RNA–Protein interactions for RNA: ENST00000592771.5

RANBP3-229, Transcript of RAN binding protein 3, humanhuman

TSL 1 (best)

Gene RANBP3, Length 1,937 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-229ENST00000592771 TNFRSF25Q93038 417 aa16.29■□□□□ 0.2
RANBP3-229ENST00000592771 ARID3AQ99856 593 aa16.29■□□□□ 0.2
RANBP3-229ENST00000592771 TMX4Q9H1E5 349 aaPredicted RBP16.29■□□□□ 0.2
RANBP3-229ENST00000592771 HOOK1Q9UJC3 728 aaKnown RBP16.29■□□□□ 0.2
RANBP3-229ENST00000592771 TAOK2Q9UL54 1235 aa16.29■□□□□ 0.2
RANBP3-229ENST00000592771 SCG2P13521 617 aa16.28■□□□□ 0.2
RANBP3-229ENST00000592771 KRT2P35908 639 aa16.28■□□□□ 0.2
RANBP3-229ENST00000592771 NOVP48745 357 aa16.28■□□□□ 0.2
RANBP3-229ENST00000592771 MYL5Q02045 173 aa16.28■□□□□ 0.2
RANBP3-229ENST00000592771 PFKFB3Q16875 520 aaPredicted RBP16.28■□□□□ 0.2
RANBP3-229ENST00000592771 TMC6Q7Z403 805 aa16.28■□□□□ 0.2
RANBP3-229ENST00000592771 L2HGDHQ9H9P8 463 aa16.28■□□□□ 0.2
RANBP3-229ENST00000592771 PLIN4Q96Q06 1357 aa16.28■□□□□ 0.2
RANBP3-229ENST00000592771 hCG_1642624A0A1W2PR95 340 aa16.27■□□□□ 0.2
RANBP3-229ENST00000592771 PTPREP23469 700 aa16.27■□□□□ 0.2
RANBP3-229ENST00000592771 FANCCQ00597 558 aa16.27■□□□□ 0.2
RANBP3-229ENST00000592771 ARMCX5Q6P1M9 558 aa16.27■□□□□ 0.2
RANBP3-229ENST00000592771 FCHSD1Q86WN1 690 aa16.27■□□□□ 0.2
RANBP3-229ENST00000592771 KRI1Q8N9T8 703 aaKnown RBP16.27■□□□□ 0.2
RANBP3-229ENST00000592771 ERCC4Q92889 916 aaPredicted RBP16.27■□□□□ 0.2
RANBP3-229ENST00000592771 ZNF622Q969S3 477 aaKnown RBP eCLIP16.27■□□□□ 0.21e-6■□□□□ 9.6
RANBP3-229ENST00000592771 DDX41Q9UJV9 622 aaKnown RBP16.27■□□□□ 0.2
RANBP3-229ENST00000592771 H0YIN7 160 aa16.27■□□□□ 0.19
RANBP3-229ENST00000592771 GNAQP50148 359 aa16.27■□□□□ 0.19
RANBP3-229ENST00000592771 FKBP1AP62942 108 aaKnown RBP16.27■□□□□ 0.19
RANBP3-229ENST00000592771 DOK7Q18PE1 504 aa16.27■□□□□ 0.19
RANBP3-229ENST00000592771 E4F1Q66K89 784 aaPredicted RBP16.27■□□□□ 0.19
RANBP3-229ENST00000592771 HHIPL2Q6UWX4 724 aa16.27■□□□□ 0.19
RANBP3-229ENST00000592771 PODNQ7Z5L7 613 aa16.27■□□□□ 0.19
RANBP3-229ENST00000592771 TMEM47Q9BQJ4 181 aa16.27■□□□□ 0.19
RANBP3-229ENST00000592771 FBXO2Q9UK22 296 aaPredicted RBP16.27■□□□□ 0.19
RANBP3-229ENST00000592771 TTF2Q9UNY4 1162 aaKnown RBP16.27■□□□□ 0.19
RANBP3-229ENST00000592771 ADAMTSL1Q8N6G6 1762 aa16.27■□□□□ 0.19
RANBP3-229ENST00000592771 A0A087WWV3 80 aa16.26■□□□□ 0.19
RANBP3-229ENST00000592771 GABPAQ06546 454 aa16.26■□□□□ 0.19
RANBP3-229ENST00000592771 ZNF579Q8NAF0 562 aaKnown RBP16.26■□□□□ 0.19
RANBP3-229ENST00000592771 CLIC6Q96NY7 704 aa16.26■□□□□ 0.19
RANBP3-229ENST00000592771 MAD2L2Q9UI95 211 aa16.26■□□□□ 0.19
RANBP3-229ENST00000592771 PCDHB6Q9Y5E3 794 aa16.26■□□□□ 0.19
RANBP3-229ENST00000592771 SCN9AQ15858 1988 aa16.26■□□□□ 0.19
RANBP3-229ENST00000592771 C7orf43Q8WVR3 580 aa16.25■□□□□ 0.19
RANBP3-229ENST00000592771 PPP1R13BQ96KQ4 1090 aa16.25■□□□□ 0.19
RANBP3-229ENST00000592771 BRMS1Q9HCU9 246 aa16.25■□□□□ 0.19
RANBP3-229ENST00000592771 CABP5Q9NP86 173 aa16.25■□□□□ 0.19
RANBP3-229ENST00000592771 SH3GLB2Q9NR46 395 aa16.25■□□□□ 0.19
RANBP3-229ENST00000592771 TRMT1Q9NXH9 659 aaKnown RBP16.25■□□□□ 0.19
RANBP3-229ENST00000592771 ZNF215Q9UL58 517 aaPredicted RBP16.25■□□□□ 0.19
RANBP3-229ENST00000592771 CEP131Q9UPN4 1083 aa16.25■□□□□ 0.19
RANBP3-229ENST00000592771 PALM3A6NDB9 673 aaPredicted RBP16.25■□□□□ 0.19
RANBP3-229ENST00000592771 KIF20AO95235 890 aa16.25■□□□□ 0.19
RANBP3-229ENST00000592771 GABPB1Q06547 395 aaPredicted RBP16.25■□□□□ 0.19
RANBP3-229ENST00000592771 SLC35G1Q2M3R5 365 aa16.25■□□□□ 0.19
RANBP3-229ENST00000592771 EARS2Q5JPH6 523 aaKnown RBP16.25■□□□□ 0.19
RANBP3-229ENST00000592771 KRBA2Q6ZNG9 492 aa16.25■□□□□ 0.19
RANBP3-229ENST00000592771 STAG2Q8N3U4 1231 aa16.25■□□□□ 0.19
RANBP3-229ENST00000592771 CNKSR1Q969H4 720 aa16.25■□□□□ 0.19
RANBP3-229ENST00000592771 MRIQ9BWK5 157 aa16.25■□□□□ 0.19
RANBP3-229ENST00000592771 SRPRBQ9Y5M8 271 aaKnown RBP16.25■□□□□ 0.19
RANBP3-229ENST00000592771 MYH8P13535 1937 aa16.24■□□□□ 0.19
RANBP3-229ENST00000592771 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.24■□□□□ 0.19
RANBP3-229ENST00000592771 FAM205CA6NFA0 338 aa16.24■□□□□ 0.19
RANBP3-229ENST00000592771 TRIM75PA6NK02 468 aa16.24■□□□□ 0.19
RANBP3-229ENST00000592771 BIN1O00499 593 aa16.24■□□□□ 0.19
RANBP3-229ENST00000592771 UBASH3AP57075 661 aa16.24■□□□□ 0.19
RANBP3-229ENST00000592771 FAM177A1Q8N128 213 aaPredicted RBP16.24■□□□□ 0.19
RANBP3-229ENST00000592771 FBXW7Q969H0 707 aa16.24■□□□□ 0.19
RANBP3-229ENST00000592771 MXD3Q9BW11 206 aa16.24■□□□□ 0.19
RANBP3-229ENST00000592771 HSD3B7Q9H2F3 369 aa16.24■□□□□ 0.19
RANBP3-229ENST00000592771 TMX1Q9H3N1 280 aa16.24■□□□□ 0.19
RANBP3-229ENST00000592771 DDX4Q9NQI0 724 aaKnown RBP16.24■□□□□ 0.19
RANBP3-229ENST00000592771 DACH1Q9UI36 760 aa16.24■□□□□ 0.19
RANBP3-229ENST00000592771 PHLPP2Q6ZVD8 1323 aa16.24■□□□□ 0.19
RANBP3-229ENST00000592771 C10orf71Q711Q0 1435 aa16.24■□□□□ 0.19
RANBP3-229ENST00000592771 BMP15O95972 392 aa16.23■□□□□ 0.19
RANBP3-229ENST00000592771 VEGFAP15692 232 aaPredicted RBP16.23■□□□□ 0.19
RANBP3-229ENST00000592771 CT47A1Q5JQC4 288 aaPredicted RBP16.23■□□□□ 0.19
RANBP3-229ENST00000592771 APOBEC3HQ6NTF7 200 aaKnown RBP16.23■□□□□ 0.19
RANBP3-229ENST00000592771 LZTS2Q9BRK4 669 aa16.23■□□□□ 0.19
RANBP3-229ENST00000592771 SRRTQ9BXP5 876 aaKnown RBP16.23■□□□□ 0.19
RANBP3-229ENST00000592771 PDGFDQ9GZP0 370 aaPredicted RBP16.23■□□□□ 0.19
RANBP3-229ENST00000592771 KCNH3Q9ULD8 1083 aa16.23■□□□□ 0.19
RANBP3-229ENST00000592771 MYO3BQ8WXR4 1341 aa16.23■□□□□ 0.19
RANBP3-229ENST00000592771 F8W031 263 aaPredicted RBP16.23■□□□□ 0.19
RANBP3-229ENST00000592771 FAM193AP78312 1265 aa16.23■□□□□ 0.19
RANBP3-229ENST00000592771 CCDC93Q567U6 631 aa16.23■□□□□ 0.19
RANBP3-229ENST00000592771 STRIP1Q5VSL9 837 aa16.23■□□□□ 0.19
RANBP3-229ENST00000592771 KANK3Q6NY19 840 aa16.23■□□□□ 0.19
RANBP3-229ENST00000592771 VSTM4Q8IW00 320 aa16.23■□□□□ 0.19
RANBP3-229ENST00000592771 TRIML1Q8N9V2 468 aa16.23■□□□□ 0.19
RANBP3-229ENST00000592771 TEKT1Q969V4 418 aa16.23■□□□□ 0.19
RANBP3-229ENST00000592771 STX8Q9UNK0 236 aa16.23■□□□□ 0.19
RANBP3-229ENST00000592771 GREB1LQ9C091 1923 aaPredicted RBP16.23■□□□□ 0.19
RANBP3-229ENST00000592771 SPDYE4A6NLX3 237 aa16.22■□□□□ 0.19
RANBP3-229ENST00000592771 G3V3G9 751 aa16.22■□□□□ 0.19
RANBP3-229ENST00000592771 CYTH3O43739 400 aa16.22■□□□□ 0.19
RANBP3-229ENST00000592771 SERPINC1P01008 464 aa16.22■□□□□ 0.19
RANBP3-229ENST00000592771 TOP1P11387 765 aaKnown RBP16.22■□□□□ 0.19
RANBP3-229ENST00000592771 CALML3P27482 149 aa16.22■□□□□ 0.19
RANBP3-229ENST00000592771 LMOD1P29536 600 aaPredicted RBP16.22■□□□□ 0.19
RANBP3-229ENST00000592771 CHRNA5P30532 468 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms