RNA–Protein interactions for RNA: ENST00000596172.1

ZNF558-204, Transcript of zinc finger protein 558, humanhuman

TSL 4

Gene ZNF558, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-204ENST00000596172 LAMA4Q16363 1823 aa21.5■■□□□ 1.03
ZNF558-204ENST00000596172 B4E1Z4 1266 aa21.5■■□□□ 1.03
ZNF558-204ENST00000596172 TNPO2O14787 897 aaKnown RBP21.5■■□□□ 1.03
ZNF558-204ENST00000596172 MAPK4P31152 587 aa21.5■■□□□ 1.03
ZNF558-204ENST00000596172 TRDNQ13061 729 aa21.5■■□□□ 1.03
ZNF558-204ENST00000596172 COA7Q96BR5 231 aa21.5■■□□□ 1.03
ZNF558-204ENST00000596172 TMEM47Q9BQJ4 181 aa21.5■■□□□ 1.03
ZNF558-204ENST00000596172 PAGR1Q9BTK6 254 aa21.5■■□□□ 1.03
ZNF558-204ENST00000596172 ANO2Q9NQ90 1003 aa21.5■■□□□ 1.03
ZNF558-204ENST00000596172 BTBD7Q9P203 1132 aa21.5■■□□□ 1.03
ZNF558-204ENST00000596172 PEX10O60683 326 aa21.49■■□□□ 1.03
ZNF558-204ENST00000596172 BMP3P12645 472 aa21.49■■□□□ 1.03
ZNF558-204ENST00000596172 NECTIN1Q15223 517 aa21.49■■□□□ 1.03
ZNF558-204ENST00000596172 PRPF38AQ8NAV1 312 aaKnown RBP21.49■■□□□ 1.03
ZNF558-204ENST00000596172 ATG4CQ96DT6 458 aa21.49■■□□□ 1.03
ZNF558-204ENST00000596172 NUP88Q99567 741 aaPredicted RBP21.49■■□□□ 1.03
ZNF558-204ENST00000596172 FBXO28Q9NVF7 368 aa21.49■■□□□ 1.03
ZNF558-204ENST00000596172 FEM1BQ9UK73 627 aa21.49■■□□□ 1.03
ZNF558-204ENST00000596172 E7EWF7 191 aa21.48■■□□□ 1.03
ZNF558-204ENST00000596172 PLA2G6O60733 806 aa21.48■■□□□ 1.03
ZNF558-204ENST00000596172 SLC1A4P43007 532 aa21.48■■□□□ 1.03
ZNF558-204ENST00000596172 ZSCAN10Q96SZ4 725 aaPredicted RBP21.48■■□□□ 1.03
ZNF558-204ENST00000596172 SLF1Q9BQI6 1058 aa21.48■■□□□ 1.03
ZNF558-204ENST00000596172 PTCH2Q9Y6C5 1203 aa21.48■■□□□ 1.03
ZNF558-204ENST00000596172 HTTP42858 3142 aa21.48■■□□□ 1.03
ZNF558-204ENST00000596172 VWA5AO00534 786 aa21.47■■□□□ 1.03
ZNF558-204ENST00000596172 MCCP23508 829 aa21.47■■□□□ 1.03
ZNF558-204ENST00000596172 PRKCZQ05513 592 aa21.47■■□□□ 1.03
ZNF558-204ENST00000596172 IRF5Q13568 498 aa21.47■■□□□ 1.03
ZNF558-204ENST00000596172 DCAF4Q8WV16 495 aa21.47■■□□□ 1.03
ZNF558-204ENST00000596172 PORCNQ9H237 461 aa21.47■■□□□ 1.03
ZNF558-204ENST00000596172 GJD2Q9UKL4 321 aa21.47■■□□□ 1.03
ZNF558-204ENST00000596172 ECM2O94769 699 aaPredicted RBP21.46■■□□□ 1.03
ZNF558-204ENST00000596172 CCAR1Q8IX12 1150 aaKnown RBP21.46■■□□□ 1.03
ZNF558-204ENST00000596172 SHCBP1Q8NEM2 672 aa21.46■■□□□ 1.03
ZNF558-204ENST00000596172 NCOA7Q8NI08 942 aa21.46■■□□□ 1.03
ZNF558-204ENST00000596172 CHURC1Q8WUH1 139 aa21.46■■□□□ 1.03
ZNF558-204ENST00000596172 ZKSCAN3Q9BRR0 538 aa21.46■■□□□ 1.03
ZNF558-204ENST00000596172 SPATC1LQ9H0A9 340 aa21.46■■□□□ 1.03
ZNF558-204ENST00000596172 GABRQQ9UN88 632 aa21.46■■□□□ 1.03
ZNF558-204ENST00000596172 TAF6LQ9Y6J9 622 aa21.46■■□□□ 1.03
ZNF558-204ENST00000596172 RLFQ13129 1914 aa21.46■■□□□ 1.03
ZNF558-204ENST00000596172 SLC27A2O14975 620 aa21.45■■□□□ 1.02
ZNF558-204ENST00000596172 FDX1P10109 184 aa21.45■■□□□ 1.02
ZNF558-204ENST00000596172 FLT3LGP49771 235 aa21.45■■□□□ 1.02
ZNF558-204ENST00000596172 TMEM132BQ14DG7 1078 aa21.45■■□□□ 1.02
ZNF558-204ENST00000596172 CREB3L3Q68CJ9 461 aa21.45■■□□□ 1.02
ZNF558-204ENST00000596172 STOX1Q6ZVD7 989 aa21.45■■□□□ 1.02
ZNF558-204ENST00000596172 PLEKHH3Q7Z736 793 aa21.45■■□□□ 1.02
ZNF558-204ENST00000596172 FAM160B2Q86V87 743 aa21.45■■□□□ 1.02
ZNF558-204ENST00000596172 ENAHQ8N8S7 591 aaPredicted RBP21.45■■□□□ 1.02
ZNF558-204ENST00000596172 REPS2Q8NFH8 660 aa21.45■■□□□ 1.02
ZNF558-204ENST00000596172 RAET1EQ8TD07 263 aa21.45■■□□□ 1.02
ZNF558-204ENST00000596172 ARMC5Q96C12 935 aa21.45■■□□□ 1.02
ZNF558-204ENST00000596172 UBAC1Q9BSL1 405 aa21.45■■□□□ 1.02
ZNF558-204ENST00000596172 MOV10L1Q9BXT6 1211 aaKnown RBP21.45■■□□□ 1.02
ZNF558-204ENST00000596172 MYH4Q9Y623 1939 aa21.45■■□□□ 1.02
ZNF558-204ENST00000596172 TMEM232C9JQI7 657 aa21.44■■□□□ 1.02
ZNF558-204ENST00000596172 SNHG28P0DPA3 235 aa21.44■■□□□ 1.02
ZNF558-204ENST00000596172 STAT2P52630 851 aa21.44■■□□□ 1.02
ZNF558-204ENST00000596172 IFFO2Q5TF58 517 aa21.44■■□□□ 1.02
ZNF558-204ENST00000596172 RNF20Q5VTR2 975 aa21.44■■□□□ 1.02
ZNF558-204ENST00000596172 CYB5R4Q7L1T6 521 aa21.44■■□□□ 1.02
ZNF558-204ENST00000596172 GPR142Q7Z601 462 aa21.44■■□□□ 1.02
ZNF558-204ENST00000596172 RALYLQ86SE5 291 aaKnown RBP21.44■■□□□ 1.02
ZNF558-204ENST00000596172 NBPF11Q86T75 865 aa21.44■■□□□ 1.02
ZNF558-204ENST00000596172 PXYLP1Q8TE99 480 aa21.44■■□□□ 1.02
ZNF558-204ENST00000596172 TNKSO95271 1327 aa21.44■■□□□ 1.02
ZNF558-204ENST00000596172 ATP2A1O14983 1001 aa21.43■■□□□ 1.02
ZNF558-204ENST00000596172 SLC25A27O95847 323 aa21.43■■□□□ 1.02
ZNF558-204ENST00000596172 SEC23AQ15436 765 aa21.43■■□□□ 1.02
ZNF558-204ENST00000596172 TSGA10IPQ3SY00 556 aa21.43■■□□□ 1.02
ZNF558-204ENST00000596172 SLC9C1Q4G0N8 1177 aa21.43■■□□□ 1.02
ZNF558-204ENST00000596172 SOCS4Q8WXH5 440 aa21.43■■□□□ 1.02
ZNF558-204ENST00000596172 USP6NLQ92738 828 aa21.43■■□□□ 1.02
ZNF558-204ENST00000596172 MTA3Q9BTC8 594 aa21.43■■□□□ 1.02
ZNF558-204ENST00000596172 MROH8Q9H579 483 aa21.43■■□□□ 1.02
ZNF558-204ENST00000596172 SLC38A10Q9HBR0 1119 aa21.43■■□□□ 1.02
ZNF558-204ENST00000596172 ZNF214Q9UL59 606 aaPredicted RBP21.43■■□□□ 1.02
ZNF558-204ENST00000596172 ZSWIM8A7E2V4 1837 aa21.43■■□□□ 1.02
ZNF558-204ENST00000596172 EPB41L2O43491 1005 aaKnown RBP21.42■■□□□ 1.02
ZNF558-204ENST00000596172 STRNO43815 780 aa21.42■■□□□ 1.02
ZNF558-204ENST00000596172 ZBED4O75132 1171 aa21.42■■□□□ 1.02
ZNF558-204ENST00000596172 PDHBP11177 359 aa21.42■■□□□ 1.02
ZNF558-204ENST00000596172 COPB2P35606 906 aa21.42■■□□□ 1.02
ZNF558-204ENST00000596172 STAT3P40763 770 aa21.42■■□□□ 1.02
ZNF558-204ENST00000596172 MORN1Q5T089 497 aa21.42■■□□□ 1.02
ZNF558-204ENST00000596172 SAMD1Q6SPF0 538 aaPredicted RBP21.42■■□□□ 1.02
ZNF558-204ENST00000596172 BTNL9Q6UXG8 535 aa21.42■■□□□ 1.02
ZNF558-204ENST00000596172 KCTD1Q719H9 257 aa21.42■■□□□ 1.02
ZNF558-204ENST00000596172 RIOX2Q8IUF8 465 aa21.42■■□□□ 1.02
ZNF558-204ENST00000596172 MB21D2Q8IYB1 491 aaPredicted RBP21.42■■□□□ 1.02
ZNF558-204ENST00000596172 SLAIN1Q8ND83 568 aa21.42■■□□□ 1.02
ZNF558-204ENST00000596172 KIFC2Q96AC6 838 aa21.42■■□□□ 1.02
ZNF558-204ENST00000596172 NUDT12Q9BQG2 462 aa21.42■■□□□ 1.02
ZNF558-204ENST00000596172 KAT14Q9H8E8 782 aa21.42■■□□□ 1.02
ZNF558-204ENST00000596172 A0A0G2JMZ2 1700 aa21.41■■□□□ 1.02
ZNF558-204ENST00000596172 SLC15A5A6NIM6 579 aa21.41■■□□□ 1.02
ZNF558-204ENST00000596172 REC8O95072 547 aa21.41■■□□□ 1.02
ZNF558-204ENST00000596172 XRCC5P13010 732 aaKnown RBP21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms