT-227ENST00000597651 CCDC17Q96LX7 622 aa16.27■□□□□ 0.2
SOX2-OT-227ENST00000597651 C11orf49Q9H6J7 331 aa16.27■□□□□ 0.2
SOX2-OT-227ENST00000597651 ARPP21Q9UBL0 812 aaPredicted RBP16.27■□□□□ 0.2
SOX2-OT-227ENST00000597651 ADAMTS5Q9UNA0 930 aa16.27■□□□□ 0.2
SOX2-OT-227ENST00000597651 ZNFX1Q9P2E3 1918 aaKnown RBP16.27■□□□□ 0.19
SOX2-OT-227ENST00000597651 COL6A3P12111 3177 aa16.26■□□□□ 0.19
SOX2-OT-227ENST00000597651 APPP05067 770 aa16.26■□□□□ 0.19
SOX2-OT-227ENST00000597651 ADORA2AP29274 412 aa16.26■□□□□ 0.19
SOX2-OT-227ENST00000597651 TMEM132BQ14DG7 1078 aa16.26■□□□□ 0.19
SOX2-OT-227ENST00000597651 MCMDC2Q4G0Z9 681 aa16.26■□□□□ 0.19
SOX2-OT-227ENST00000597651 SBK1Q52WX2 424 aa16.26■□□□□ 0.19
SOX2-OT-227ENST00000597651 ZNF589Q86UQ0 364 aaPredicted RBP16.26■□□□□ 0.19
SOX2-OT-227ENST00000597651 IFNL3Q8IZI9 196 aa16.26■□□□□ 0.19
SOX2-OT-227ENST00000597651 STK11IPQ8N1F8 1099 aa16.26■□□□□ 0.19
SOX2-OT-227ENST00000597651 GDF15Q99988 308 aa16.26■□□□□ 0.19
SOX2-OT-227ENST00000597651 HOXC10Q9NYD6 342 aa16.26■□□□□ 0.19
SOX2-OT-227ENST00000597651 ZMYND8Q9ULU4 1186 aaPredicted RBP16.26■□□□□ 0.19
SOX2-OT-227ENST00000597651 ROBO3Q96MS0 1386 aa16.26■□□□□ 0.19
SOX2-OT-227ENST00000597651 FLOT1O75955 427 aa16.25■□□□□ 0.19
SOX2-OT-227ENST00000597651 CYBAP13498 195 aa16.25■□□□□ 0.19
SOX2-OT-227ENST00000597651 SYN1P17600 705 aa16.25■□□□□ 0.19
SOX2-OT-227ENST00000597651 TDO2P48775 406 aa16.25■□□□□ 0.19
SOX2-OT-227ENST00000597651 LRRC26Q2I0M4 334 aa16.25■□□□□ 0.19
SOX2-OT-227ENST00000597651 VPS53Q5VIR6 699 aa16.25■□□□□ 0.19
SOX2-OT-227ENST00000597651 AMOTL1Q8IY63 956 aa16.25■□□□□ 0.19
SOX2-OT-227ENST00000597651 SHCBP1Q8NEM2 672 aa16.25■□□□□ 0.19
SOX2-OT-227ENST00000597651 REPS2Q8NFH8 660 aa16.25■□□□□ 0.19
SOX2-OT-227ENST00000597651 LPAR1Q92633 364 aa16.25■□□□□ 0.19
SOX2-OT-227ENST00000597651 ARHGEF10LQ9HCE6 1279 aa16.25■□□□□ 0.19
SOX2-OT-227ENST00000597651 IGKV6D-41A0A0C4DH26 115 aa16.24■□□□□ 0.19
SOX2-OT-227ENST00000597651 WDR46O15213 610 aaKnown RBP16.24■□□□□ 0.19
SOX2-OT-227ENST00000597651 NUP88Q99567 741 aaPredicted RBP16.24■□□□□ 0.19
SOX2-OT-227ENST00000597651 KANSL2Q9H9L4 492 aa16.24■□□□□ 0.19
SOX2-OT-227ENST00000597651 CCDC171Q6TFL3 1326 aa16.23■□□□□ 0.19
SOX2-OT-227ENST00000597651 MINDY4BA8MYZ0 360 aa16.23■□□□□ 0.19
SOX2-OT-227ENST00000597651 PRAMEF19Q5SWL8 479 aa16.23■□□□□ 0.19
SOX2-OT-227ENST00000597651 FAM83BQ5T0W9 1011 aa16.23■□□□□ 0.19
SOX2-OT-227ENST00000597651 ERICH6BQ5W0A0 696 aa16.23■□□□□ 0.19
SOX2-OT-227ENST00000597651 CWC27Q6UX04 472 aaKnown RBP16.23■□□□□ 0.19
SOX2-OT-227ENST00000597651 LRCH3Q96II8 777 aa16.23■□□□□ 0.19
SOX2-OT-227ENST00000597651 NACAP1Q9BZK3 213 aa16.23■□□□□ 0.19
SOX2-OT-227ENST00000597651 NAPBQ9H115 298 aa16.23■□□□□ 0.19
SOX2-OT-227ENST00000597651 CWC22Q9HCG8 908 aaKnown RBP16.23■□□□□ 0.19
SOX2-OT-227ENST00000597651 DIAPH3Q9NSV4 1193 aa16.23■□□□□ 0.19
SOX2-OT-227ENST00000597651 DDX20Q9UHI6 824 aaKnown RBP16.23■□□□□ 0.19
SOX2-OT-227ENST00000597651 ZNF214Q9UL59 606 aaPredicted RBP16.23■□□□□ 0.19
SOX2-OT-227ENST00000597651 TACC3Q9Y6A5 838 aa16.23■□□□□ 0.19
SOX2-OT-227ENST00000597651 IVNS1ABPQ9Y6Y0 642 aa16.23■□□□□ 0.19
SOX2-OT-227ENST00000597651 MYH4Q9Y623 1939 aa16.22■□□□□ 0.19
SOX2-OT-227ENST00000597651 HIP1O00291 1037 aa16.22■□□□□ 0.19
SOX2-OT-227ENST00000597651 ATP2B2Q01814 1243 aa16.22■□□□□ 0.19
SOX2-OT-227ENST00000597651 MFSD14CQ5VZR4 134 aa16.22■□□□□ 0.19
SOX2-OT-227ENST00000597651 ANO1Q5XXA6 986 aa16.22■□□□□ 0.19
SOX2-OT-227ENST00000597651 OLFML2BQ68BL8 750 aa16.22■□□□□ 0.19
SOX2-OT-227ENST00000597651 SAMD1Q6SPF0 538 aaPredicted RBP16.22■□□□□ 0.19
SOX2-OT-227ENST00000597651 MB21D1Q8N884 522 aa16.22■□□□□ 0.19
SOX2-OT-227ENST00000597651 IL25Q9H293 177 aa16.22■□□□□ 0.19
SOX2-OT-227ENST00000597651 SMCHD1A6NHR9 2005 aa16.21■□□□□ 0.19
SOX2-OT-227ENST00000597651 PLXNA1Q9UIW2 1896 aa16.21■□□□□ 0.19
SOX2-OT-227ENST00000597651 VWA5AO00534 786 aa16.21■□□□□ 0.19
SOX2-OT-227ENST00000597651 STRNO43815 780 aa16.21■□□□□ 0.19
SOX2-OT-227ENST00000597651 PRDM1O75626 825 aa16.21■□□□□ 0.19
SOX2-OT-227ENST00000597651 HSPD1P10809 573 aaKnown RBP16.21■□□□□ 0.19
SOX2-OT-227ENST00000597651 PLS1Q14651 629 aa16.21■□□□□ 0.19
SOX2-OT-227ENST00000597651 NCAPG2Q86XI2 1143 aa16.21■□□□□ 0.19
SOX2-OT-227ENST00000597651 PPP4R2Q9NY27 417 aa16.21■□□□□ 0.19
SOX2-OT-227ENST00000597651 PPP1R9AQ9ULJ8 1098 aa16.21■□□□□ 0.19
SOX2-OT-227ENST00000597651 PGK2P07205 417 aa16.2■□□□□ 0.18
SOX2-OT-227ENST00000597651 BMP8BP34820 402 aa16.2■□□□□ 0.18
SOX2-OT-227ENST00000597651 MAGEA10P43363 369 aaPredicted RBP16.2■□□□□ 0.18
SOX2-OT-227ENST00000597651 PPARAQ07869 468 aa16.2■□□□□ 0.18
SOX2-OT-227ENST00000597651 ALX1Q15699 326 aa16.2■□□□□ 0.18
SOX2-OT-227ENST00000597651 DPP9Q86TI2 863 aa16.2■□□□□ 0.18
SOX2-OT-227ENST00000597651 RIOX2Q8IUF8 465 aa16.2■□□□□ 0.18
SOX2-OT-227ENST00000597651 MAML3Q96JK9 1138 aa16.2■□□□□ 0.18
SOX2-OT-227ENST00000597651 MROH8Q9H579 483 aa16.2■□□□□ 0.18
SOX2-OT-227ENST00000597651 SH2D4AQ9H788 454 aa16.2■□□□□ 0.18
SOX2-OT-227ENST00000597651 NYAP2Q9P242 653 aa16.2■□□□□ 0.18
SOX2-OT-227ENST00000597651 A0A1W2PPC1 479 aa16.19■□□□□ 0.18
SOX2-OT-227ENST00000597651 F5H6K3 240 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms