RNA–Protein interactions for RNA: ENST00000593089.1

TRIM47-207, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 392 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-207ENST00000593089 ZNFX1Q9P2E3 1918 aaKnown RBP24.53■■□□□ 1.52
TRIM47-207ENST00000593089 MINDY4BA8MYZ0 360 aa24.52■■□□□ 1.52
TRIM47-207ENST00000593089 RNF113AO15541 343 aaKnown RBP24.52■■□□□ 1.52
TRIM47-207ENST00000593089 SBK1Q52WX2 424 aa24.52■■□□□ 1.52
TRIM47-207ENST00000593089 FAM83BQ5T0W9 1011 aa24.52■■□□□ 1.52
TRIM47-207ENST00000593089 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.52■■□□□ 1.52
TRIM47-207ENST00000593089 MKNK2Q9HBH9 465 aa24.52■■□□□ 1.52
TRIM47-207ENST00000593089 FCER1AP12319 257 aa24.51■■□□□ 1.51
TRIM47-207ENST00000593089 RASA1P20936 1047 aa24.51■■□□□ 1.51
TRIM47-207ENST00000593089 ANO1Q5XXA6 986 aa24.51■■□□□ 1.51
TRIM47-207ENST00000593089 ABRAQ8N0Z2 381 aa24.51■■□□□ 1.51
TRIM47-207ENST00000593089 UBE2OQ9C0C9 1292 aaKnown RBP24.51■■□□□ 1.51
TRIM47-207ENST00000593089 ADAMTS5Q9UNA0 930 aa24.51■■□□□ 1.51
TRIM47-207ENST00000593089 DNM1LO00429 736 aa24.5■■□□□ 1.51
TRIM47-207ENST00000593089 GPAA1O43292 621 aa24.5■■□□□ 1.51
TRIM47-207ENST00000593089 SLC25A27O95847 323 aa24.5■■□□□ 1.51
TRIM47-207ENST00000593089 ATN1P54259 1190 aaPredicted RBP24.5■■□□□ 1.51
TRIM47-207ENST00000593089 PRAMEF19Q5SWL8 479 aa24.5■■□□□ 1.51
TRIM47-207ENST00000593089 GJC2Q5T442 439 aaPredicted RBP24.5■■□□□ 1.51
TRIM47-207ENST00000593089 GIMAP6Q6P9H5 292 aa24.5■■□□□ 1.51
TRIM47-207ENST00000593089 MAML3Q96JK9 1138 aa24.5■■□□□ 1.51
TRIM47-207ENST00000593089 M0R2C6 588 aa24.49■■□□□ 1.51
TRIM47-207ENST00000593089 ZFYP08048 801 aaPredicted RBP24.49■■□□□ 1.51
TRIM47-207ENST00000593089 TDO2P48775 406 aa24.49■■□□□ 1.51
TRIM47-207ENST00000593089 MMP19Q99542 508 aa24.49■■□□□ 1.51
TRIM47-207ENST00000593089 EPB41L4AQ9HCS5 686 aaPredicted RBP24.49■■□□□ 1.51
TRIM47-207ENST00000593089 PPP1R9AQ9ULJ8 1098 aa24.49■■□□□ 1.51
TRIM47-207ENST00000593089 ROBO3Q96MS0 1386 aa24.49■■□□□ 1.51
TRIM47-207ENST00000593089 VWA5AO00534 786 aa24.48■■□□□ 1.51
TRIM47-207ENST00000593089 SEPT4O43236 478 aa24.48■■□□□ 1.51
TRIM47-207ENST00000593089 MYCNP04198 464 aaPredicted RBP24.48■■□□□ 1.51
