RNA–Protein interactions for RNA: ENST00000592927.5

DDX39A-219, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-219ENST00000592927 ANKLE1Q8NAG6 615 aa13.99□□□□□ -0.17
DDX39A-219ENST00000592927 ZBTB21Q9ULJ3 1066 aa13.99□□□□□ -0.17
DDX39A-219ENST00000592927 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.99□□□□□ -0.17
DDX39A-219ENST00000592927 ZHX2Q9Y6X8 837 aa13.99□□□□□ -0.17
DDX39A-219ENST00000592927 TMEM265A0A087WTH1 108 aa13.98□□□□□ -0.17
DDX39A-219ENST00000592927 USP17L5A8MUK1 530 aa13.98□□□□□ -0.17
DDX39A-219ENST00000592927 RANBP6O60518 1105 aaKnown RBP13.98□□□□□ -0.17
DDX39A-219ENST00000592927 TSPY3P0CV98 308 aa13.98□□□□□ -0.17
DDX39A-219ENST00000592927 TSPY8P0CW00 308 aa13.98□□□□□ -0.17
DDX39A-219ENST00000592927 BCRP11274 1271 aa13.98□□□□□ -0.17
DDX39A-219ENST00000592927 MDM2Q00987 491 aaPredicted RBP13.98□□□□□ -0.17
DDX39A-219ENST00000592927 PPATQ06203 517 aa13.98□□□□□ -0.17
DDX39A-219ENST00000592927 TRDNQ13061 729 aa13.98□□□□□ -0.17
DDX39A-219ENST00000592927 SHROOM1Q2M3G4 852 aaPredicted RBP13.98□□□□□ -0.17
DDX39A-219ENST00000592927 TMEM179Q6ZVK1 233 aa13.98□□□□□ -0.17
DDX39A-219ENST00000592927 RASEFQ8IZ41 740 aa13.98□□□□□ -0.17
DDX39A-219ENST00000592927 TBC1D2Q9BYX2 928 aa13.98□□□□□ -0.17
DDX39A-219ENST00000592927 C11orf49Q9H6J7 331 aa13.98□□□□□ -0.17
DDX39A-219ENST00000592927 TACC3Q9Y6A5 838 aa13.98□□□□□ -0.17
DDX39A-219ENST00000592927 TSPY2A6NKD2 308 aa13.97□□□□□ -0.17
DDX39A-219ENST00000592927 NT5C2P49902 561 aa13.97□□□□□ -0.17
DDX39A-219ENST00000592927 NEK4P51957 841 aa13.97□□□□□ -0.17
DDX39A-219ENST00000592927 TFAP4Q01664 338 aa13.97□□□□□ -0.17
DDX39A-219ENST00000592927 SEPT2Q15019 361 aa13.97□□□□□ -0.17
DDX39A-219ENST00000592927 FAM47AQ5JRC9 791 aa13.97□□□□□ -0.17
DDX39A-219ENST00000592927 ESR2Q92731 530 aa13.97□□□□□ -0.17
DDX39A-219ENST00000592927 KRT23Q9C075 422 aa13.97□□□□□ -0.17
DDX39A-219ENST00000592927 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.97□□□□□ -0.179e-7■■■□□ 19
DDX39A-219ENST00000592927 CNNM2Q9H8M5 875 aa13.97□□□□□ -0.17
DDX39A-219ENST00000592927 AS3MTQ9HBK9 375 aa13.97□□□□□ -0.17
DDX39A-219ENST00000592927 ZSWIM6Q9HCJ5 1215 aa13.97□□□□□ -0.17
DDX39A-219ENST00000592927 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.97□□□□□ -0.17
DDX39A-219ENST00000592927 NEDD4P46934 1319 aa13.96□□□□□ -0.17
DDX39A-219ENST00000592927 E7EWF7 191 aa13.96□□□□□ -0.17
DDX39A-219ENST00000592927 K7ELQ4 463 aaPredicted RBP13.96□□□□□ -0.17
DDX39A-219ENST00000592927 HMGB1P09429 215 aaKnown RBP13.96□□□□□ -0.17
DDX39A-219ENST00000592927 CYP2C8P10632 490 aa13.96□□□□□ -0.17
DDX39A-219ENST00000592927 IRF5Q13568 498 aa13.96□□□□□ -0.17
DDX39A-219ENST00000592927 CCDC84Q86UT8 332 aaPredicted RBP13.96□□□□□ -0.17
DDX39A-219ENST00000592927 ZNF280CQ8ND82 737 aa13.96□□□□□ -0.17
DDX39A-219ENST00000592927 NEDD1Q8NHV4 660 aa13.96□□□□□ -0.17
DDX39A-219ENST00000592927 MYLIPQ8WY64 445 aa13.96□□□□□ -0.17
DDX39A-219ENST00000592927 SEMA6BQ9H3T3 888 aa13.96□□□□□ -0.17
DDX39A-219ENST00000592927 KANSL2Q9H9L4 492 aa13.96□□□□□ -0.17
DDX39A-219ENST00000592927 CYP46A1Q9Y6A2 500 aa13.96□□□□□ -0.17
DDX39A-219ENST00000592927 ALPK3Q96L96 1907 aa13.96□□□□□ -0.18
DDX39A-219ENST00000592927 MUC3AQ02505 3323 aa13.95□□□□□ -0.18
DDX39A-219ENST00000592927 B4E1Z4 1266 aa13.95□□□□□ -0.18
DDX39A-219ENST00000592927 CASTP20810 708 aaKnown RBP13.95□□□□□ -0.18
DDX39A-219ENST00000592927 GUCY1A2P33402 732 aa13.95□□□□□ -0.18
DDX39A-219ENST00000592927 ICA1Q05084 483 aa13.95□□□□□ -0.18
DDX39A-219ENST00000592927 SPP2Q13103 211 aa13.95□□□□□ -0.18
DDX39A-219ENST00000592927 MOGSQ13724 837 aa13.95□□□□□ -0.18
DDX39A-219ENST00000592927 TJAP1Q5JTD0 557 aa13.95□□□□□ -0.18
DDX39A-219ENST00000592927 BLOC1S2Q6QNY1 142 aa13.95□□□□□ -0.18
DDX39A-219ENST00000592927 RUFY3Q7L099 469 aa13.95□□□□□ -0.18
DDX39A-219ENST00000592927 RALYLQ86SE5 291 aaKnown RBP13.95□□□□□ -0.18
DDX39A-219ENST00000592927 JAKMIP1Q96N16 626 aaKnown RBP13.95□□□□□ -0.18
DDX39A-219ENST00000592927 PARK7Q99497 189 aaKnown RBP13.95□□□□□ -0.18
DDX39A-219ENST00000592927 WDR18Q9BV38 432 aa13.95□□□□□ -0.18
DDX39A-219ENST00000592927 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.95□□□□□ -0.18
DDX39A-219ENST00000592927 ALDH8A1Q9H2A2 487 aaPredicted RBP13.95□□□□□ -0.18
DDX39A-219ENST00000592927 AFG3L2Q9Y4W6 797 aa13.95□□□□□ -0.18
DDX39A-219ENST00000592927 TAF6LQ9Y6J9 622 aa13.95□□□□□ -0.18
DDX39A-219ENST00000592927 TRIM75PA6NK02 468 aa13.94□□□□□ -0.18
DDX39A-219ENST00000592927 CXCL11O14625 94 aa13.94□□□□□ -0.18
DDX39A-219ENST00000592927 TNPO2O14787 897 aaKnown RBP13.94□□□□□ -0.18
DDX39A-219ENST00000592927 KDM4AO75164 1064 aa13.94□□□□□ -0.18
DDX39A-219ENST00000592927 ATP2B2Q01814 1243 aa13.94□□□□□ -0.18
DDX39A-219ENST00000592927 ADCK5Q3MIX3 580 aa13.94□□□□□ -0.18
DDX39A-219ENST00000592927 PPP4R3BQ5MIZ7 849 aa13.94□□□□□ -0.18
DDX39A-219ENST00000592927 NCOA7Q8NI08 942 aa13.94□□□□□ -0.18
DDX39A-219ENST00000592927 TTC14Q96N46 770 aa13.94□□□□□ -0.18
DDX39A-219ENST00000592927 NEK1Q96PY6 1258 aa13.94□□□□□ -0.18
DDX39A-219ENST00000592927 ARHGEF10LQ9HCE6 1279 aa13.94□□□□□ -0.18
DDX39A-219ENST00000592927 PLIN4Q96Q06 1357 aa13.94□□□□□ -0.18
DDX39A-219ENST00000592927 PRUNE2Q8WUY3 3088 aa13.94□□□□□ -0.18
DDX39A-219ENST00000592927 DOCK1Q14185 1865 aa13.93□□□□□ -0.18
DDX39A-219ENST00000592927 IGKV6D-41A0A0C4DH26 115 aa13.93□□□□□ -0.18
DDX39A-219ENST00000592927 ANKRD1Q15327 319 aa13.93□□□□□ -0.18
DDX39A-219ENST00000592927 GPAT2Q6NUI2 795 aa13.93□□□□□ -0.18
DDX39A-219ENST00000592927 STOX1Q6ZVD7 989 aa13.93□□□□□ -0.18
DDX39A-219ENST00000592927 IQCA1Q86XH1 822 aa13.93□□□□□ -0.18
DDX39A-219ENST00000592927 CLEC10AQ8IUN9 316 aa13.93□□□□□ -0.18
DDX39A-219ENST00000592927 CEP95Q96GE4 821 aa13.93□□□□□ -0.18
DDX39A-219ENST00000592927 FEZ1Q99689 392 aa13.93□□□□□ -0.18
DDX39A-219ENST00000592927 UPF3BQ9BZI7 483 aaKnown RBP13.93□□□□□ -0.18
DDX39A-219ENST00000592927 MTMR4Q9NYA4 1195 aa13.93□□□□□ -0.18
DDX39A-219ENST00000592927 ZSWIM5Q9P217 1185 aa13.93□□□□□ -0.18
DDX39A-219ENST00000592927 KCNH4Q9UQ05 1017 aa13.93□□□□□ -0.18
DDX39A-219ENST00000592927 C19orf81C9J6K1 198 aa13.92□□□□□ -0.18
DDX39A-219ENST00000592927 USP17L10C9JJH3 530 aa13.92□□□□□ -0.18
DDX39A-219ENST00000592927 NMT2O60551 498 aa13.92□□□□□ -0.18
DDX39A-219ENST00000592927 CD2BP2O95400 341 aaKnown RBP13.92□□□□□ -0.18
DDX39A-219ENST00000592927 TTLL1O95922 423 aa13.92□□□□□ -0.18
DDX39A-219ENST00000592927 EEF2P13639 858 aaKnown RBP13.92□□□□□ -0.18
DDX39A-219ENST00000592927 RPS6KB1P23443 525 aa13.92□□□□□ -0.18
DDX39A-219ENST00000592927 BACE1P56817 501 aa13.92□□□□□ -0.18
DDX39A-219ENST00000592927 MTMR2Q13614 643 aa13.92□□□□□ -0.18
DDX39A-219ENST00000592927 CCDC178Q5BJE1 867 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms