RNA–Protein interactions for RNA: ENST00000592412.5

CIRBP-238, Transcript of cold inducible RNA binding protein, humanhuman

TSL 4

Gene CIRBP, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-238ENST00000592412 PHF6Q8IWS0 365 aaKnown RBP eCLIP22.08■■□□□ 1.13
CIRBP-238ENST00000592412 FERMT2Q96AC1 680 aa22.08■■□□□ 1.13
CIRBP-238ENST00000592412 ARHGEF10LQ9HCE6 1279 aa22.08■■□□□ 1.13
CIRBP-238ENST00000592412 PRDM5Q9NQX1 630 aaPredicted RBP22.08■■□□□ 1.13
CIRBP-238ENST00000592412 FBXO28Q9NVF7 368 aa22.08■■□□□ 1.13
CIRBP-238ENST00000592412 ZNFX1Q9P2E3 1918 aaKnown RBP22.08■■□□□ 1.12
CIRBP-238ENST00000592412 WDR46O15213 610 aaKnown RBP22.07■■□□□ 1.12
CIRBP-238ENST00000592412 ITGB8P26012 769 aa22.07■■□□□ 1.12
CIRBP-238ENST00000592412 CDK8P49336 464 aa22.07■■□□□ 1.12
CIRBP-238ENST00000592412 ATP8A2Q9NTI2 1148 aa22.07■■□□□ 1.12
CIRBP-238ENST00000592412 PAG1Q9NWQ8 432 aa22.07■■□□□ 1.12
CIRBP-238ENST00000592412 SMCHD1A6NHR9 2005 aa22.06■■□□□ 1.12
CIRBP-238ENST00000592412 MYCNP04198 464 aaPredicted RBP22.06■■□□□ 1.12
CIRBP-238ENST00000592412 PGK2P07205 417 aa22.06■■□□□ 1.12
CIRBP-238ENST00000592412 IFIT2P09913 472 aaKnown RBP22.06■■□□□ 1.12
CIRBP-238ENST00000592412 FCER1AP12319 257 aa22.06■■□□□ 1.12
CIRBP-238ENST00000592412 ZNF697Q5TEC3 545 aa22.06■■□□□ 1.12
CIRBP-238ENST00000592412 C16orf86Q6ZW13 317 aa22.06■■□□□ 1.12
CIRBP-238ENST00000592412 BOLA2Q9H3K6 86 aa22.06■■□□□ 1.12
CIRBP-238ENST00000592412 SLC5A4Q9NY91 659 aa22.06■■□□□ 1.12
CIRBP-238ENST00000592412 ZBED9Q6R2W3 1325 aa22.06■■□□□ 1.12
CIRBP-238ENST00000592412 USP17L12C9JPN9 530 aa22.05■■□□□ 1.12
CIRBP-238ENST00000592412 USP17L21D6R901 530 aa22.05■■□□□ 1.12
CIRBP-238ENST00000592412 EEF2P13639 858 aaKnown RBP22.05■■□□□ 1.12
CIRBP-238ENST00000592412 TAL1P17542 331 aaPredicted RBP22.05■■□□□ 1.12
CIRBP-238ENST00000592412 SAMD1Q6SPF0 538 aaPredicted RBP22.05■■□□□ 1.12
CIRBP-238ENST00000592412 REPS2Q8NFH8 660 aa22.05■■□□□ 1.12
CIRBP-238ENST00000592412 CCDC17Q96LX7 622 aa22.05■■□□□ 1.12
CIRBP-238ENST00000592412 CDX2Q99626 313 aaPredicted RBP22.05■■□□□ 1.12
CIRBP-238ENST00000592412 SH2D4AQ9H788 454 aa22.05■■□□□ 1.12
CIRBP-238ENST00000592412 PHF24Q9UPV7 400 aa22.05■■□□□ 1.12
CIRBP-238ENST00000592412 MUC3AQ02505 3323 aa22.05■■□□□ 1.12
CIRBP-238ENST00000592412 GREB1LQ9C091 1923 aaPredicted RBP22.04■■□□□ 1.12
CIRBP-238ENST00000592412 ROBO3Q96MS0 1386 aa22.04■■□□□ 1.12
CIRBP-238ENST00000592412 SLC25A27O95847 323 aa22.04■■□□□ 1.12
CIRBP-238ENST00000592412 ATP5JP18859 108 aa22.04■■□□□ 1.12
CIRBP-238ENST00000592412 TLE2Q04725 743 aa22.04■■□□□ 1.12
CIRBP-238ENST00000592412 ZNF792Q3KQV3 632 aa22.04■■□□□ 1.12
CIRBP-238ENST00000592412 RIOX2Q8IUF8 465 aa22.04■■□□□ 1.12
CIRBP-238ENST00000592412 RPAP2Q8IXW5 612 aaPredicted RBP22.04■■□□□ 1.12
CIRBP-238ENST00000592412 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.04■■□□□ 1.12
CIRBP-238ENST00000592412 BCL11AQ9H165 835 aa22.04■■□□□ 1.12
CIRBP-238ENST00000592412 TTYH1Q9H313 450 aaPredicted RBP22.04■■□□□ 1.12
CIRBP-238ENST00000592412 SEMA6BQ9H3T3 888 aa22.04■■□□□ 1.12
CIRBP-238ENST00000592412 ZBTB40Q9NUA8 1239 aa22.04■■□□□ 1.12
CIRBP-238ENST00000592412 ZNF214Q9UL59 606 aaPredicted RBP22.04■■□□□ 1.12
CIRBP-238ENST00000592412 PLXNA1Q9UIW2 1896 aa22.04■■□□□ 1.12
CIRBP-238ENST00000592412 LENG1Q96BZ8 264 aaPredicted RBP22.03■■□□□ 1.12
CIRBP-238ENST00000592412 MMP19Q99542 508 aa22.03■■□□□ 1.12
CIRBP-238ENST00000592412 HAUS7Q99871 368 aa22.03■■□□□ 1.12
CIRBP-238ENST00000592412 TINF2Q9BSI4 451 aa22.03■■□□□ 1.12
CIRBP-238ENST00000592412 XPNPEP3Q9NQH7 507 aa22.03■■□□□ 1.12
CIRBP-238ENST00000592412 NRBP1Q9UHY1 535 aa22.03■■□□□ 1.12
CIRBP-238ENST00000592412 CHD9Q3L8U1 2897 aa22.02■■□□□ 1.12
CIRBP-238ENST00000592412 VWA5AO00534 786 aa22.02■■□□□ 1.12
CIRBP-238ENST00000592412 PGK1P00558 417 aa22.02■■□□□ 1.12
CIRBP-238ENST00000592412 ZNF865P0CJ78 1059 aaPredicted RBP22.02■■□□□ 1.12
CIRBP-238ENST00000592412 EPHB4P54760 987 aa22.02■■□□□ 1.12
CIRBP-238ENST00000592412 CTR9Q6PD62 1173 aa22.02■■□□□ 1.12
CIRBP-238ENST00000592412 PPP1R9AQ9ULJ8 1098 aa22.02■■□□□ 1.12
CIRBP-238ENST00000592412 MYH7P12883 1935 aa22.02■■□□□ 1.11
CIRBP-238ENST00000592412 RARBP10826 455 aa22.01■■□□□ 1.11
CIRBP-238ENST00000592412 SMAD3P84022 425 aaKnown RBP22.01■■□□□ 1.11
CIRBP-238ENST00000592412 UBE3CQ15386 1083 aa22.01■■□□□ 1.11
CIRBP-238ENST00000592412 FAM83BQ5T0W9 1011 aa22.01■■□□□ 1.11
CIRBP-238ENST00000592412 PUS7LQ9H0K6 701 aaKnown RBP22.01■■□□□ 1.11
CIRBP-238ENST00000592412 KANSL2Q9H9L4 492 aa22.01■■□□□ 1.11
CIRBP-238ENST00000592412 DIS3Q9Y2L1 958 aaKnown RBP22.01■■□□□ 1.11
CIRBP-238ENST00000592412 TTC28Q96AY4 2481 aa22■■□□□ 1.11
CIRBP-238ENST00000592412 RAB11FIP3O75154 756 aa22■■□□□ 1.11
CIRBP-238ENST00000592412 ADAMTS4O75173 837 aa22■■□□□ 1.11
CIRBP-238ENST00000592412 STAT3P40763 770 aa22■■□□□ 1.11
CIRBP-238ENST00000592412 COG6Q9Y2V7 657 aa22■■□□□ 1.11
CIRBP-238ENST00000592412 SLC4A4Q9Y6R1 1079 aa22■■□□□ 1.11
CIRBP-238ENST00000592412 A0A1W2PQ45 241 aaPredicted RBP21.99■■□□□ 1.11
CIRBP-238ENST00000592412 A0A1W2PQY0 241 aa21.99■■□□□ 1.11
CIRBP-238ENST00000592412 HMMRO75330 724 aa21.99■■□□□ 1.11
CIRBP-238ENST00000592412 CLTBP09497 229 aa21.99■■□□□ 1.11
CIRBP-238ENST00000592412 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.99■■□□□ 1.111e-7■■■□□ 16.8
CIRBP-238ENST00000592412 KIAA0355O15063 1070 aa21.98■■□□□ 1.11
CIRBP-238ENST00000592412 KCTD2Q14681 263 aa21.98■■□□□ 1.11
CIRBP-238ENST00000592412 RNF180Q86T96 592 aa21.98■■□□□ 1.11
CIRBP-238ENST00000592412 MYLIPQ8WY64 445 aa21.98■■□□□ 1.11
CIRBP-238ENST00000592412 NUP88Q99567 741 aaPredicted RBP21.98■■□□□ 1.11
CIRBP-238ENST00000592412 GOPCQ9HD26 462 aa21.98■■□□□ 1.11
CIRBP-238ENST00000592412 TACC3Q9Y6A5 838 aa21.98■■□□□ 1.11
CIRBP-238ENST00000592412 MIER1Q8N108 512 aa21.97■■□□□ 1.11
CIRBP-238ENST00000592412 MAFAQ8NHW3 353 aaPredicted RBP21.97■■□□□ 1.11
CIRBP-238ENST00000592412 DDX19BQ9UMR2 479 aa21.97■■□□□ 1.11
CIRBP-238ENST00000592412 RIPK3Q9Y572 518 aa21.97■■□□□ 1.11
CIRBP-238ENST00000592412 PQBP1O60828 265 aaKnown RBP21.96■■□□□ 1.11
CIRBP-238ENST00000592412 AKR1A1P14550 325 aa21.96■■□□□ 1.11
CIRBP-238ENST00000592412 RASA1P20936 1047 aa21.96■■□□□ 1.11
CIRBP-238ENST00000592412 AMOTL1Q8IY63 956 aa21.96■■□□□ 1.11
CIRBP-238ENST00000592412 SYNRGQ9UMZ2 1314 aa21.96■■□□□ 1.11
CIRBP-238ENST00000592412 DNAJC25-GNG10A0A024R161 153 aa21.95■■□□□ 1.1
CIRBP-238ENST00000592412 RAD21O60216 631 aa21.95■■□□□ 1.1
CIRBP-238ENST00000592412 SNAI1O95863 264 aaPredicted RBP21.95■■□□□ 1.1
CIRBP-238ENST00000592412 IRX5P78411 483 aaPredicted RBP21.95■■□□□ 1.1
CIRBP-238ENST00000592412 FAAP100Q0VG06 881 aa21.95■■□□□ 1.1
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