TRIM47-207ENST00000593089 APPP05067 770 aa24.48■■□□□ 1.51
TRIM47-207ENST00000593089 MDM2Q00987 491 aaPredicted RBP24.48■■□□□ 1.51
TRIM47-207ENST00000593089 LAMA3Q16787 3333 aa24.48■■□□□ 1.51
TRIM47-207ENST00000593089 RIOX2Q8IUF8 465 aa24.48■■□□□ 1.51
TRIM47-207ENST00000593089 TDHQ8IZJ6 230 aa24.48■■□□□ 1.51
TRIM47-207ENST00000593089 ARRDC4Q8NCT1 418 aa24.48■■□□□ 1.51
TRIM47-207ENST00000593089 NUP88Q99567 741 aaPredicted RBP24.48■■□□□ 1.51
TRIM47-207ENST00000593089 PGK2P07205 417 aa24.47■■□□□ 1.51
TRIM47-207ENST00000593089 STAT3P40763 770 aa24.47■■□□□ 1.51
TRIM47-207ENST00000593089 PCDHB15Q9Y5E8 787 aa24.47■■□□□ 1.51
TRIM47-207ENST00000593089 MYH4Q9Y623 1939 aa24.47■■□□□ 1.51
TRIM47-207ENST00000593089 PLXNA1Q9UIW2 1896 aa24.47■■□□□ 1.51
TRIM47-207ENST00000593089 KBTBD13C9JR72 458 aa24.46■■□□□ 1.51
TRIM47-207ENST00000593089 GNAT2P19087 354 aa24.46■■□□□ 1.51
TRIM47-207ENST00000593089 KCTD2Q14681 263 aa24.46■■□□□ 1.51
TRIM47-207ENST00000593089 NYAP2Q9P242 653 aa24.46■■□□□ 1.51
TRIM47-207ENST00000593089 ZNF214Q9UL59 606 aaPredicted RBP24.46■■□□□ 1.51
TRIM47-207ENST00000593089 TTC41PQ6P2S7 1318 aa24.45■■□□□ 1.5
TRIM47-207ENST00000593089 PRDM1O75626 825 aa24.45■■□□□ 1.5
TRIM47-207ENST00000593089 LRRFIP1Q32MZ4 808 aaKnown RBP24.45■■□□□ 1.5
TRIM47-207ENST00000593089 REPS2Q8NFH8 660 aa24.45■■□□□ 1.5
TRIM47-207ENST00000593089 OTUD7AQ8TE49 926 aaPredicted RBP24.45■■□□□ 1.5
TRIM47-207ENST00000593089 SLF1Q9BQI6 1058 aa24.45■■□□□ 1.5
TRIM47-207ENST00000593089 CLIP2Q9UDT6 1046 aa24.45■■□□□ 1.5
TRIM47-207ENST00000593089 F5H6K3 240 aa24.44■■□□□ 1.5
TRIM47-207ENST00000593089 ERC2O15083 957 aa24.44■■□□□ 1.5
TRIM47-207ENST00000593089 NDUFB10O96000 172 aa24.44■■□□□ 1.5
TRIM47-207ENST00000593089 RTP1P59025 263 aa24.44■■□□□ 1.5
TRIM47-207ENST00000593089 KLRC3Q07444 240 aa24.44■■□□□ 1.5
TRIM47-207ENST00000593089 LRIT3Q3SXY7 679 aa24.44■■□□□ 1.5
TRIM47-207ENST00000593089 IFNL3Q8IZI9 196 aa24.44■■□□□ 1.5
TRIM47-207ENST00000593089 ZNF444Q8N0Y2 327 aaPredicted RBP24.44■■□□□ 1.5
TRIM47-207ENST00000593089 PI4K2BQ8TCG2 481 aa24.44■■□□□ 1.5
TRIM47-207ENST00000593089 SEC62Q99442 399 aaKnown RBP24.44■■□□□ 1.5
TRIM47-207ENST00000593089 ATP11BQ9Y2G3 1177 aa24.44■■□□□ 1.5
TRIM47-207ENST00000593089 PATL2C9JE40 543 aaKnown RBP24.43■■□□□ 1.5
TRIM47-207ENST00000593089 FSD1Q9BTV5 496 aa24.43■■□□□ 1.5
TRIM47-207ENST00000593089 ZNF287Q9HBT7 754 aa24.43■■□□□ 1.5
TRIM47-207ENST00000593089 IGKV6D-41A0A0C4DH26 115 aa24.42■■□□□ 1.5
TRIM47-207ENST00000593089 COPB2P35606 906 aa24.42■■□□□ 1.5
TRIM47-207ENST00000593089 ZNF792Q3KQV3 632 aa24.42■■□□□ 1.5
TRIM47-207ENST00000593089 FAM47AQ5JRC9 791 aa24.42■■□□□ 1.5
TRIM47-207ENST00000593089 LBHD1Q9BQE6 289 aaPredicted RBP24.42■■□□□ 1.5
TRIM47-207ENST00000593089 TINF2Q9BSI4 451 aa24.42■■□□□ 1.5
TRIM47-207ENST00000593089 PRKAG2Q9UGJ0 569 aa24.42■■□□□ 1.5
TRIM47-207ENST00000593089 SMCHD1A6NHR9 2005 aa24.41■■□□□ 1.5
TRIM47-207ENST00000593089 SLC4A3P48751 1232 aa24.41■■□□□ 1.5
TRIM47-207ENST00000593089 LRRC41Q15345 812 aa24.41■■□□□ 1.5
TRIM47-207ENST00000593089 SNRNP48Q6IEG0 339 aaKnown RBP24.41■■□□□ 1.5
TRIM47-207ENST00000593089 SLC39A5Q6ZMH5 540 aa24.41■■□□□ 1.5
TRIM47-207ENST00000593089 CEP95Q96GE4 821 aa24.41■■□□□ 1.5
TRIM47-207ENST00000593089 TEX13BQ9BXU2 312 aa24.41■■□□□ 1.5
TRIM47-207ENST00000593089 NACAP1Q9BZK3 213 aa24.41■■□□□ 1.5
TRIM47-207ENST00000593089 DIS3Q9Y2L1 958 aaKnown RBP24.41■■□□□ 1.5
TRIM47-207ENST00000593089 ADCYAP1R1P41586 468 aa24.4■■□□□ 1.5
TRIM47-207ENST00000593089 LRRC47Q8N1G4 583 aaKnown RBP24.4■■□□□ 1.5
TRIM47-207ENST00000593089 PRPF38AQ8NAV1 312 aaKnown RBP24.4■■□□□ 1.5
TRIM47-207ENST00000593089 FERMT2Q96AC1 680 aa24.4■■□□□ 1.5
TRIM47-207ENST00000593089 NRBP1Q9UHY1 535 aa24.4■■□□□ 1.5
TRIM47-207ENST00000593089 RARBP10826 455 aa24.39■■□□□ 1.49
TRIM47-207ENST00000593089 TAL1P17542 331 aaPredicted RBP24.39■■□□□ 1.49
TRIM47-207ENST00000593089 MX1P20591 662 aa24.39■■□□□ 1.49
TRIM47-207ENST00000593089 GPR153Q6NV75 609 aa24.39■■□□□ 1.49
TRIM47-207ENST00000593089 Q7L0L9 218 aa24.39■■□□□ 1.49
TRIM47-207ENST00000593089 CPXCR1Q8N123 301 aa24.39■■□□□ 1.49
TRIM47-207ENST00000593089 DEFB123Q8N688 67 aa24.39■■□□□ 1.49
TRIM47-207ENST00000593089 KIFC2Q96AC6 838 aa24.39■■□□□ 1.49
TRIM47-207ENST00000593089 NAPBQ9H115 298 aa24.39■■□□□ 1.49
TRIM47-207ENST00000593089 XPNPEP3Q9NQH7 507 aa24.39■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms