RNA–Protein interactions for RNA: ENST00000595231.5

SNRNP70-204, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 1,673 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-204ENST00000595231 ZNF654Q8IZM8 581 aa26.38■■□□□ 1.81
SNRNP70-204ENST00000595231 DCAF4Q8WV16 495 aa26.38■■□□□ 1.81
SNRNP70-204ENST00000595231 ZCCHC17Q9NP64 241 aaKnown RBP26.38■■□□□ 1.81
SNRNP70-204ENST00000595231 USP17L15C9J2P7 530 aa26.38■■□□□ 1.81
SNRNP70-204ENST00000595231 USP17L13C9JLJ4 530 aa26.38■■□□□ 1.81
SNRNP70-204ENST00000595231 USP17L11C9JVI0 530 aa26.38■■□□□ 1.81
SNRNP70-204ENST00000595231 USP17L18D6R9N7 530 aa26.38■■□□□ 1.81
SNRNP70-204ENST00000595231 USP17L22D6RA61 530 aa26.38■■□□□ 1.81
SNRNP70-204ENST00000595231 USP17L17D6RBQ6 530 aa26.38■■□□□ 1.81
SNRNP70-204ENST00000595231 USP17L19D6RCP7 530 aa26.38■■□□□ 1.81
SNRNP70-204ENST00000595231 USP17L20D6RJB6 530 aa26.38■■□□□ 1.81
SNRNP70-204ENST00000595231 USP17L24Q0WX57 530 aa26.38■■□□□ 1.81
SNRNP70-204ENST00000595231 CATIPQ7Z7H3 387 aa26.38■■□□□ 1.81
SNRNP70-204ENST00000595231 EVCP57679 992 aa26.37■■□□□ 1.81
SNRNP70-204ENST00000595231 APOBRQ0VD83 1088 aa26.37■■□□□ 1.81
SNRNP70-204ENST00000595231 OTUD7BQ6GQQ9 843 aa26.37■■□□□ 1.81
SNRNP70-204ENST00000595231 APOA5Q6Q788 366 aa26.37■■□□□ 1.81
SNRNP70-204ENST00000595231 KCTD1Q719H9 257 aa26.37■■□□□ 1.81
SNRNP70-204ENST00000595231 MYL10Q9BUA6 226 aa26.37■■□□□ 1.81
SNRNP70-204ENST00000595231 ASCC2Q9H1I8 757 aaPredicted RBP26.37■■□□□ 1.81
SNRNP70-204ENST00000595231 SLC12A7Q9Y666 1083 aa26.37■■□□□ 1.81
SNRNP70-204ENST00000595231 RLFQ13129 1914 aa26.36■■□□□ 1.81
SNRNP70-204ENST00000595231 ZNF543Q08ER8 600 aa26.36■■□□□ 1.81
SNRNP70-204ENST00000595231 PABPC4Q13310 644 aaKnown RBP eCLIP26.36■■□□□ 1.814e-9■■■□□ 19.1
SNRNP70-204ENST00000595231 TANGO6Q9C0B7 1094 aa26.36■■□□□ 1.81
SNRNP70-204ENST00000595231 DDAH1O94760 285 aa26.35■■□□□ 1.81
SNRNP70-204ENST00000595231 AK2P54819 239 aa26.35■■□□□ 1.81
SNRNP70-204ENST00000595231 RABEP1Q15276 862 aa26.35■■□□□ 1.81
SNRNP70-204ENST00000595231 FBXO28Q9NVF7 368 aa26.35■■□□□ 1.81
SNRNP70-204ENST00000595231 PARP14Q460N5 1801 aa26.35■■□□□ 1.81
SNRNP70-204ENST00000595231 KLF18A0A0U1RQI7 1052 aa26.34■■□□□ 1.81
SNRNP70-204ENST00000595231 CYP2C8P10632 490 aa26.34■■□□□ 1.81
SNRNP70-204ENST00000595231 LARP6Q9BRS8 491 aaKnown RBP26.34■■□□□ 1.81
SNRNP70-204ENST00000595231 FRMPD2Q68DX3 1309 aaPredicted RBP26.34■■□□□ 1.81
SNRNP70-204ENST00000595231 TMEM232C9JQI7 657 aa26.34■■□□□ 1.81
SNRNP70-204ENST00000595231 GOLGA8HP0CJ92 632 aa26.34■■□□□ 1.81
SNRNP70-204ENST00000595231 COG2Q14746 738 aa26.34■■□□□ 1.81
SNRNP70-204ENST00000595231 TTBK2Q6IQ55 1244 aa26.34■■□□□ 1.81
SNRNP70-204ENST00000595231 NUP133Q8WUM0 1156 aa26.34■■□□□ 1.81
SNRNP70-204ENST00000595231 MAP3K14Q99558 947 aa26.34■■□□□ 1.81
SNRNP70-204ENST00000595231 P2RX7Q99572 595 aaKnown RBP26.34■■□□□ 1.81
SNRNP70-204ENST00000595231 RNF186Q9NXI6 227 aa26.34■■□□□ 1.81
SNRNP70-204ENST00000595231 MAD2L2Q9UI95 211 aa26.34■■□□□ 1.81
SNRNP70-204ENST00000595231 FLOT1O75955 427 aa26.33■■□□□ 1.81
SNRNP70-204ENST00000595231 ALDH1A1P00352 501 aa26.33■■□□□ 1.81
SNRNP70-204ENST00000595231 RXRAP19793 462 aa26.33■■□□□ 1.81
SNRNP70-204ENST00000595231 OSBPP22059 807 aa26.33■■□□□ 1.81
SNRNP70-204ENST00000595231 GRM4Q14833 912 aa26.33■■□□□ 1.81
SNRNP70-204ENST00000595231 CCDC96Q2M329 555 aa26.33■■□□□ 1.81
SNRNP70-204ENST00000595231 GPATCH4Q5T3I0 446 aaKnown RBP26.33■■□□□ 1.81
SNRNP70-204ENST00000595231 POTEEQ6S8J3 1075 aa26.33■■□□□ 1.81
SNRNP70-204ENST00000595231 RAB11FIP4Q86YS3 637 aa26.33■■□□□ 1.81
SNRNP70-204ENST00000595231 STAG2Q8N3U4 1231 aa26.33■■□□□ 1.81
SNRNP70-204ENST00000595231 GPCPD1Q9NPB8 672 aa26.33■■□□□ 1.81
SNRNP70-204ENST00000595231 PALM3A6NDB9 673 aaPredicted RBP26.32■■□□□ 1.8
SNRNP70-204ENST00000595231 PLA2G6O60733 806 aa26.32■■□□□ 1.8
SNRNP70-204ENST00000595231 PARP1P09874 1014 aaKnown RBP26.32■■□□□ 1.8
SNRNP70-204ENST00000595231 IRX3P78415 501 aaPredicted RBP26.32■■□□□ 1.8
SNRNP70-204ENST00000595231 MAP2K1Q02750 393 aaPredicted RBP26.32■■□□□ 1.8
SNRNP70-204ENST00000595231 JMYQ8N9B5 988 aa26.32■■□□□ 1.8
SNRNP70-204ENST00000595231 FEM1BQ9UK73 627 aa26.32■■□□□ 1.8
SNRNP70-204ENST00000595231 PNMA3Q9UL41 463 aa26.32■■□□□ 1.8
SNRNP70-204ENST00000595231 CALM1P0DP23 149 aa26.31■■□□□ 1.8
SNRNP70-204ENST00000595231 CALM2P0DP24 149 aa26.31■■□□□ 1.8
SNRNP70-204ENST00000595231 CALM3P0DP25 149 aa26.31■■□□□ 1.8
SNRNP70-204ENST00000595231 TAF1CQ15572 869 aaPredicted RBP26.31■■□□□ 1.8
SNRNP70-204ENST00000595231 ASPRV1Q53RT3 343 aa26.31■■□□□ 1.8
SNRNP70-204ENST00000595231 BTNL9Q6UXG8 535 aa26.31■■□□□ 1.8
SNRNP70-204ENST00000595231 SYNE3Q6ZMZ3 975 aa26.31■■□□□ 1.8
SNRNP70-204ENST00000595231 MICU3Q86XE3 530 aa26.31■■□□□ 1.8
SNRNP70-204ENST00000595231 HPS5Q9UPZ3 1129 aa26.31■■□□□ 1.8
SNRNP70-204ENST00000595231 SPDYE16A6NNV3 312 aaPredicted RBP26.31■■□□□ 1.8
SNRNP70-204ENST00000595231 ZBTB43O43298 467 aa26.31■■□□□ 1.8
SNRNP70-204ENST00000595231 CA12O43570 354 aa26.31■■□□□ 1.8
SNRNP70-204ENST00000595231 PDIA3P30101 505 aaKnown RBP26.31■■□□□ 1.8
SNRNP70-204ENST00000595231 DSG3P32926 999 aa26.31■■□□□ 1.8
SNRNP70-204ENST00000595231 STAT2P52630 851 aa26.31■■□□□ 1.8
SNRNP70-204ENST00000595231 HERVK_113P62684 666 aa26.31■■□□□ 1.8
SNRNP70-204ENST00000595231 ANKRD1Q15327 319 aa26.31■■□□□ 1.8
SNRNP70-204ENST00000595231 FANCBQ8NB91 859 aa26.31■■□□□ 1.8
SNRNP70-204ENST00000595231 WBP1LQ9NX94 342 aa26.31■■□□□ 1.8
SNRNP70-204ENST00000595231 HOXC10Q9NYD6 342 aa26.31■■□□□ 1.8
SNRNP70-204ENST00000595231 PPP1R9AQ9ULJ8 1098 aa26.31■■□□□ 1.8
SNRNP70-204ENST00000595231 TRPA1O75762 1119 aa26.3■■□□□ 1.8
SNRNP70-204ENST00000595231 SLC16A2P36021 539 aa26.3■■□□□ 1.8
SNRNP70-204ENST00000595231 RCAN1P53805 252 aa26.3■■□□□ 1.8
SNRNP70-204ENST00000595231 CRHR2Q13324 411 aa26.3■■□□□ 1.8
SNRNP70-204ENST00000595231 CCDC144CPQ8IYA2 1237 aa26.3■■□□□ 1.8
SNRNP70-204ENST00000595231 PRPF38AQ8NAV1 312 aaKnown RBP26.3■■□□□ 1.8
SNRNP70-204ENST00000595231 ZNF274Q96GC6 653 aaPredicted RBP26.3■■□□□ 1.8
SNRNP70-204ENST00000595231 PARK7Q99497 189 aaKnown RBP26.3■■□□□ 1.8
SNRNP70-204ENST00000595231 SLF1Q9BQI6 1058 aa26.3■■□□□ 1.8
SNRNP70-204ENST00000595231 CFHR5Q9BXR6 569 aa26.3■■□□□ 1.8
SNRNP70-204ENST00000595231 R3HDMLQ9H3Y0 253 aa26.3■■□□□ 1.8
SNRNP70-204ENST00000595231 TPCN1Q9ULQ1 816 aa26.3■■□□□ 1.8
SNRNP70-204ENST00000595231 ISY1Q9ULR0 285 aaKnown RBP26.3■■□□□ 1.8
SNRNP70-204ENST00000595231 ADAMTS5Q9UNA0 930 aa26.3■■□□□ 1.8
SNRNP70-204ENST00000595231 MYPNQ86TC9 1320 aa26.3■■□□□ 1.8
SNRNP70-204ENST00000595231 LBX2Q6XYB7 198 aa26.29■■□□□ 1.8
SNRNP70-204ENST00000595231 CHURC1Q8WUH1 139 aa26.29■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms