RNA–Protein interactions for RNA: ENST00000595343.5

PDE4C-208, Transcript of phosphodiesterase 4C, humanhuman

TSL 1 (best)

Gene PDE4C, Length 420 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-208ENST00000595343 BOLA2Q9H3K6 86 aa22.45■■□□□ 1.18
PDE4C-208ENST00000595343 ADAMTS5Q9UNA0 930 aa22.45■■□□□ 1.18
PDE4C-208ENST00000595343 USP17L12C9JPN9 530 aa22.44■■□□□ 1.18
PDE4C-208ENST00000595343 USP17L21D6R901 530 aa22.44■■□□□ 1.18
PDE4C-208ENST00000595343 PARP14Q460N5 1801 aa22.44■■□□□ 1.18
PDE4C-208ENST00000595343 C9orf50Q5SZB4 431 aa22.44■■□□□ 1.18
PDE4C-208ENST00000595343 ZNF697Q5TEC3 545 aa22.44■■□□□ 1.18
PDE4C-208ENST00000595343 C1orf53Q5VUE5 145 aa22.44■■□□□ 1.18
PDE4C-208ENST00000595343 BADQ92934 168 aa22.44■■□□□ 1.18
PDE4C-208ENST00000595343 PDLIM7Q9NR12 457 aa22.44■■□□□ 1.18
PDE4C-208ENST00000595343 BAZ2AQ9UIF9 1905 aaKnown RBP22.44■■□□□ 1.18
PDE4C-208ENST00000595343 RAB11FIP3O75154 756 aa22.43■■□□□ 1.18
PDE4C-208ENST00000595343 MS4A1P11836 297 aa22.43■■□□□ 1.18
PDE4C-208ENST00000595343 EEF2P13639 858 aaKnown RBP22.43■■□□□ 1.18
PDE4C-208ENST00000595343 ATP5JP18859 108 aa22.43■■□□□ 1.18
PDE4C-208ENST00000595343 C16orf86Q6ZW13 317 aa22.43■■□□□ 1.18
PDE4C-208ENST00000595343 PHF6Q8IWS0 365 aaKnown RBP eCLIP22.43■■□□□ 1.18
PDE4C-208ENST00000595343 AMOTL1Q8IY63 956 aa22.43■■□□□ 1.18
PDE4C-208ENST00000595343 MMP19Q99542 508 aa22.43■■□□□ 1.18
PDE4C-208ENST00000595343 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.43■■□□□ 1.18
PDE4C-208ENST00000595343 NRBP1Q9UHY1 535 aa22.43■■□□□ 1.18
PDE4C-208ENST00000595343 ZNFX1Q9P2E3 1918 aaKnown RBP22.43■■□□□ 1.18
PDE4C-208ENST00000595343 CHGBP05060 677 aa22.42■■□□□ 1.18
PDE4C-208ENST00000595343 PGK2P07205 417 aa22.42■■□□□ 1.18
PDE4C-208ENST00000595343 DIEXFQ68CQ4 756 aaKnown RBP22.42■■□□□ 1.18
PDE4C-208ENST00000595343 SH3RF1Q7Z6J0 888 aa22.42■■□□□ 1.18
PDE4C-208ENST00000595343 RIOX2Q8IUF8 465 aa22.42■■□□□ 1.18
PDE4C-208ENST00000595343 HAUS7Q99871 368 aa22.42■■□□□ 1.18
PDE4C-208ENST00000595343 KANSL2Q9H9L4 492 aa22.42■■□□□ 1.18
PDE4C-208ENST00000595343 ZBTB40Q9NUA8 1239 aa22.42■■□□□ 1.18
PDE4C-208ENST00000595343 FBXO28Q9NVF7 368 aa22.42■■□□□ 1.18
PDE4C-208ENST00000595343 SMCHD1A6NHR9 2005 aa22.41■■□□□ 1.18
PDE4C-208ENST00000595343 TRIM43BA6NCK2 446 aa22.41■■□□□ 1.18
PDE4C-208ENST00000595343 TRIM43Q96BQ3 446 aaPredicted RBP22.41■■□□□ 1.18
PDE4C-208ENST00000595343 DDRGK1Q96HY6 314 aa22.41■■□□□ 1.18
PDE4C-208ENST00000595343 COL25A1Q9BXS0 654 aaPredicted RBP22.41■■□□□ 1.18
PDE4C-208ENST00000595343 XPNPEP3Q9NQH7 507 aa22.41■■□□□ 1.18
PDE4C-208ENST00000595343 PHF24Q9UPV7 400 aa22.41■■□□□ 1.18
PDE4C-208ENST00000595343 COL11A1P12107 1806 aaPredicted RBP22.41■■□□□ 1.18
PDE4C-208ENST00000595343 VWA5AO00534 786 aa22.4■■□□□ 1.18
PDE4C-208ENST00000595343 RARBP10826 455 aa22.4■■□□□ 1.18
PDE4C-208ENST00000595343 STAT3P40763 770 aa22.4■■□□□ 1.18
PDE4C-208ENST00000595343 TLE2Q04725 743 aa22.4■■□□□ 1.18
PDE4C-208ENST00000595343 KCTD2Q14681 263 aa22.4■■□□□ 1.18
PDE4C-208ENST00000595343 UBE3CQ15386 1083 aa22.4■■□□□ 1.18
PDE4C-208ENST00000595343 TINF2Q9BSI4 451 aa22.4■■□□□ 1.18
PDE4C-208ENST00000595343 GOPCQ9HD26 462 aa22.4■■□□□ 1.18
PDE4C-208ENST00000595343 PPP1R9AQ9ULJ8 1098 aa22.4■■□□□ 1.18
PDE4C-208ENST00000595343 DDX19BQ9UMR2 479 aa22.4■■□□□ 1.18
PDE4C-208ENST00000595343 DIS3Q9Y2L1 958 aaKnown RBP22.4■■□□□ 1.18
PDE4C-208ENST00000595343 COG6Q9Y2V7 657 aa22.4■■□□□ 1.18
PDE4C-208ENST00000595343 SLC4A4Q9Y6R1 1079 aa22.4■■□□□ 1.18
PDE4C-208ENST00000595343 ZBED9Q6R2W3 1325 aa22.39■■□□□ 1.18
PDE4C-208ENST00000595343 TAL1P17542 331 aaPredicted RBP22.39■■□□□ 1.17
PDE4C-208ENST00000595343 ZNF792Q3KQV3 632 aa22.39■■□□□ 1.17
PDE4C-208ENST00000595343 CTR9Q6PD62 1173 aa22.39■■□□□ 1.17
PDE4C-208ENST00000595343 CDX2Q99626 313 aaPredicted RBP22.39■■□□□ 1.17
PDE4C-208ENST00000595343 RAD21O60216 631 aa22.38■■□□□ 1.17
PDE4C-208ENST00000595343 PGK1P00558 417 aa22.38■■□□□ 1.17
PDE4C-208ENST00000595343 FAM83BQ5T0W9 1011 aa22.38■■□□□ 1.17
PDE4C-208ENST00000595343 RNF180Q86T96 592 aa22.38■■□□□ 1.17
PDE4C-208ENST00000595343 REPS2Q8NFH8 660 aa22.38■■□□□ 1.17
PDE4C-208ENST00000595343 SEMA6BQ9H3T3 888 aa22.38■■□□□ 1.17
PDE4C-208ENST00000595343 ZNF214Q9UL59 606 aaPredicted RBP22.38■■□□□ 1.17
PDE4C-208ENST00000595343 TACC3Q9Y6A5 838 aa22.38■■□□□ 1.17
PDE4C-208ENST00000595343 ZNF865P0CJ78 1059 aaPredicted RBP22.37■■□□□ 1.17
PDE4C-208ENST00000595343 ITGB8P26012 769 aa22.37■■□□□ 1.17
PDE4C-208ENST00000595343 COPB2P35606 906 aa22.37■■□□□ 1.17
PDE4C-208ENST00000595343 SMAD3P84022 425 aaKnown RBP22.37■■□□□ 1.17
PDE4C-208ENST00000595343 MIER1Q8N108 512 aa22.37■■□□□ 1.17
PDE4C-208ENST00000595343 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.37■■□□□ 1.17
PDE4C-208ENST00000595343 PUS7LQ9H0K6 701 aaKnown RBP22.37■■□□□ 1.17
PDE4C-208ENST00000595343 ROBO3Q96MS0 1386 aa22.37■■□□□ 1.17
PDE4C-208ENST00000595343 CLTBP09497 229 aa22.36■■□□□ 1.17
PDE4C-208ENST00000595343 ZSCAN25Q6NSZ9 544 aa22.36■■□□□ 1.17
PDE4C-208ENST00000595343 PLXNA1Q9UIW2 1896 aa22.36■■□□□ 1.17
PDE4C-208ENST00000595343 MYH7P12883 1935 aa22.35■■□□□ 1.17
PDE4C-208ENST00000595343 A0A1W2PQ45 241 aaPredicted RBP22.35■■□□□ 1.17
PDE4C-208ENST00000595343 A0A1W2PQY0 241 aa22.35■■□□□ 1.17
PDE4C-208ENST00000595343 AKR1A1P14550 325 aa22.35■■□□□ 1.17
PDE4C-208ENST00000595343 TTYH1Q9H313 450 aaPredicted RBP22.35■■□□□ 1.17
PDE4C-208ENST00000595343 ARPP21Q9UBL0 812 aaPredicted RBP22.35■■□□□ 1.17
PDE4C-208ENST00000595343 CNPY2Q9Y2B0 182 aa22.35■■□□□ 1.17
PDE4C-208ENST00000595343 LENG1Q96BZ8 264 aaPredicted RBP22.34■■□□□ 1.17
PDE4C-208ENST00000595343 KIAA0355O15063 1070 aa22.33■■□□□ 1.17
PDE4C-208ENST00000595343 PQBP1O60828 265 aaKnown RBP22.33■■□□□ 1.17
PDE4C-208ENST00000595343 ADAMTS4O75173 837 aa22.33■■□□□ 1.17
PDE4C-208ENST00000595343 EPHB4P54760 987 aa22.33■■□□□ 1.17
PDE4C-208ENST00000595343 MAFAQ8NHW3 353 aaPredicted RBP22.33■■□□□ 1.17
PDE4C-208ENST00000595343 NUP88Q99567 741 aaPredicted RBP22.33■■□□□ 1.17
PDE4C-208ENST00000595343 SLF1Q9BQI6 1058 aa22.33■■□□□ 1.17
PDE4C-208ENST00000595343 TEX13BQ9BXU2 312 aa22.33■■□□□ 1.17
PDE4C-208ENST00000595343 GREB1LQ9C091 1923 aaPredicted RBP22.32■■□□□ 1.16
PDE4C-208ENST00000595343 RAG1P15918 1043 aa22.32■■□□□ 1.16
PDE4C-208ENST00000595343 RASA1P20936 1047 aa22.32■■□□□ 1.16
PDE4C-208ENST00000595343 SBK1Q52WX2 424 aa22.32■■□□□ 1.16
PDE4C-208ENST00000595343 SNRNP48Q6IEG0 339 aaKnown RBP22.32■■□□□ 1.16
PDE4C-208ENST00000595343 MSL3Q8N5Y2 521 aaKnown RBP22.32■■□□□ 1.16
PDE4C-208ENST00000595343 MYLIPQ8WY64 445 aa22.32■■□□□ 1.16
PDE4C-208ENST00000595343 RNPC3Q96LT9 517 aaKnown RBP22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms