RNA–Protein interactions for RNA: ENST00000595235.5

SSX4B-201, Transcript of SSX family member 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX4B, Length 1,221 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4B-201ENST00000595235 RAD21O60216 631 aa6.98□□□□□ -1.29
SSX4B-201ENST00000595235 FLOT1O75955 427 aa6.98□□□□□ -1.29
SSX4B-201ENST00000595235 SGPL1O95470 568 aa6.98□□□□□ -1.29
SSX4B-201ENST00000595235 XRCC5P13010 732 aaKnown RBP6.98□□□□□ -1.29
SSX4B-201ENST00000595235 RGS2P41220 211 aa6.98□□□□□ -1.29
SSX4B-201ENST00000595235 CCNA1P78396 465 aa6.98□□□□□ -1.29
SSX4B-201ENST00000595235 CTDSPL2Q05D32 466 aa6.98□□□□□ -1.29
SSX4B-201ENST00000595235 MAP2K5Q13163 448 aa6.98□□□□□ -1.29
SSX4B-201ENST00000595235 NMIQ13287 307 aaPredicted RBP6.98□□□□□ -1.29
SSX4B-201ENST00000595235 FAM83BQ5T0W9 1011 aa6.98□□□□□ -1.29
SSX4B-201ENST00000595235 WDR78Q5VTH9 848 aa6.98□□□□□ -1.29
SSX4B-201ENST00000595235 UBE2Q1Q7Z7E8 422 aa6.98□□□□□ -1.29
SSX4B-201ENST00000595235 ZNF589Q86UQ0 364 aaPredicted RBP6.98□□□□□ -1.29
SSX4B-201ENST00000595235 RASEFQ8IZ41 740 aa6.98□□□□□ -1.29
SSX4B-201ENST00000595235 NPLOC4Q8TAT6 608 aa6.98□□□□□ -1.29
SSX4B-201ENST00000595235 NKX2-3Q8TAU0 364 aa6.98□□□□□ -1.29
SSX4B-201ENST00000595235 RILPL2Q969X0 211 aa6.98□□□□□ -1.29
SSX4B-201ENST00000595235 CEP95Q96GE4 821 aa6.98□□□□□ -1.29
SSX4B-201ENST00000595235 DCBLD2Q96PD2 775 aa6.98□□□□□ -1.29
SSX4B-201ENST00000595235 DEFB118Q96PH6 123 aa6.98□□□□□ -1.29
SSX4B-201ENST00000595235 NUP88Q99567 741 aaPredicted RBP6.98□□□□□ -1.29
SSX4B-201ENST00000595235 APBA2Q99767 749 aa6.98□□□□□ -1.29
SSX4B-201ENST00000595235 MOV10L1Q9BXT6 1211 aaKnown RBP6.98□□□□□ -1.29
SSX4B-201ENST00000595235 NACAP1Q9BZK3 213 aa6.98□□□□□ -1.29
SSX4B-201ENST00000595235 INCENPQ9NQS7 918 aa6.98□□□□□ -1.29
SSX4B-201ENST00000595235 HELLSQ9NRZ9 838 aa6.98□□□□□ -1.29
SSX4B-201ENST00000595235 FBXO28Q9NVF7 368 aa6.98□□□□□ -1.29
SSX4B-201ENST00000595235 FLRT1Q9NZU1 646 aa6.98□□□□□ -1.29
SSX4B-201ENST00000595235 NYAP2Q9P242 653 aa6.98□□□□□ -1.29
SSX4B-201ENST00000595235 PLXNA1Q9UIW2 1896 aa6.98□□□□□ -1.29
SSX4B-201ENST00000595235 SLC15A5A6NIM6 579 aa6.97□□□□□ -1.29
SSX4B-201ENST00000595235 TRIM6-TRIM34B2RNG4 842 aa6.97□□□□□ -1.29
SSX4B-201ENST00000595235 FARP2O94887 1054 aaPredicted RBP6.97□□□□□ -1.29
SSX4B-201ENST00000595235 NDUFB10O96000 172 aa6.97□□□□□ -1.29
SSX4B-201ENST00000595235 ZKSCAN1P17029 563 aaPredicted RBP6.97□□□□□ -1.29
SSX4B-201ENST00000595235 ERCC3P19447 782 aa6.97□□□□□ -1.29
SSX4B-201ENST00000595235 PTPREP23469 700 aa6.97□□□□□ -1.29
SSX4B-201ENST00000595235 PDE4AP27815 886 aa6.97□□□□□ -1.29
SSX4B-201ENST00000595235 CACNB2Q08289 660 aaPredicted RBP6.97□□□□□ -1.29
SSX4B-201ENST00000595235 GRB14Q14449 540 aa6.97□□□□□ -1.29
SSX4B-201ENST00000595235 TMEM132BQ14DG7 1078 aa6.97□□□□□ -1.29
SSX4B-201ENST00000595235 MCMDC2Q4G0Z9 681 aa6.97□□□□□ -1.29
SSX4B-201ENST00000595235 FAM47AQ5JRC9 791 aa6.97□□□□□ -1.29
SSX4B-201ENST00000595235 MAP3K21Q5TCX8 1036 aa6.97□□□□□ -1.29
SSX4B-201ENST00000595235 CCAR1Q8IX12 1150 aaKnown RBP6.97□□□□□ -1.29
SSX4B-201ENST00000595235 LRRC47Q8N1G4 583 aaKnown RBP6.97□□□□□ -1.29
SSX4B-201ENST00000595235 REPS2Q8NFH8 660 aa6.97□□□□□ -1.29
SSX4B-201ENST00000595235 NEDD1Q8NHV4 660 aa6.97□□□□□ -1.29
SSX4B-201ENST00000595235 DIS3LQ8TF46 1054 aaKnown RBP6.97□□□□□ -1.29
SSX4B-201ENST00000595235 SPATC1LQ9H0A9 340 aa6.97□□□□□ -1.29
SSX4B-201ENST00000595235 CRISPLD2Q9H0B8 497 aa6.97□□□□□ -1.29
SSX4B-201ENST00000595235 OSBPL3Q9H4L5 887 aa6.97□□□□□ -1.29
SSX4B-201ENST00000595235 CWC22Q9HCG8 908 aaKnown RBP6.97□□□□□ -1.29
SSX4B-201ENST00000595235 GOPCQ9HD26 462 aa6.97□□□□□ -1.29
SSX4B-201ENST00000595235 HOXC10Q9NYD6 342 aa6.97□□□□□ -1.29
SSX4B-201ENST00000595235 CLIP2Q9UDT6 1046 aa6.97□□□□□ -1.29
SSX4B-201ENST00000595235 ADAMTS5Q9UNA0 930 aa6.97□□□□□ -1.29
SSX4B-201ENST00000595235 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.97□□□□□ -1.29
SSX4B-201ENST00000595235 CCDC171Q6TFL3 1326 aa6.97□□□□□ -1.29
SSX4B-201ENST00000595235 RPTORQ8N122 1335 aa6.97□□□□□ -1.29
SSX4B-201ENST00000595235 ZNFX1Q9P2E3 1918 aaKnown RBP6.96□□□□□ -1.3
SSX4B-201ENST00000595235 F5H6K3 240 aa6.96□□□□□ -1.3
SSX4B-201ENST00000595235 VWA5AO00534 786 aa6.96□□□□□ -1.3
SSX4B-201ENST00000595235 NMT2O60551 498 aa6.96□□□□□ -1.3
SSX4B-201ENST00000595235 TTLL1O95922 423 aa6.96□□□□□ -1.3
SSX4B-201ENST00000595235 TFRCP02786 760 aaKnown RBP6.96□□□□□ -1.3
SSX4B-201ENST00000595235 TSPY3P0CV98 308 aa6.96□□□□□ -1.3
SSX4B-201ENST00000595235 TSPY8P0CW00 308 aa6.96□□□□□ -1.3
SSX4B-201ENST00000595235 HSPD1P10809 573 aaKnown RBP6.96□□□□□ -1.3
SSX4B-201ENST00000595235 SDSP20132 328 aa6.96□□□□□ -1.3
SSX4B-201ENST00000595235 ADORA2AP29274 412 aa6.96□□□□□ -1.3
SSX4B-201ENST00000595235 CCND3P30281 292 aaPredicted RBP6.96□□□□□ -1.3
SSX4B-201ENST00000595235 TFAP4Q01664 338 aa6.96□□□□□ -1.3
SSX4B-201ENST00000595235 PDE4BQ07343 736 aa6.96□□□□□ -1.3
SSX4B-201ENST00000595235 KLRC3Q07444 240 aa6.96□□□□□ -1.3
SSX4B-201ENST00000595235 PLS1Q14651 629 aa6.96□□□□□ -1.3
SSX4B-201ENST00000595235 RASGRP2Q7LDG7 609 aa6.96□□□□□ -1.3
SSX4B-201ENST00000595235 NCAPG2Q86XI2 1143 aa6.96□□□□□ -1.3
SSX4B-201ENST00000595235 ZNF444Q8N0Y2 327 aaPredicted RBP6.96□□□□□ -1.3
SSX4B-201ENST00000595235 MB21D1Q8N884 522 aa6.96□□□□□ -1.3
SSX4B-201ENST00000595235 SHCBP1Q8NEM2 672 aa6.96□□□□□ -1.3
SSX4B-201ENST00000595235 NBPF3Q9H094 633 aa6.96□□□□□ -1.3
SSX4B-201ENST00000595235 ZNF287Q9HBT7 754 aa6.96□□□□□ -1.3
SSX4B-201ENST00000595235 HMX1Q9NP08 348 aaPredicted RBP6.96□□□□□ -1.3
SSX4B-201ENST00000595235 MTMR4Q9NYA4 1195 aa6.96□□□□□ -1.3
SSX4B-201ENST00000595235 ANAPC4Q9UJX5 808 aa6.96□□□□□ -1.3
SSX4B-201ENST00000595235 ZNF214Q9UL59 606 aaPredicted RBP6.96□□□□□ -1.3
SSX4B-201ENST00000595235 PPP1R9AQ9ULJ8 1098 aa6.96□□□□□ -1.3
SSX4B-201ENST00000595235 IVNS1ABPQ9Y6Y0 642 aa6.96□□□□□ -1.3
SSX4B-201ENST00000595235 KIAA0100Q14667 2235 aaKnown RBP6.95□□□□□ -1.3
SSX4B-201ENST00000595235 TSPY2A6NKD2 308 aa6.95□□□□□ -1.3
SSX4B-201ENST00000595235 COBLO75128 1261 aa6.95□□□□□ -1.3
SSX4B-201ENST00000595235 IGHA2P01877 340 aa6.95□□□□□ -1.3
SSX4B-201ENST00000595235 FGAP02671 866 aa6.95□□□□□ -1.3
SSX4B-201ENST00000595235 SLC3A2P08195 630 aaKnown RBP6.95□□□□□ -1.3
SSX4B-201ENST00000595235 HOXC6P09630 235 aa6.95□□□□□ -1.3
SSX4B-201ENST00000595235 GSPT1P15170 499 aaKnown RBP6.95□□□□□ -1.3
SSX4B-201ENST00000595235 HAND2P61296 217 aa6.95□□□□□ -1.3
SSX4B-201ENST00000595235 ALX1Q15699 326 aa6.95□□□□□ -1.3
SSX4B-201ENST00000595235 TBC1D10CQ8IV04 446 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms