RNA–Protein interactions for RNA: ENST00000595858.5

DDX49-204, Transcript of DEAD-box helicase 49, humanhuman

TSL 1 (best)

Gene DDX49, Length 1,882 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-204ENST00000595858 PCNTO95613 3336 aa17.51■□□□□ 0.39
DDX49-204ENST00000595858 PDHBP11177 359 aa17.51■□□□□ 0.39
DDX49-204ENST00000595858 OSBPP22059 807 aa17.51■□□□□ 0.39
DDX49-204ENST00000595858 Q6ZUG5 572 aa17.51■□□□□ 0.39
DDX49-204ENST00000595858 RASGRP2Q7LDG7 609 aa17.51■□□□□ 0.39
DDX49-204ENST00000595858 FBXL16Q8N461 479 aa17.51■□□□□ 0.39
DDX49-204ENST00000595858 KIF2CQ99661 725 aa17.51■□□□□ 0.39
DDX49-204ENST00000595858 ASCC2Q9H1I8 757 aaPredicted RBP17.51■□□□□ 0.39
DDX49-204ENST00000595858 WBP1LQ9NX94 342 aa17.51■□□□□ 0.39
DDX49-204ENST00000595858 TRPA1O75762 1119 aa17.5■□□□□ 0.39
DDX49-204ENST00000595858 SNHG28P0DPA3 235 aa17.5■□□□□ 0.39
DDX49-204ENST00000595858 BMP3P12645 472 aa17.5■□□□□ 0.39
DDX49-204ENST00000595858 IRX3P78415 501 aaPredicted RBP17.5■□□□□ 0.39
DDX49-204ENST00000595858 FGD1P98174 961 aa17.5■□□□□ 0.39
DDX49-204ENST00000595858 TAF1CQ15572 869 aaPredicted RBP17.5■□□□□ 0.39
DDX49-204ENST00000595858 NFXL1Q6ZNB6 911 aa17.5■□□□□ 0.39
DDX49-204ENST00000595858 SGMS1Q86VZ5 419 aa17.5■□□□□ 0.39
DDX49-204ENST00000595858 DCAF4Q8WV16 495 aa17.5■□□□□ 0.39
DDX49-204ENST00000595858 AGXT2Q9BYV1 514 aa17.5■□□□□ 0.39
DDX49-204ENST00000595858 TANGO6Q9C0B7 1094 aa17.5■□□□□ 0.39
DDX49-204ENST00000595858 PNMA3Q9UL41 463 aa17.5■□□□□ 0.39
DDX49-204ENST00000595858 CCDC69A6NI79 296 aa17.5■□□□□ 0.39
DDX49-204ENST00000595858 CA12O43570 354 aa17.5■□□□□ 0.39
DDX49-204ENST00000595858 CYP2C8P10632 490 aa17.5■□□□□ 0.39
DDX49-204ENST00000595858 CATIPQ7Z7H3 387 aa17.5■□□□□ 0.39
DDX49-204ENST00000595858 IPO9Q96P70 1041 aaKnown RBP17.5■□□□□ 0.39
DDX49-204ENST00000595858 PDRG1Q9NUG6 133 aa17.5■□□□□ 0.39
DDX49-204ENST00000595858 TROAPQ12815 778 aa17.49■□□□□ 0.39
DDX49-204ENST00000595858 COG2Q14746 738 aa17.49■□□□□ 0.39
DDX49-204ENST00000595858 KCTD1Q719H9 257 aa17.49■□□□□ 0.39
DDX49-204ENST00000595858 ZNF654Q8IZM8 581 aa17.49■□□□□ 0.39
DDX49-204ENST00000595858 PARK7Q99497 189 aaKnown RBP17.49■□□□□ 0.39
DDX49-204ENST00000595858 P2RX7Q99572 595 aaKnown RBP17.49■□□□□ 0.39
DDX49-204ENST00000595858 BEGAINQ9BUH8 593 aa17.49■□□□□ 0.39
DDX49-204ENST00000595858 FLOT1O75955 427 aa17.48■□□□□ 0.39
DDX49-204ENST00000595858 ZNF543Q08ER8 600 aa17.48■□□□□ 0.39
DDX49-204ENST00000595858 CRHR2Q13324 411 aa17.48■□□□□ 0.39
DDX49-204ENST00000595858 CCDC96Q2M329 555 aa17.48■□□□□ 0.39
DDX49-204ENST00000595858 BRF1Q92994 677 aa17.48■□□□□ 0.39
DDX49-204ENST00000595858 ZFYVE28Q9HCC9 887 aa17.48■□□□□ 0.39
DDX49-204ENST00000595858 FBXO28Q9NVF7 368 aa17.48■□□□□ 0.39
DDX49-204ENST00000595858 HOXC10Q9NYD6 342 aa17.48■□□□□ 0.39
DDX49-204ENST00000595858 ISY1Q9ULR0 285 aaKnown RBP17.48■□□□□ 0.39
DDX49-204ENST00000595858 SLC12A7Q9Y666 1083 aa17.48■□□□□ 0.39
DDX49-204ENST00000595858 TMEM232C9JQI7 657 aa17.48■□□□□ 0.39
DDX49-204ENST00000595858 NEK4P51957 841 aa17.48■□□□□ 0.39
DDX49-204ENST00000595858 TOB2Q14106 344 aaPredicted RBP17.48■□□□□ 0.39
DDX49-204ENST00000595858 MYL10Q9BUA6 226 aa17.48■□□□□ 0.39
DDX49-204ENST00000595858 CFHR5Q9BXR6 569 aa17.48■□□□□ 0.39
DDX49-204ENST00000595858 SAGE1Q9NXZ1 904 aa17.48■□□□□ 0.39
DDX49-204ENST00000595858 FEM1BQ9UK73 627 aa17.48■□□□□ 0.39
DDX49-204ENST00000595858 BRPF3Q9ULD4 1205 aa17.48■□□□□ 0.39
DDX49-204ENST00000595858 FRMPD2Q68DX3 1309 aaPredicted RBP17.47■□□□□ 0.39
DDX49-204ENST00000595858 DDAH1O94760 285 aa17.47■□□□□ 0.39
DDX49-204ENST00000595858 TBC1D8O95759 1140 aa17.47■□□□□ 0.39
DDX49-204ENST00000595858 HERVK_113P62684 666 aa17.47■□□□□ 0.39
DDX49-204ENST00000595858 APOBRQ0VD83 1088 aa17.47■□□□□ 0.39
DDX49-204ENST00000595858 GPATCH4Q5T3I0 446 aaKnown RBP17.47■□□□□ 0.39
DDX49-204ENST00000595858 APOA5Q6Q788 366 aa17.47■□□□□ 0.39
DDX49-204ENST00000595858 SMCR8Q8TEV9 937 aaPredicted RBP17.47■□□□□ 0.39
DDX49-204ENST00000595858 NUP133Q8WUM0 1156 aa17.47■□□□□ 0.39
DDX49-204ENST00000595858 ALDH8A1Q9H2A2 487 aaPredicted RBP17.47■□□□□ 0.39
DDX49-204ENST00000595858 R3HDMLQ9H3Y0 253 aa17.47■□□□□ 0.39
DDX49-204ENST00000595858 GPCPD1Q9NPB8 672 aa17.47■□□□□ 0.39
DDX49-204ENST00000595858 TLR2O60603 784 aa17.46■□□□□ 0.39
DDX49-204ENST00000595858 PLA2G6O60733 806 aa17.46■□□□□ 0.39
DDX49-204ENST00000595858 PARP1P09874 1014 aaKnown RBP17.46■□□□□ 0.39
DDX49-204ENST00000595858 GOLGA8HP0CJ92 632 aa17.46■□□□□ 0.39
DDX49-204ENST00000595858 DSG3P32926 999 aa17.46■□□□□ 0.39
DDX49-204ENST00000595858 STAT2P52630 851 aa17.46■□□□□ 0.39
DDX49-204ENST00000595858 TTBK2Q6IQ55 1244 aa17.46■□□□□ 0.39
DDX49-204ENST00000595858 SAMD1Q6SPF0 538 aaPredicted RBP17.46■□□□□ 0.39
DDX49-204ENST00000595858 SYNE3Q6ZMZ3 975 aa17.46■□□□□ 0.39
DDX49-204ENST00000595858 CHURC1Q8WUH1 139 aa17.46■□□□□ 0.39
DDX49-204ENST00000595858 PPP1R9AQ9ULJ8 1098 aa17.46■□□□□ 0.39
DDX49-204ENST00000595858 MYPNQ86TC9 1320 aa17.46■□□□□ 0.39
DDX49-204ENST00000595858 KLF18A0A0U1RQI7 1052 aa17.46■□□□□ 0.38
DDX49-204ENST00000595858 SPDYE16A6NNV3 312 aaPredicted RBP17.46■□□□□ 0.38
DDX49-204ENST00000595858 ASPRV1Q53RT3 343 aa17.46■□□□□ 0.38
DDX49-204ENST00000595858 POTEEQ6S8J3 1075 aa17.46■□□□□ 0.38
DDX49-204ENST00000595858 FAM160B2Q86V87 743 aa17.46■□□□□ 0.38
DDX49-204ENST00000595858 PRPF38AQ8NAV1 312 aaKnown RBP17.46■□□□□ 0.38
DDX49-204ENST00000595858 MAP3K14Q99558 947 aa17.46■□□□□ 0.38
DDX49-204ENST00000595858 SLF1Q9BQI6 1058 aa17.46■□□□□ 0.38
DDX49-204ENST00000595858 PALM3A6NDB9 673 aaPredicted RBP17.45■□□□□ 0.38
DDX49-204ENST00000595858 CALM1P0DP23 149 aa17.45■□□□□ 0.38
DDX49-204ENST00000595858 CALM2P0DP24 149 aa17.45■□□□□ 0.38
DDX49-204ENST00000595858 CALM3P0DP25 149 aa17.45■□□□□ 0.38
DDX49-204ENST00000595858 EVCP57679 992 aa17.45■□□□□ 0.38
DDX49-204ENST00000595858 IKQ13123 557 aaPredicted RBP17.45■□□□□ 0.38
DDX49-204ENST00000595858 GRM4Q14833 912 aa17.45■□□□□ 0.38
DDX49-204ENST00000595858 BTNL9Q6UXG8 535 aa17.45■□□□□ 0.38
DDX49-204ENST00000595858 LBX2Q6XYB7 198 aa17.45■□□□□ 0.38
DDX49-204ENST00000595858 STAG2Q8N3U4 1231 aa17.45■□□□□ 0.38
DDX49-204ENST00000595858 ATG4CQ96DT6 458 aa17.45■□□□□ 0.38
DDX49-204ENST00000595858 MAD2L2Q9UI95 211 aa17.45■□□□□ 0.38
DDX49-204ENST00000595858 ADAMTS5Q9UNA0 930 aa17.45■□□□□ 0.38
DDX49-204ENST00000595858 ADGRA2Q96PE1 1338 aa17.44■□□□□ 0.38
DDX49-204ENST00000595858 ZBTB43O43298 467 aa17.44■□□□□ 0.38
DDX49-204ENST00000595858 RXRAP19793 462 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms