RNA–Protein interactions for RNA: ENST00000591584.1

VPS25-206, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 667 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-206ENST00000591584 RIOX1Q9H6W3 641 aa11.87□□□□□ -0.51
VPS25-206ENST00000591584 DACH1Q9UI36 760 aa11.87□□□□□ -0.51
VPS25-206ENST00000591584 HDAC9Q9UKV0 1011 aa11.87□□□□□ -0.51
VPS25-206ENST00000591584 SYNPO2Q9UMS6 1093 aa11.87□□□□□ -0.51
VPS25-206ENST00000591584 ZKSCAN5Q9Y2L8 839 aa11.87□□□□□ -0.51
VPS25-206ENST00000591584 SNED1Q8TER0 1413 aa11.86□□□□□ -0.51
VPS25-206ENST00000591584 CCDC194A0A1B0GVG4 234 aa11.86□□□□□ -0.51
VPS25-206ENST00000591584 IKBKBO14920 756 aa11.86□□□□□ -0.51
VPS25-206ENST00000591584 PPIP5K2O43314 1243 aa11.86□□□□□ -0.51
VPS25-206ENST00000591584 ZNF500O60304 480 aaPredicted RBP11.86□□□□□ -0.51
VPS25-206ENST00000591584 CHRNA5P30532 468 aa11.86□□□□□ -0.51
VPS25-206ENST00000591584 SCNN1DP51172 638 aa11.86□□□□□ -0.51
VPS25-206ENST00000591584 RBM5P52756 815 aaKnown RBP eCLIP11.86□□□□□ -0.51
VPS25-206ENST00000591584 SEMA3FQ13275 785 aa11.86□□□□□ -0.51
VPS25-206ENST00000591584 SLC4A8Q2Y0W8 1093 aa11.86□□□□□ -0.51
VPS25-206ENST00000591584 PPP1R18Q6NYC8 613 aa11.86□□□□□ -0.51
VPS25-206ENST00000591584 OLFM4Q6UX06 510 aa11.86□□□□□ -0.51
VPS25-206ENST00000591584 LUZP1Q86V48 1076 aa11.86□□□□□ -0.51
VPS25-206ENST00000591584 METTL16Q86W50 562 aaKnown RBP11.86□□□□□ -0.51
VPS25-206ENST00000591584 STAG2Q8N3U4 1231 aa11.86□□□□□ -0.51
VPS25-206ENST00000591584 ZMYND12Q9H0C1 365 aa11.86□□□□□ -0.51
VPS25-206ENST00000591584 KANSL2Q9H9L4 492 aa11.86□□□□□ -0.51
VPS25-206ENST00000591584 TMOD2Q9NZR1 351 aa11.86□□□□□ -0.51
VPS25-206ENST00000591584 DDX60LQ5H9U9 1706 aaKnown RBP11.86□□□□□ -0.51
VPS25-206ENST00000591584 COL2A1P02458 1487 aaPredicted RBP11.85□□□□□ -0.51
VPS25-206ENST00000591584 M0R2N6 131 aa11.85□□□□□ -0.51
VPS25-206ENST00000591584 SMC2O95347 1197 aa11.85□□□□□ -0.51
VPS25-206ENST00000591584 PDHBP11177 359 aa11.85□□□□□ -0.51
VPS25-206ENST00000591584 SHMT1P34896 483 aa11.85□□□□□ -0.51
VPS25-206ENST00000591584 LONP1P36776 959 aaKnown RBP11.85□□□□□ -0.51
VPS25-206ENST00000591584 PLCB2Q00722 1185 aa11.85□□□□□ -0.51
VPS25-206ENST00000591584 NT5DC1Q5TFE4 455 aa11.85□□□□□ -0.51
VPS25-206ENST00000591584 PIK3AP1Q6ZUJ8 805 aa11.85□□□□□ -0.51
VPS25-206ENST00000591584 KIAA0825Q8IV33 1275 aa11.85□□□□□ -0.51
VPS25-206ENST00000591584 TEX2Q8IWB9 1127 aa11.85□□□□□ -0.51
VPS25-206ENST00000591584 SHISA4Q96DD7 197 aa11.85□□□□□ -0.51
VPS25-206ENST00000591584 MRFAP1L1Q96HT8 127 aa11.85□□□□□ -0.51
VPS25-206ENST00000591584 CLIC6Q96NY7 704 aa11.85□□□□□ -0.51
VPS25-206ENST00000591584 TRIM5Q9C035 493 aa11.85□□□□□ -0.51
VPS25-206ENST00000591584 DDX4Q9NQI0 724 aaKnown RBP11.85□□□□□ -0.51
VPS25-206ENST00000591584 NYAP2Q9P242 653 aa11.85□□□□□ -0.51
VPS25-206ENST00000591584 COL11A2P13942 1736 aaPredicted RBP11.84□□□□□ -0.51
VPS25-206ENST00000591584 hCG_1642624A0A1W2PR95 340 aa11.84□□□□□ -0.51
VPS25-206ENST00000591584 STXBP3O00186 592 aa11.84□□□□□ -0.51
VPS25-206ENST00000591584 CYTH3O43739 400 aa11.84□□□□□ -0.51
VPS25-206ENST00000591584 AKR1B1P15121 316 aa11.84□□□□□ -0.51
VPS25-206ENST00000591584 ATP2B1P20020 1258 aa11.84□□□□□ -0.51
VPS25-206ENST00000591584 TXLNAP40222 546 aa11.84□□□□□ -0.51
VPS25-206ENST00000591584 PRPHP41219 470 aa11.84□□□□□ -0.51
VPS25-206ENST00000591584 AOC3Q16853 763 aa11.84□□□□□ -0.51
VPS25-206ENST00000591584 WWC2Q6AWC2 1192 aa11.84□□□□□ -0.51
VPS25-206ENST00000591584 TATDN1Q6P1N9 297 aa11.84□□□□□ -0.51
VPS25-206ENST00000591584 RSBN1LQ6PCB5 846 aaPredicted RBP11.84□□□□□ -0.51
VPS25-206ENST00000591584 HEATR3Q7Z4Q2 680 aa11.84□□□□□ -0.51
VPS25-206ENST00000591584 PLA2G4DQ86XP0 818 aa11.84□□□□□ -0.51
VPS25-206ENST00000591584 MLKLQ8NB16 471 aa11.84□□□□□ -0.51
VPS25-206ENST00000591584 CSRNP2Q9H175 543 aa11.84□□□□□ -0.51
VPS25-206ENST00000591584 RRAGDQ9NQL2 400 aaPredicted RBP11.84□□□□□ -0.51
VPS25-206ENST00000591584 CLIP2Q9UDT6 1046 aa11.84□□□□□ -0.51
VPS25-206ENST00000591584 PCDHA6Q9UN73 950 aa11.84□□□□□ -0.51
VPS25-206ENST00000591584 PCDHA8Q9Y5H6 950 aa11.84□□□□□ -0.51
VPS25-206ENST00000591584 ATRNL1Q5VV63 1379 aa11.83□□□□□ -0.52
VPS25-206ENST00000591584 PNMA6FA0A0J9YX94 578 aa11.83□□□□□ -0.52
VPS25-206ENST00000591584 SMCO2A6NFE2 343 aa11.83□□□□□ -0.52
VPS25-206ENST00000591584 C21orf2O43822 256 aa11.83□□□□□ -0.52
VPS25-206ENST00000591584 NEMFO60524 1076 aa11.83□□□□□ -0.52
VPS25-206ENST00000591584 VIL1P09327 827 aaKnown RBP11.83□□□□□ -0.52
VPS25-206ENST00000591584 SLFN14P0C7P3 912 aa11.83□□□□□ -0.52
VPS25-206ENST00000591584 SARSP49591 514 aaKnown RBP11.83□□□□□ -0.52
VPS25-206ENST00000591584 ZNF75DP51815 510 aa11.83□□□□□ -0.52
VPS25-206ENST00000591584 NAPAP54920 295 aa11.83□□□□□ -0.52
VPS25-206ENST00000591584 MDM2Q00987 491 aaPredicted RBP11.83□□□□□ -0.52
VPS25-206ENST00000591584 ZNF543Q08ER8 600 aa11.83□□□□□ -0.52
VPS25-206ENST00000591584 PTGDRQ13258 359 aa11.83□□□□□ -0.52
VPS25-206ENST00000591584 POSTNQ15063 836 aa11.83□□□□□ -0.52
VPS25-206ENST00000591584 ZNF174Q15697 407 aa11.83□□□□□ -0.52
VPS25-206ENST00000591584 LONRF3Q496Y0 759 aa11.83□□□□□ -0.52
VPS25-206ENST00000591584 CERKLQ49MI3 558 aaPredicted RBP11.83□□□□□ -0.52
VPS25-206ENST00000591584 FKBP1CQ5VVH2 108 aa11.83□□□□□ -0.52
VPS25-206ENST00000591584 MCTP2Q6DN12 878 aa11.83□□□□□ -0.52
VPS25-206ENST00000591584 USP17L2Q6R6M4 530 aa11.83□□□□□ -0.52
VPS25-206ENST00000591584 TMEM179Q6ZVK1 233 aa11.83□□□□□ -0.52
VPS25-206ENST00000591584 DHX40Q8IX18 779 aaKnown RBP11.83□□□□□ -0.52
VPS25-206ENST00000591584 OGFOD1Q8N543 542 aa11.83□□□□□ -0.52
VPS25-206ENST00000591584 IQUBQ8NA54 791 aa11.83□□□□□ -0.52
VPS25-206ENST00000591584 AGBL3Q8NEM8 1001 aa11.83□□□□□ -0.52
VPS25-206ENST00000591584 DCAF4Q8WV16 495 aa11.83□□□□□ -0.52
VPS25-206ENST00000591584 SMARCE1Q969G3 411 aa11.83□□□□□ -0.52
VPS25-206ENST00000591584 AK8Q96MA6 479 aa11.83□□□□□ -0.52
VPS25-206ENST00000591584 NAP1L4Q99733 375 aaKnown RBP11.83□□□□□ -0.52
VPS25-206ENST00000591584 MXD3Q9BW11 206 aa11.83□□□□□ -0.52
VPS25-206ENST00000591584 HERC5Q9UII4 1024 aaKnown RBP11.83□□□□□ -0.52
VPS25-206ENST00000591584 FOCADQ5VW36 1801 aa11.83□□□□□ -0.52
VPS25-206ENST00000591584 MYH1P12882 1939 aa11.82□□□□□ -0.52
VPS25-206ENST00000591584 ECM29Q5VYK3 1845 aa11.82□□□□□ -0.52
VPS25-206ENST00000591584 USP17L5A8MUK1 530 aa11.82□□□□□ -0.52
VPS25-206ENST00000591584 POLR2DO15514 142 aaKnown RBP11.82□□□□□ -0.52
VPS25-206ENST00000591584 MYL1P05976 194 aa11.82□□□□□ -0.52
VPS25-206ENST00000591584 POLD1P28340 1107 aa11.82□□□□□ -0.52
VPS25-206ENST00000591584 NFIAQ12857 509 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms